| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4659957 | 69 (0.740) | 4 (0.040) | 4/240 | NT | 5.5% | coding (269/1362 nt) | nuoF | NADH‑quinone oxidoreductase subunit F |
| ? | NC_002947 | = 4659991 | 72 (0.800) | coding (303/1362 nt) | nuoF | NADH‑quinone oxidoreductase subunit F | |||||
CGAAGAACGGCTACGCCGCAGCCCGCAAGGCGCTGGCGCAAATGTCCGCCGACGACATCGTGCAGAGCGTCAAGGACTCCGGCCTCAAAGGCCGTGGCGGTGCAGGTTTCCCCACTGGCGTGAAGTGGGGCCTGATGCCCAAAGACGAATCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4659804‑4659957‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccatTTCGTCCGCGTTGCACAGCAGGTAGCGGATGTTCATGGATTCGTCTTTGGGCATCAGGCCCCACTTCACGCCAGTGGGGAAACCTGCACCGCCACGGCCTTTGAGGCCGGAGTCCTTGACGCTCTGCACGATGTCGTCGGCGGACATTT < NC_002947/4659991‑4659843 CGAAGAACGGCTACGCCGCAGCCCGCAAGGCGCTGGCGCAAATGTCCGCCGACGACATCGTGCAGAGCGTCAAGGACTCCGGCCTCAAAGGCCGTGGCGGTGCAGGTTTCCCCACTGGCGTGAAGTGGGGCCTGATGCCCAAAGACGAAT > 1:2436607/1‑150CGAAGAACGGCTACGCCGCAGCCCGCAAGGCGCTGGCGCAAATGTCCGCCGACGACATCGTGCAGAGCGTCAAGGACTCCGGCCTCAAAGGCCGTGGCGGTGCAGGTTTCCCCACTGGCGTGAAGTGGGGCCTGATGCCCAAAGACGAAT < 2:2148011/150‑1 GAAGAACGGCTACGCCGCAGCCCGCAAGGCGCTGGCGCAAATGTCCGCCGACGACATCGTGCAGAGCGTCAAGGACTCCGGCGTCAAAGGCCGTGGCGGTGCAGGTTTCCCCACTGGCGTGAAGTGGGGCCTGATGCCCAAAGACGAATC > 2:1301036/1‑150 AGAACGGCTACGCCGCAGCCCGCAAGGCGCTGGCGCAAATGTCCGCCGACGACATCGTGCAGAGCGTCAAGGACTCCAGCATAAAAGGCCGTGGCGGTGCAGGTTCCCCCACTTGCGTTAAGTGGGGCCTGATGCCCAAAGACGAATCCA < 1:1994220/150‑1 GAACGGCTACGCCGCAGCCCGCAAGGCGCTGGCGCAAATGTCCGCCGACGACATCGTGCAGAGCGTCAAGGACTCCGGCCTCAAAGGCCGTGGCGGTGCAGGTTTCCCCACTGGCGTGAAGTGGGGCCTGATGCCCAAAGACGAATCCAT < 1:1336418/150‑1 CCGCAGCCCGCAAGGCGCTGGCGCAAATGTCCGCCGACGACATCGTGCAGAGCGTCAAGGACTCCGGCCTCAAAGGCCGTGGCGGTGCAGGTTTCCCCACTGGCGTGAAGTGGGGCCTGATGCCCAAAGACGAAT > 1:1787026/1‑135 CCGCAGCCCGCAAGGCGCTGGCGCAAATGTCCGCCGACGACATCGTGCAGAGCGTCAAGGACTCCGGCCTCAAAGGCCGTGGCGGTGCAGGTTTCCCCACTGGCGTGAAGTGGGGCCTGATGCCCAAAGACGAAT < 2:1787026/135‑1 ACGACATCGTGCAGAGCGTCAAGGACTCCGGCCTCAAAGGCCGTGGCGGTGCAGGTTTCCCCACTGGCGTGAAGTGGGGCCTGATGCCCAAAGACGAATCCATTTCGTCCGCGTTGCACAGCAGGTAGCGGATGTTCATGGATTCGTCTT > 2:1619202/1‑150 ACGACATCGTGCAGAGCGTCAAGGACTCCGGCCTCAAAGGCCGTGGCGGTGCAGGTTTCCCCACTGGCGTGAAGTGGGGCCTGATGCCCAAAGACGAATCCAT < 1:2445569/103‑1 ACGACATCGTGCAGAGCGTCAAGGACTCCGGCCTCAAAGGCCGTGGCGGTGCAGGTTTCCCCACTGGCGTGAAGTGGGGCCTGATGCCCAAAGACGAATCCAT > 2:2445569/1‑103 ACATCGTGCAGAGCGTCAAGGACTCCGGCCTCAAAGGCCGTGGCGGTGCAGGTTTCCCCACTGGCGTGAAGTGGGGCCTGATGCCCAAAGACGAATCCATTTCGTCCGCGTTGCACAGCAGGTAGCGGATGTTCATGGATTCGTCTTTGG < 1:1619202/150‑1 CCACTGGCGTGAAGTGGGGCCTGATGCCCAAAGACGAATCCATTTCGTCCGCGTTGCACAGCAGGTAGCGGATGTTCATGGATTC < 1:965294/85‑1 CCACTGGCGTGAAGTGGGGCCTGATGCCCAAAGACGAATCCATTTCGTCCGCGTTGCACAGCAGGTAGCGGATGTTCATGGATTC > 2:965294/1‑85 TTTCGTCCGCGTTGCACAGCAGGTAGCGGATGTTCATGGATTCGTCTTTGGGCATCAGGCCCCACTTCACGCCAGTGGGGAAACCTGCACCGCCACGGCCTTTGAGGCCGGAGTCCTTGACGCTCTGCACGATGTCGTCGGCGGACATTT > 2:622390/1‑150 CGAAGAACGGCTACGCCGCAGCCCGCAAGGCGCTGGCGCAAATGTCCGCCGACGACATCGTGCAGAGCGTCAAGGACTCCGGCCTCAAAGGCCGTGGCGGTGCAGGTTTCCCCACTGGCGTGAAGTGGGGCCTGATGCCCAAAGACGAATCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4659804‑4659957‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccatTTCGTCCGCGTTGCACAGCAGGTAGCGGATGTTCATGGATTCGTCTTTGGGCATCAGGCCCCACTTCACGCCAGTGGGGAAACCTGCACCGCCACGGCCTTTGAGGCCGGAGTCCTTGACGCTCTGCACGATGTCGTCGGCGGACATTT < NC_002947/4659991‑4659843 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |