| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4761629 | 113 (1.210) | 6 (0.070) | 4/236 | NT | 5.4% | coding (243/1287 nt) | pvdN | pyoverdine biosynthesis‑like protein |
| ? | NC_002947 | = 4761647 | 103 (1.170) | coding (261/1287 nt) | pvdN | pyoverdine biosynthesis‑like protein | |||||
GCGGCGCCGCGCACGCCTCCGGCCACGGATGCCTGGAGCGGTTTTCGCCAACTGTTCGAGCTCGACCCCCACTACGCGCACTTCGCCAACTTCCTCATCACCTCGCACCCGCGCCCCGTGCGCGAAGCGATCGCAAGCCTTCGCGCACAACTCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4761474‑4761629‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actcgacGCAGCGTGCCGGGTGTTGGTCGAGTTGTGCGCGAAGGCTTGCGATCGCTTCGCGCACGGGGCGCGGGTGCGAGGTGATGAGGAAGTTGGCGAAGTGCGCGTAGTGGGGGTCGAGCTCGAACAGTTGGCGAAAACCGCTCCAGGCATC < NC_002947/4761647‑4761501 GCGGCGCCGCGCACGCCTCCGGCCACGGATGCCTGGAGCGGTTTTCGCCAACTGTTCGAGCTCGACCCCCACTACGCGCACTTCGCCAACTTCCTCATCACCTCGCACCCGCGCCCCGTGCGCGAAGCGATCGCAAGCCTTCGCGCACAA > 1:923753/1‑150 CGGCGCCGCGCACGCCTCCGGCCACCGCTGCCTGGAGCGGTCTTCGCCAACTGTTCGAGCTCGCCCCCCACTACGCGCACTTCGCCAACTTCCTCATCACCTCGCACCCGCGCCCCGTGCGCGAAGCGATCGCAAGCCTTCGCGCACAAC < 1:1980913/150‑1 GCCGCGCACGCCTCCGGCCACGGATGCCTGGAGCGGTTTTCGCCAACTGTTCGAGCTCGACCCCCACTACGCGCACTTCGCCAACTTCCTCATCACCTCGCACCCGCGCCCCGTGCGCGAAGCGATCGCAAGCCTTCGCGCACAACTCGA < 1:1220505/150‑1 CCGCGCACGCCTCCGGCCACGGATGCCTGGAGCGGTTTTCGCCAACTGTTCGAGCTCGACCCCCACTACGCGCACTTCGCCAACTTCCTCATCACCTCGCACCCGCGCCCCGTGCGCGAAGCGATCGCAAGCCTTCGCGCACAACTCGAC < 2:697200/150‑1 CCGCGCACGCCTCCGGCCACGGATGCCTGGAGCGGTTTTCGCCAACTGTTCGAGCTCGACCCCCACTACGCGCACTTCGCCAACTTCCTCATCACCTCGCACCCGCGCCCCGTGCGCGAAGCGATCGCAAGCCTTCGCGCACAACTCGAC < 1:48019/150‑1 GCACGCCTCCGGCCACGGATGCCTGGAGCGGTTTTCGCCAACTGTTCGAGCTCGACCCCCACTACGCGCACTTCGCCAACTTCCTCATCACCTCGCACCCGCGCCCCGTGCGCGAAGCGATCGCAAGCCTTCGCGCACAACTCGACaaac > 1:1462661/1‑146 TCCGGCCACGGATGCCTGGAGCGGTTTTCGCCAACTGTTCGAGCTCGACCCCCACTACGCGCACTTCGCCAACTTCCTCATCACCTCGCACCCGCGCCCCGTGCGCGAAGCGATCGCAAGCCTTCGCGCACAA < 1:1150971/133‑1 TCCGGCCACGGATGCCTGGAGCGGTTTTCGCCAACTGTTCGAGCTCGACCCCCACTACGCGCACTTCGCCAACTTCCTCATCACCTCGCACCCGCGCCCCGTGCGCGAAGCGATCGCAAGCCTTCGCGCACAA > 2:1150971/1‑133 GGAGCGGTTTTCGCCAACTGTTCGAGCTCGACCCCCACTACGCGCACTTCGCCAACTTCCTCATCACCTCGCACCCGCGCCCCGTGCGCGAAGCGATCGCAAGCCTTCGCGCACAACTCGACGCAGCGTGCCGGGTGTTGGTCGAGTTGT < 2:1404608/150‑1 AGCGGTTTTCGCCAACTGTTCGAGCTCGACCCCCACTACGCGCACTTCGCCAACTTCCTCATCACCTCGCACCCGCGCCCCGTGCGCGAAGCGATCGCAAGCCTTCGCGCACAACTCGACGCAGCGTGCCGGGTGTTGGTCGAGTTGTGC < 1:1762183/150‑1 TTCGAGCTCGACCCCCACTACGCGCACTTCGCCAACTTCCTCATCACCTCGCACCCGCGCCCCGTGCGCGAAGCGATCGCAAGCCTTCGCGCACAACTCGACGCAGCGTGCCGGGTGTTGGTCGAGTTGT < 2:976494/130‑1 TTCGAGCTCGACCCCCACTACGCGCACTTCGCCAACTTCCTCATCACCTCGCACCCGCGCCCCGTGCGCGAAGCGATCGCAAGCCTTCGCGCACAACTCGACGCAGCGTGCCGGGTGTTGGTCGAGTTGT > 1:976494/1‑130 TCGACCCCCACTACGCGCACTTCGCCAACTTCCTCATCACCTCGCACCCGCGCCCCGTGCGCGAAGCGATCGCAAGCCTTCGCGCACAACTCGACGCAGCGTGCCGGGTGTTGGTCGAGTTGTGC > 1:973512/1‑125 TCGACCCCCACTACGCGCACTTCGCCAACTTCCTCATCACCTCGCACCCGCGCCCCGTGCGCGAAGCGATCGCAAGCCTTCGCGCACAACTCGACGCAGCGTGCCGGGTGTTGGTCGAGTTGTGC < 2:973512/125‑1 GACCCCCACTACGCGCACTTCGCCAACTTCCTCATCACCTCGCACCCGCGCCCCGTGCGCGAAGCGATCGCAAGCCTTCGCGCACAACTCGA > 1:424630/1‑92 GACCCCCACTACGCGCACTTCGCCAACTTCCTCATCACCTCGCACCCGCGCCCCGTGCGCGAAGCGATCGCAAGCCTTCGCGCACAACTCGA < 2:424630/92‑1 CATCACCTCGCACCCGCGCCCCGTGCGCGAAGCGATCGCAAGCCTTCGCGCACAACTC > 2:1369498/1‑58 CATCACCTCGCACCCGCGCCCCGTGCGCGAAGCGATCGCAAGCCTTCGCGCACAACTC < 1:1369498/58‑1 ACTCGACGCAGCGTGCCGGGTGTTGGTCGAGTTGTGCGCGAAGGCTTGCGATCGCTTCGCGCACGGGGCGCGGGTGCGAGGTGATGAGGAAGTTGGCGAAGTGCGCGTAGTGGGGGTCGAGCTCGAACAGTTGGCGAAAACCGCTCCAGG > 1:2161107/1‑150 ACTCGACGCAGCGTGCCGGGTGTTGGTCGAGTTGTGCGCGAAGGCTTGCGATCGCTTCGCGCACGGGGCGCGGGTGCGAGGTGATGAGGAAGTTGGCGAAGTGCGCGTAGTGGGGGTCGAGCTCGAACAGTTGGCGAAAACCGCTCCAGG > 2:1655971/1‑150 ACTCGACGCAGCGTGCCGGGTGTTGGTCGAGTTGTGCGCGAAGGCTTGCGATCGCTTCGCGCACGGGGCGCGGGTGCGAGGTGATGAGGAAGTTGGCGAAGTGCGCGTAGTGGGGGTCGAGCTCGAACAGTTGGCGAAAACCGCTCCAG < 2:1735422/149‑1 ACTCGACGCAGCGTGCCGGGTGTTGGTCGAGTTGTGCGCGAAGGCTTGCGATCGCTTCGCGCACGGGGCGCGGGTGCGAGGTGATGAGGAAGTTGGCGAAGTGCGCGTAGTGGGGGTCGAGCTCGAACAGTTGGCGAAAACCGCTCCAG > 1:1735422/1‑149 CTCGACGCAGCGTGCCGGGTGTTGGTCGAGTTGTGCGCGAAGGCTTGCGATCGCTTCGCGCACGGGGCGCGGGTGCGAGGTGATGAGGAAGTTGGCGAAGTGCGCGTAGTGGGGGTCGAGCTCGAACAGTTGGCGAAAACCGCTCCAGGC > 2:1171169/1‑150 CTCGACGCAGCGTGCCGGGTGTTGGTCGAGTTGTGCGCGAAGGCTTGCGATCGCTTCGCGCACGGGGCGCGGGTGCGAGGTGATGAGGAAGTTGGCGAAGTGCGCGTAGTGGGGGTCGAGCTCGAACAGTTGGCGAAAACCGCTCCAGGC > 2:417761/1‑150 CTCGACGCAGCGTGCCGGGTGTTGGTCGAGTTGTGCGCGAAGGCTTGCGATCGCTTCGCGCACGGGGCGCGGGTGCGAGGTGATGAGGAAGTTGGCGAAGTGCGCGTAGTGGGGGTCGAGCTCGAACAGTTGGCGAAAACCGCTCCAGGC < 2:679115/150‑1 GACGCAGCGTGCCGGGTGTTGGTCGAGTTGTGCGCGAAGGCTTGCGATCGCTTCGCGCACGGGGCGCGGGTGCGAGGTGATGAGGAAGTTGGCGAAGTGCGCGTAGTGGGGGTCGAGCTCGAACAGTTGGCGAAAACCGCTCCAGGCATC > 1:732068/1‑150 GCGGCGCCGCGCACGCCTCCGGCCACGGATGCCTGGAGCGGTTTTCGCCAACTGTTCGAGCTCGACCCCCACTACGCGCACTTCGCCAACTTCCTCATCACCTCGCACCCGCGCCCCGTGCGCGAAGCGATCGCAAGCCTTCGCGCACAACTCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4761474‑4761629‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actcgacGCAGCGTGCCGGGTGTTGGTCGAGTTGTGCGCGAAGGCTTGCGATCGCTTCGCGCACGGGGCGCGGGTGCGAGGTGATGAGGAAGTTGGCGAAGTGCGCGTAGTGGGGGTCGAGCTCGAACAGTTGGCGAAAACCGCTCCAGGCATC < NC_002947/4761647‑4761501 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |