| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5356226 = | 66 (0.710) | 5 (0.060) | 5/234 | NT | 7.2% | intergenic (‑75/+42) | rbfA/infB | ribosome‑binding factor A/translation initiation factor IF‑2 |
| ? | NC_002947 | 5356257 = | 67 (0.770) | intergenic (‑106/+11) | rbfA/infB | ribosome‑binding factor A/translation initiation factor IF‑2 | |||||
TTCCGAAGTCCGTTCGGGCATGGAGTGCGGTATTGGCGTCAAGAGCTACAACGACGTCAAGGTCGGCGACAAGATCGAAGTCTTCGAGAAAGTCCAGGTGGCTCGTACCCTTTAAGGGCGAGCGAGCCGCAAGCGCCTGCTACAGGGCGGCTTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5356382‑5356226‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttgcggCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGACTTCGGAAGCATCGTCCTTGAAGCGACGCAG > NC_002947/5356257‑5356405 TTCCGAAGTCCGTTCGGGCATGGAGTGCGGTATTGGCGTCAAGAGCTACAACGACGTCAAGGTCGGCGACAAGATCGAAGTCTTCGAGAAAGTCCAGGTGGCTCGTACCCTTTAAGGGCGAGCGAGCCGCAAGCGCCTGCTACAGGGCGG > 1:1055262/1‑150 TCCGAAGTCCGTTCGGGCATGGAGTGCGGTATTGGCGTCAAGAGCTACAACGACGTCAAGGTCGGCGACAAGATCGAAGTCTTCGAGAAAGTCCAGGTGGCTCGTACCCTTTAAGGGCGAGCGAGCCGCAAGCGCCTGCTACAGGGCGGC < 1:2159742/150‑1 TCCGAAGTCCGTTCGGGCATGGAGTGCGGTATTGGCGTCAAGAGCTACAACGACGTCAAGGTCGGCGACAAGATCGAAGTCTTCGAGAAAGTCCAGGTGGCTCGTACCCTTTAAGGGCGAGCGAGCCGCAAGCGCCTGCTACAGGGCGGC > 2:60165/1‑150 CGAAGTCCGTTCGGGCATGGAGTGCGGTATTGGCGTCAAGAGCTACAACGACGTCAAGGTCGGCGACAAGATCGAAGTCTTCGAGAAAGTCCAGGTGGCTCGTACCCTTTAAGGGCGAGCGAGCCGCAAGCGCCTGCTACAGGGCGGCTT > 1:1189272/1‑150 GTCCGTTCGGGCATGGAGTGCGGTATTGGCGTCAAGAGCTACAACGACGTCAAGGTCGGCGACAAGATCGAAGTCTTCGAGAAAGTCCAGGTGGCTCGTACCCTTTAAGGGCGAGCGAGCCGCAAGCGCCTGCTACAGGGCGGCTTGCGG < 1:1217503/150‑1 GCCGCAAGCGCCTGCTACAGGGCGGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGA > 1:2347484/1‑150 CCGCAAGCGCCTGCTACAGGGCGGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTC < 1:556209/115‑1 CCGCAAGCGCCTGCTACAGGGCGGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTC > 2:556209/1‑115 GCGCCTGCTACAGGGCGGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCT < 1:551270/65‑1 GCGCCTGCTACAGGGCGGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCT > 2:551270/1‑65 TTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAAC < 1:2374827/121‑1 TTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAAC > 2:2374827/1‑121 TGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGACTTCGGAAGCATCGTCCTTGAAGCGAC < 1:478051/150‑1 GCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGACTTCGGAAGCATCGTCCTTGAAGCGACGCAG > 2:2277527/1‑150 GCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGACTTCGGAAGCATCGTCCTTGAAGCGACGCAG > 2:410165/1‑150 TTCCGAAGTCCGTTCGGGCATGGAGTGCGGTATTGGCGTCAAGAGCTACAACGACGTCAAGGTCGGCGACAAGATCGAAGTCTTCGAGAAAGTCCAGGTGGCTCGTACCCTTTAAGGGCGAGCGAGCCGCAAGCGCCTGCTACAGGGCGGCTTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5356382‑5356226‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttgcggCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGACTTCGGAAGCATCGTCCTTGAAGCGACGCAG > NC_002947/5356257‑5356405 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |