| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5136167 | 90 (0.960) | 9 (0.100) | 6/238 | NT | 9.6% | coding (451/1566 nt) | PP_4521 | aerotaxis receptor |
| ? | NC_002947 | = 5136208 | 84 (0.950) | coding (410/1566 nt) | PP_4521 | aerotaxis receptor | |||||
GTGCGACGAATGGCCTGGTTCTGCCGGTGCTCGACCCAGTACCAAGCCAGCAGCAGACTTGCCATCAGCACCGCGAGCGCCGCATAGGGGGGCAGCCAAAGGTAACCCGCCGCCGACAGCAGGCCGGCGCCGATCAGTGGCCAGCCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5136016‑5136167‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggccGCAGCCCGGTGCCCTGGGCTGCTCGCCTGGGGCACGGCCTGGGCCATGGCTGGCCACTGATCGGCGCCGGCCTGCTGTCGGCGGCGGGTTACCTTTGGCTGCCCCCCTATGCGGCGCTCGCGGTGCTGATGGCAAGTCTGCTGCTGGCT < NC_002947/5136208‑5136060 ggcCGACGACTTGCCTTGTTCTGCCGGTGCTCGACCCAGTACCAAGCCAGCAGCAGACTTGCCATCAGCACCGCGAGCGCCGCATAGGGGGGCAGCCAAAGGTAACCCGCCGCCGACAGCAGGCCGGCGCCGATCAGTGGCCAGCCATGG > 2:821064/4‑150GTGCGACGAATGGCCTGGTTCTGCCGGTGCTCGACCCAGTACCAAGCCAGCAGCAGACTTGCTATCAGCACCGCGAGCGCCGCATAGGGGGGCAGCCAAAGGTAACCCGCCGCCGACAGCAGGCCGGCGCCGATCAGTGGCCAGCAATGG < 2:858766/150‑1GTGCGACGAATGGCCTGGTTCTGCCGGTGCTCGACCCAGTACCAAGCCAGCAGCAGACTTGCCATCAGCACCGCGAGCGCCGCATAGGGGGGCAGCCAAAGGTAACCCGCCGCCGACAGCAGGCCGGCGCCGATCAGTGGCCAGCCATGG < 2:2153366/150‑1GTGCGACGAATGGCCTGGTTCTGCCGGTGCTCGACCCAGTACCAAGCCAGCAGCAGACTTGCCATCAGCACCGCGAGCGCCGCATAGGGGGGCAGCCAAAGGTAACCCGCCGCCGACAGCAGGCCGGCGCCGATCAGTGGCCAGCCATGG > 1:679265/1‑150 TGCGACGAATGGCCTGGTTCTGCCGGTGCTCGACCCAGTACCAAGCCAGCAGCAGACTTGCCATCAGCACCGCGAGCGCCGCATAGGGGGGCAGCCAAAGGTAACCCGCCGCCGACAGCAGGCCGGCGCCGATCAGTGGCCAGCCATGGC < 1:1689330/150‑1 GCCTGGTTCTGCCGGTGCTCGACCCAGTACCAAGCCAGCAGCAGACTTGCCATCAGCACCGCGAGCGCCGCATAGGGGGGCAGCCAAAGGTAACCCGCCGCCGACAGCAGGCCGGCGCCGATCAGTGGCCAGCCATGGCCGCAGCCCGGT > 2:231887/1‑150 GCCTGGTTCTGCCGGTGCTCGACCCAGTACCAAGCCAGCAGCAGACTTGCCATCAGCACCGCGAGCGCCGCATAGGGGGGCAGCCAAAGGTAACCCGCCGCCGACAGCAGGCCGGCGCCGATCAGTGGCCAGCCATG > 2:885061/1‑137 GCCTGGTTCTGCCGGTGCTCGACCCAGTACCAAGCCAGCAGCAGACTTGCCATCAGCACCGCGAGCGCCGCATAGGGGGGCAGCCAAAGGTAACCCGCCGCCGACAGCAGGCCGGCGCCGATCAGTGGCCAGCCATG < 1:885061/137‑1 GACCCAGTACCAAGCCAGCAGCAGACTTGCCATCAGCACCGCGAGCGCCGCATAGGGGGGCAGCCAAAGGTAACCCGCCGCCGACAGCAGGCCGGCGCCGATCAGTGGCCAGCCATGGCCGCAGCCCGGTGCCCTGGGCTGCTCGCCTGG > 1:2021925/1‑150 GACCCAGTACCAAGCCAGCAGCAGACTTGCCATCAGCACCGCGAGCGCCGCATAGGGGGGCAGCCAAAGGTAACCCGCCGCCGACAGCAGGCCGGCGCCGATCAGTGGCCAGCCATGGCCGCAGCCCGGTGCCCTGGGCTGCTCGCCTGG > 1:2021982/1‑150 CAGTACCAAGCCAGCAGCAGACTTGCCATCAGCACCGCGAGCGCCGCATAGGGGGGCAGCCAAAGGTAACCCGCCGCCGACAGCAGGCCGGCGCCGATCAGTGGCCAGCCATGGCC‑CAGGCC‑GTGCCCTGGGCTGCTCGCCTGGGGCACG < 1:1299541/150‑1 AGCCAGCAGCAGACTTGCCATCAGCACCGCGAGCGCCGCATAGGGGGGCAGCCAAAGGTAACCCGCCGCCGACAGCAGGCCGGCGCCGATCAGTGGCCAGCCATGGCCGCAGCCCGGTGCCCTGGGCTGCTCGCCTGGGGCACGGCCTGG < 2:2021925/150‑1 AGCCAGCAGCAGACTTGCCATCAGCACCGCGAGCGCCGCATAGGGGGGCAGCCAAAGGTAACCCGCCGCCGACAGCAGGCCGGCGCCGATCAGTGGCCAGCCATGGCCGCAGCCCGGTGCCCTGGGCTGCTCGCCTGGGGCACGGCCTGG < 2:2021982/150‑1 AGCCAGCAGCAGACTTGCCATCAGCACCGCGAGCGCCGCATAGGGGGGCAGCCAAAGGTAACCCGCCGCCGACAGCAGGCCGGCGCCGATCAGTGGCCAGCCATGGCCGCAGCCCGGTGCCCTGGGCTGCTCGCCTGGGGCACGGCCTGG < 1:231887/150‑1 CCGCCGCCGACAGCAGGCCGGCGCCGATCAGTGGCCAGCCATGGCCGCAGCCCGGTGCCCTGGGCTGCTCGCCTGGGGCACGGCCTGGGCCATGG > 2:1087967/1‑95 CCGCCGCCGACAGCAGGCCGGCGCCGATCAGTGGCCAGCCATGGCCGCAGCCCGGTGCCCTGGGCTGCTCGCCTGGGGCACGGCCTGGGCCATGG < 1:1087967/95‑1 GGCCGCAGCCCGGTGCCCTGGGCTGCTCGCCTGGGGCACGGCCTGGGCCATGGCTGGCCACTGATCGGCGCCGGCCTGCTGTCGGCGGCGGGTTACCTTTGGCTGCCCCCCTATGCGGCGCTCGCGGTGCTGATGGCAAGTCTGCTGCTG < 2:1886686/150‑1 GGCCGCAGCCCGGTGCCCTGGGCTGCTCGCCTGGGGCACGGCCTGGGCCATGGCTGGCCACTGATCGGCGCCGGCCTGCTGTCGGCGGCGGGTTACCTTTGGCTGCCCCCCTATGCGGCGAGCTCGGTGCTGATGGCAAGTCTGCTGCTG < 1:1638287/150‑1 GCCGCAGCCCGGTGCCCTGGGCTGCTCGCCTGGGGCACGGCCTGGGCCATGGCTGGCCACTGATCGGCGCCGGCCTGCTGTCGGCGGCGGGTTACCTTTGGCTGCCCCCCTATGCGGCGCTCGCGGTGCTGATGGCAAGTCTGCTGCTGG < 2:2101801/150‑1 CGCAGCCCGGTGCCCTGGGCTGCTCGCCTGGGGCACGGCCTGGGCCATGGCTGGCCACTGATCGGCGCCGGCCTGCTGTCGGCGGCGGGTTACCTTTGGCTGCCCCCCTATGCGGCGCTCGCGGTGCTGATGGCAAGTCTGCTGCTGGCT < 2:128567/150‑1 CGCAGCCCGGTGCCCTGGGCTGCTCGCCTGGGGCACGGCCTGGGCCATGGCTGGCCACTGATCGGCGCCGGCCTGCTGTCGGCGGCGGGTTACCTTTGGCTGCCCCCCTATGCGGCGCTCGCGGTGCTGATGGCAAGTCTGCTGCTGGCT < 1:2151108/150‑1 CGCAGCCCGGTGCCCTGGGCTGCTCGCCTGGGGCACGGCCTGGGCCATCGGTTGCCACTGATCGGCGCCGGCCTGCTGTCGGCGGCGGGTTACCTTTGGCTGCCCCCCTATGCGGCGCTCGCGGTGCTGATGGCAAGTCTGCTGCTGGCT > 1:1635825/1‑150 GTGCGACGAATGGCCTGGTTCTGCCGGTGCTCGACCCAGTACCAAGCCAGCAGCAGACTTGCCATCAGCACCGCGAGCGCCGCATAGGGGGGCAGCCAAAGGTAACCCGCCGCCGACAGCAGGCCGGCGCCGATCAGTGGCCAGCCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5136016‑5136167‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggccGCAGCCCGGTGCCCTGGGCTGCTCGCCTGGGGCACGGCCTGGGCCATGGCTGGCCACTGATCGGCGCCGGCCTGCTGTCGGCGGCGGGTTACCTTTGGCTGCCCCCCTATGCGGCGCTCGCGGTGCTGATGGCAAGTCTGCTGCTGGCT < NC_002947/5136208‑5136060 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |