New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4587306 =	114 (1.220)	6 (0.070)	5/234	NT	5.4%	coding (555/1683 nt)	PP_4063	long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	4587342 =	104 (1.190)					coding (519/1683 nt)	PP_4063	long‑chain fatty acid‑‑CoA ligase

ACCATGGTGCAGGAGCTGGTGCCTGAACTGGCCAGTGCCGCGCCTGGTGAGCTGGCCAGTGAATGCCTGCCCGAGTTGCGTGGCGTCATCAGCCTGGCCGCCAACCCGCCTGCCGGCTTCCTGCCCTGGCACGCATTTGCCGAGCGGGCAGGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4587461‑4587306 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagggcagGAAGCCGGCAGGCGGGTTGGCGGCCAGGCTGATGACGCCACGCAACTCGGGCAGGCATTCACTGGCCAGCTCACCAGGCGCGGCACTGGCCAGTTCAGGCACCAGCTCCTGCACCATGGTGTGGTAATCAGACGTCTTGAAGGCTTCA  >  NC_002947/4587342‑4587489                                                                                                                                                                                                                                                                                                                  ACCATGGTGCAGGAGCTGGTGCCTGAACTGGCCAGTGCCGCGCCTGGTGAGCTGGCCAGTGAATGCCTGCCCGAGTTGCGTGGCGTCATCAGCCTGGCCGCCAACCCGCCTGCCGGCTTCCTGCCCTGGCACGCATTTGCCGAGCGGGCA                                                                                                                                                            <  2:1860649/150‑1  CCATGGTGCAGGAGCTGGTGCCTGAACTGGCCAGTGCCGCGCCTGGTGAGCTGGCCAGTGAATGCCTGCCCGAGTTGCGTGGCGTCATCAGCCTGGCCGCCAACCCGCCTGCCGGCTTCCTGCCCTGGCACGCATTTGCCGAGCGGGCAG                                                                                                                                                           <  2:2238184/150‑1    ATGGTGCAGGAGCTGGTGCCTGAACTGGCCAGTGCCGCGCCTGGTGAGCTGACCAGTGAATGCCTGCCCGAGTTGCGTGGCGTCATCAGCCTGGCCGCCAACCCGCCTGCCGGCTTCCTGCCCTGGCACGCATTTGCCGAGCGGGCAGGG                                                                                                                                                         <  2:1917153/150‑1      GGTGCAGGAGCTGGTGCCTGAACTGGCCAGTGCCGCGCCTGGTGAGCTGGCCAGTGAATGCCTGCCCGAGTTGCGTGGCGTCATCAGCCTGGCCGCCAACCCGCCTGCCGGCTTCCTGCCCTGGCACGCATTTGCCGAGCGGGCAGGGCA                                                                                                                                                       <  2:976716/150‑1                                                                                                                  CGGCTTCCTGCCCTGGCACGCATTTGCCGAGC‑‑‑‑‑GGGCAGGAAGCCGGCAGGCGGGTTGGCGGCCAGGCTGATGACGCCACGCAACTCGGGCAGGCATTCACTGGCCAGCTCACCAGGCGCGGCACTGGCCAGTTCAGGCACCAGCTCCTGC                                      >  2:631496/1‑150                                                                                                                          TGCCCTGGCACGCATTTGCCGAGC‑‑‑‑‑GGGCAGGAAGCCGGCAGGCGGGTTGGCGGCCAGGCTGATGGCGCCACGCAACTCGGGCAGGCATTCACTGGCCAGCTCACCAGGCGCGGCACTGGCCAGTTCAGGCACCAGCTCCTGCACCATGGT                              >  1:922001/1‑150                                                                                                                             CCTGGCACGCATTTGCCGAGCGGGCAGGGCAGGAAGCCGGCAGGCGGGTTGGCGGCCAGGCTGATGACGCCACGCAACTCGGGCAGGCATTCACTG                                                                                      >  1:1980931/1‑96                                                                                                                             CCTGGCACGCATTTGCCGAGCGGGCAGGGCAGGAAGCCGGCAGGCGGGTTGGCGGCCAGGCTGATGACGCCACGCAACTCGGGCAGGCATTCACTG                                                                                      <  2:1980931/96‑1                                                                                                                              CTGGCACGCATTTGCCGAGCGGGCAGGGCAGGAAGCCGGCAGGCGGGTTGGCGGCCAGGCTGATGACGCCACGCAACTCGGGCAGGCATTCACTG                                                                                      >  1:1128760/1‑95                                                                                                                              CTGGCACGCATTTGCCGAGCGGGCAGGGCAGGAAGCCGGCAGGCGGGTTGGCGGCCAGGCTGATGACGCCACGCAACTCGGGCAGGCATTCACTG                                                                                      <  2:1128760/95‑1                                                                                                                                                      AGGGCAGGAAGCCGGCAGGCGGGTTGGCGGCCAGGCTGATGACGCCACGCAACTCGGGCAGGCATTCACTGGCCAGCTCACCAGGCGCGGCACTGGCCAGTTCAGGCACCAGCTCCTGCACCATGGTGTGGTAATCAGACGTCTTGAAGG       >  2:668123/1‑150                                                                                                                                                      AGGGCAGGAAGCCGGCAGGCGGGTTGGCGGCCAGGCTGATGACGCCACGCAACTCGGGCAGGCATTCACTGGCCAGCTCACCAGGCGCGGCACTGGCCAGTTCAGGCACCAGCTCCTGCACCATGGTGTGGTAATCAGACGTCTTGAAGG       >  2:681461/1‑150                                                                                                                                                       GGGCAGGAAGCCGGCAGGCGGGTTGGCGGCCAGGCTGATGACGCCACGCAACTCGGGCAGGCATTCACTGGCCAGCTCACCAGGCGCGGCACTGGCCAGTTCAGGCACCAGCTCCTGCACCATGGTGTGGTAATCAGACGTCTTGAAGGC      <  1:1860649/150‑1                                                                                                                                                         GCAGGAAGCCGGCAGGCGGGTTGGCGGCCAGGCTGATGACGCCACGCAACTCGGGCAGGCATTCACTGGCCAGCTCACCAGGCGCGGCACTGGCCAGTTCAGGCACCAGCTCCTGCACCATGGTGTGGTAATCAGACGTCTTGAAGGCTT    <  2:495043/150‑1                                                                                                                                                           AGGAAGCCGGCAGGCGGGTTGGCGGCCAGGCTGATGACGCCCCGCAACTCGGGCAGGCATTCACTGGCCAGCTCACCAGGCGCGGCACTGGCCAGTTCAGGCACCAGCTCCTGCACCATGGTGTGGTAATCAGACGTCTTGAAGGCTTCA  <  2:1462521/150‑1                                                                                                                                                                                                                                                                                                                  ACCATGGTGCAGGAGCTGGTGCCTGAACTGGCCAGTGCCGCGCCTGGTGAGCTGGCCAGTGAATGCCTGCCCGAGTTGCGTGGCGTCATCAGCCTGGCCGCCAACCCGCCTGCCGGCTTCCTGCCCTGGCACGCATTTGCCGAGCGGGCAGGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4587461‑4587306 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagggcagGAAGCCGGCAGGCGGGTTGGCGGCCAGGCTGATGACGCCACGCAACTCGGGCAGGCATTCACTGGCCAGCTCACCAGGCGCGGCACTGGCCAGTTCAGGCACCAGCTCCTGCACCATGGTGTGGTAATCAGACGTCTTGAAGGCTTCA  >  NC_002947/4587342‑4587489

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.