| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5114385 = | 93 (1.000) | 6 (0.070) | 3/238 | NT | 6.4% | coding (611/666 nt) | yciO | maturation protein |
| ? | NC_002947 | 5114437 = | 86 (0.970) | coding (559/666 nt) | yciO | maturation protein | |||||
CCGACCCTTACGAGATCCGTGAACGGCTGGAGCACCATGTTGACCTGGTGATCGATGGCGGGTTCGGCGACCTCAAGGCGTCGACCATCATCGACCTGTCCGGCGACGAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5114496‑5114385‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaaccCGCCATCGATCACCAGGTCAACATGGTGCTCCAGCCGTTCACGGATCTCGTAAGGGTCGGTCATCGGCTCGCTGTCGCCCGGCAGGATCAGGCTGACGCTCATCAGTGGCTCGCCCAACTCGGCCAGCAAGGCCAGGGTGATGGCATGG > NC_002947/5114437‑5114585 CCGACCCTTACGAGATCCGTGAACGGCTGGAGCACCATGTTGGCCTGGTGATCGATGGCGGGTTCGGCGACCTCAAGGCGTCGACCATCATCGACCTGTCCGGCGAC > 1:122115/1‑107CCGACCCTTACGAGATCCGTGAACGGCTGGAGCACCATGTTGGCCTGGTGATCGATGGCGGGTTCGGCGACCTCAAGGCGTCGACCATCATCGACCTGTCCGGCGAC < 2:122115/107‑1 GTTCGGCGACCTCAAGGCGTCGACCATCATCGACCTGTCCGGCGACGAACCCGCCATCGATCACCATGTCAACATGGTGCTCCAGCCGTTCACGGATCTCGTAAGGGTCGGTCATCGGCTCGC < 1:1726749/123‑1 GTTCGGCGACCTCAAGGCGTCGACCATCATCGACCTGTCCGGCGACGAACCCGCCATCGATCACCATGTCAACATGGTGCTCCAGCCGTTCACGGATCTCGTAAGGGTCGGTCATCGGCTCGC < 1:511725/123‑1 GTTCGGCGACCTCAAGGCGTCGACCATCATCGACCTGTCCGGCGACGAACCCGCCATCGATCACCATGTCAACATGGTGCTCCAGCCGTTCACGGATCTCGTAAGGGTCGGTCATCGGCTCGC > 2:1726749/1‑123 GTTCGGCGACCTCAAGGCGTCGACCATCATCGACCTGTCCGGCGACGAACCCGCCATCGATCACCATGTCAACATGGTGCTCCAGCCGTTCACGGATCTCGTAAGGGTCGGTCATCGGCTCGC > 2:511725/1‑123 GTTCGGCGACCTCAAGGCGTCGACCATCATCGACCTGTCCGGCGACGAACCCGCCATCGATCACCAGGTCAACATGGTGCTCCAGCCGTTCACGGATCTCGTAAGGGTCGGTCATCGGCTCGCTGTCGCCCGGCAGGATCAGGCTGACGC > 1:1701469/1‑150 GACCTCAAGGCGTCGACCATCATCGACCTGTCCGGCGACGAACCCGCCATCGATCACCAGGTCAACATGGTGCTCCAGCCGTTCACGGATCTCGTAAGGGTCGGTCATCGGCTCGCTGTCGCCCGGCAGGATCAGGCTGACGCTCATCAG < 2:1701469/150‑1 GAACCCGCCATCGATCACCAGGTCAACATGGTGCTCCAGCCGTTCACGGATCTCGTAAGGGTCGGTCA > 1:1270423/1‑68 GAACCCGCCATCGATCACCAGGTCAACATGGTGCTCCAGCCGTTCACGGATCTCGTAAGGGTCGGTCA < 2:1270423/68‑1 ACCCGCCATCGATCACCAGGTCAACATGGTGCTCCAGCCGTTCACGGATCTCGTAAGGGTCGGTCATCGGCTCGCTGTCGCCCGGCAGGATCAGGCTGACGCTCATCAGTGGCTCGCCCAACTCGGCCAGCAAGGCCAGGGTGATGGCAT < 2:52752/150‑1 CCCGCCATCGATCACCAGGTCAACATGGTGCTCCAGCCGTTCACGGATCTCGTAAGGGTCGGTCATCGGCTCGCTGTCGCCCGGCAGGATCAGGCTGACGCTCATCAGTGGCTCGCCCAACTCGGCCAGCAAGGCCAGGGTGATGGCATG < 2:2041958/150‑1 CCGCCATCGATCACCAGGTCAACATGGTGCTCCAGCCGTTCACGGATCTCGTAAGGGTCGGTCATCGGCTCGCTGTCGCCCGGCAGGATCAGGCTGACGCTCATCAGTGGCTCGCCCAACTCGGCCAGCAAGGCCAGGGTGATGGCATGG > 1:1481826/1‑150 CCGCCATCGATCACCAGGTCAACATGGTGCTCCAGCCGTTCACGGATCTCGTAAGGGTCGGTCATCGGCTCGCTGTCGCCCGGCAGGATCAGGCTGACGCTCATCAGTGGCTCGCCCAACTCGGCCA > 1:1047969/1‑127 CCGCCATCGATCACCAGGTCAACATGGTGCTCCAGCCGTTCACGGATCTCGTAAGGGTCGGTCATCGGCTCGCTGTCGCCCGGCAGGATCAGGCTGACGCTCATCAGTGGCTCGCCCAACTCGGCCA < 2:1047969/127‑1 CCGCCATCGATCACCAGGTCAACATGGTGCTCCAGCCGTTCACGGATCTCGTAAGGGTCGGTCATCGGCTCGCTGTCGCCCGGCAGGATCAGGCAGACGCTCATCAGTGGCTCGCCCAACTCGGCCAGCAAGGCCAGGGTGATGGCATGG > 1:243014/1‑150 CCGACCCTTACGAGATCCGTGAACGGCTGGAGCACCATGTTGACCTGGTGATCGATGGCGGGTTCGGCGACCTCAAGGCGTCGACCATCATCGACCTGTCCGGCGACGAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5114496‑5114385‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaaccCGCCATCGATCACCAGGTCAACATGGTGCTCCAGCCGTTCACGGATCTCGTAAGGGTCGGTCATCGGCTCGCTGTCGCCCGGCAGGATCAGGCTGACGCTCATCAGTGGCTCGCCCAACTCGGCCAGCAAGGCCAGGGTGATGGCATGG > NC_002947/5114437‑5114585 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |