| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5196440 | 101 (1.080) | 13 (0.150) | 9/230 | NT | 11.9% | coding (123/690 nt) | ybgJ | allophanate hydrolase subunit 1 |
| ? | NC_002947 | = 5196465 | 100 (1.160) | coding (98/690 nt) | ybgJ | allophanate hydrolase subunit 1 | |||||
TACCACACCGGGATCTCGTGTCGGCGGCCGCCACTGCCTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5196282‑5196440‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgctcgccgCCAGCCGGCGCTTGAGCGCGGCGTTCGGCGAGCATTTGCTGGACCTGGTGCCGTCTTATACTACGCTGATGGTGCAGTCTGCCCTGGCGCCAGGCGAGGCCAGGGCGCGAATCGCTCAGGCGCTGGACGGCTTGCAGCCTGACACAGG < NC_002947/5196465‑5196318 TACCACACCGGGATCTCGTGTCGGCGGCCGCCACTGCCTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAA < 2:459164/150‑1TACCACACCGGGATCTCGTGTCGGCGGCCGCCACTGCCTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGCCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAA < 2:1049156/150‑1 ACCACACCGGGATCTCGTGTCGGCGGCCGCCACTGCCTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAAT > 1:4045/1‑150 ACACCGGGATCTCGTGTCGGCGGCCGCCACTGCCTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCT > 1:616948/1‑150 ACCGGGATCTCGTGTCGGCGGCCGCCAATGCCTGTGACAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCG > 1:298520/1‑150 CCGGGATCTCGTGTCGGCGGCCGCCACTGCCTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGC < 2:468180/150‑1 CGGGATCTCGTGTCGGCGGCCGCCACTGCCTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCAAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCC > 2:2402687/1‑150 GCCACTGCCTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGCCAGCCGGCGCTTGAGCGCG > 1:1482000/1‑150 CCACTGCCTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGCCAGCCGGCGCTTGAGCGCGG > 2:658102/1‑150 TGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCGGGGCCAGCAAATGCTCGCCGCCAGCCGGCGCTTGAGCGCGGCGTTCGGC < 1:658102/150‑1 TGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGCCAGCCGGCGCTTGAGCGCGGCGTTCGG > 1:1990165/1‑149 TGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGCCAGCCGGCGCTTGAGCGCGGCGTTCGG < 2:1990165/149‑1 TGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGCCAGCCGGCGCTTGAGCGCGGCGTTCGNCGA < 2:1502464/150‑1 TGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGCCAGCCGGCGCTTGAGCGCGGCGTTCGGCGA < 2:1482000/150‑1 CGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGCCAGCCGGCGCTTGAGCGCGGCGTTCGG < 2:298230/117‑1 CGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGCCAGCCGGCGCTTGAGCGCGGCGTTCGG > 1:298230/1‑117 TGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCT > 1:862876/1‑72 TGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCT < 2:862876/72‑1 CTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGCCAGCCGGCGCTTGAGCGCGGCGTTCGG > 2:2381049/1‑101 CTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGCCAGCCGGCGCTTGAGCGCGGCGTTCGG < 1:2381049/101‑1 ATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGGCGCTTGAGCGCGGCGTTCGG > 2:1282755/1‑73 ATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGGCGCTTGAGCGCGGCGTTCGG < 1:1282755/73‑1 GCTCGCCGCCAGCCGGCGCTTGAGCGCGGCGTTCGGCGAGCATTTGCTGGACCTGGTGCCGTCTTATACTACGCTGATGGTGCAGTCTGCCCTGGCGCCAGGCGAGGCCAGGGCGCGAATCGCTCAGGCGCTGGACGGCTTGCAGCCTGA < 2:1713313/150‑1 TCGCCGCCAGCCGGCGCTTGAGCGCGGCGTTCGGCGAGCATTTGCTGGACCTGGTGCCGTCTTATACTACGCTGATGGTGCATTCTGCCCTGGCGCCAGGCGAGGCCAGGGCGCGAATCGCTCAGGCGCTGGACGGCTTGCAGCCTGACA > 2:2413183/1‑150 TCGCCGCCAGCCGGCGCTTGAGCGCGGCGTTCGGCGAGCATTTGCTGGACCTGGTGCCGTCTTATACTACGCTGATGGTGCAGTCTGCCCTGGCGCCAGGCGATGCCAGGACGCGAATCGCGCAGGCGCGGGACGGCTTGCAGCCTGACA > 2:1084885/1‑150 TCGCCGCCAGCCGGCGCTTGAGCGCGGCGTTCGGCGAGCATTTGCTGGACCTGGTGCCGTCTTATACTACGCTGATGGTGCAGTCTGCCCTGGCGCCAGGCGAGGCCAGGGCGCGAATCGCTCAGGCGCTGGACGGCTTGCAGCCTGACA > 2:2002970/1‑150 TCGCCGCCAGCCGGCGCTTGAGCGCGGCGTTCGGCGAGCATTTGCTGGACCTGGTGCCGTCTTATACTACGCTGATGGTGCAGTCTGCCCTGGCGCCAGGCGAGGCCAGGGCGCGAATCGCTCAGGCGCTGGACGGCTTGCAGCCTGACA > 2:34922/1‑150 TCGCCGCCAGCCGGCGCTTGAGCGCGGCGTTCGGCGAGCATTTGCTGGACCTGGTGCCGTCTTATACTACGCTGATGGTGCAGTCTGCCCTGGCGCCAGGCGAGGCCAGGGCGCGAATCGCTCAGGCGCTGGACGGCTTGCAGCCTGACA > 2:714851/1‑150 CGCCAGCCGGCGCTTGAGCGCGGCGTTCGGCGAGCATTTGCTGGACCTGGTGCCGTCTTATACTACGCTGATGGTGCAGTCTGCCCTGGCGCCAGGCGAGGCCAGGGCGCGAATCGCTCAGGCGCTGGACGGCTTGCAGCCTGACACAGG < 2:1149662/150‑1 CGCCAGCCGGCGCTTGAGCGCGGCGTTCGGCGAGCATTTGCTGGACCTGGTGCCGTCTTATACTACGCTGATGGTGCAGTCTGCCCTGGCGCCAGGCGAGGCCAGGGCGCGAATCGCTCAGGCGCTGGACGGCTTGCAGCCTGACACAGG < 1:1959886/150‑1 TACCACACCGGGATCTCGTGTCGGCGGCCGCCACTGCCTGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5196282‑5196440‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgctcgccgCCAGCCGGCGCTTGAGCGCGGCGTTCGGCGAGCATTTGCTGGACCTGGTGCCGTCTTATACTACGCTGATGGTGCAGTCTGCCCTGGCGCCAGGCGAGGCCAGGGCGCGAATCGCTCAGGCGCTGGACGGCTTGCAGCCTGACACAGG < NC_002947/5196465‑5196318 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |