| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5712267 = | 91 (0.980) | 8 (0.090) | 6/230 | NT | 8.4% | coding (280/624 nt) | PP_5012 | hypothetical protein |
| ? | NC_002947 | 5712309 = | 91 (1.060) | coding (322/624 nt) | PP_5012 | hypothetical protein | |||||
GCGAGTCCAGCGAGCGCGCAGGCGGATATGGCCGGCCAGCATTGCCGTGGCGACCGGGCCAAGCCAGCGTTGCAGCTCGTGCTCCCAGTCCAGCTCCAGGTCCTGCAGCACACCGAACAGGTCGAGCAGTACGGCG‑CTGTCGCCGTGCAGCTCGACCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5712425‑5712267‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgacctgTTCGGTGTGCTGCAGGACCTGGAGCTGGACTGGGAGCACGAGCTGCAACGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTC > NC_002947/5712309‑5712457 GCGAGTCCAGCGAGCGCGCAGGCGGATATGGCCGGCCAGCATTGCCGTGGCGACCGGGCCAAGCCAGCGTTGCAGCTCGTGCTCCCAGTCCAGCTCCAGGTCCTGCAGCACACCGAACAGGTCGAGCAGTACGGCG‑CTGTCGCCGTGCAG > 2:2321278/1‑150GCGAGTCCAGCGAGCGCGCAGGCGGATATGGCCGGCCAGCATTGCCGTGGCGACCGGGCCAAGCCAGCGTTGCAGCTCGTGCTCCCAGTCCAGCTCCAGGTCCTGCAGCACACCGAACAGGTCGAGCAGTACGGCG‑CTGTCGCCGTGCAG > 2:1062611/1‑150 CGAGTCCAGCGAGCGCGCAGGCGGATATGGCCGGCCAGCATTGCCGTGGCGACCGGGCCAAGCCAGCGTTGCAGCTCGTGCTCCCAGTCCAGCTCCAGGTCCTGCAGCACACCGAACAGGTCGAGCAGTACGGCG‑CTGTCGCCGTGCAGC < 2:2159789/150‑1 TCCAGCGAGCGCGCAGGCGGATATGGCCGGCCAGCATTGCCGTGGCGACCGGGCCAAGCCAGCGTTGCAGCTCGTGCTCCCAGTCCAGCTCCAGGTCCTGCAGCACACCGAACAGGTCGAGCAGTACGGCG‑CTGTCGCCGTGCAGCTCGA > 1:419047/1‑150 CAGCGAGCGCGCAGGCGGATATGGCCGGCCAGCATTGCCGTGGCGACCGGGCCAAGCCAGCGTTGCAGCTCGTGCTCCCAGTCCAGCTCCAGGTCCTGCAGCACACCGAACAGGTCGAGCAGTACGGCG‑CTGTCGCCGTGCAGCTCGACC > 2:992226/1‑150 CAGCGAGCGCGCAGGCGGATATGGCCGGCCAGCATTGCCGTGGCGACCGGGCCAAGCCAGCGTTGCAGCTCGTGCTCCCAGTCCAGCTCCAGGTCCTGCAGCACACCGAACAGGTCGAGCAGTACGGCG‑CTGTCGCCGTGCAGCTCGACC > 1:1047687/1‑150 CAGCGAGCGCGCAGGCGGATATGGCCGGCCAGCATTGCCGTGGCGACCGGGCCAAGCCAGCGTTGCAGCTCGTGCTCCCAGTCCAGCTCCAGGTCCTGCAGCACACCGAACAGGTCGAGCAGTACGGCG‑CTGTCGCCGTGCAGCTCGACC > 2:374119/1‑150 AGCGAGCGCGCAGGCGGATATGGCCGGCCAGCATTGCCGTGGCGACCGGGCCAAGCCAGCGTTGCAGCTCGTGCTCCCAGTCCAGCTCCAGGTCCTGCAGCACACCGAACAGGTCGAGCAGTACGGCG‑CTGTCGCCGTGCAGCTCGACCT > 1:489110/1‑150 AGCGAGCGCGCAGGCGGATATGGCCGGCCAGCATTGCCGTGGCGACCGGGCCAAGCCAGCGTTGCAGCTCGTGCTCCCAGTCCAGCTCCAGGTCCTGCAGCACACCGAACAGGTCGAGCAGTACGGCG‑CTGTCGCCGTGCAGCTCGACCT > 2:2078566/1‑150 CGGCCAGCATTGCCGTGGCGACCGGGCCAAGCCAGCGTTGCAGCTCGTGCTCCCAGTCCAGCTCCAGGTCCTGCAGCACACCGAACAGGTCGAGCTGCACGGCGACAG‑CGCCGTACTGCTCGACCTGTTCGGT > 1:1392638/1‑133 CGGCCAGCATTGCCGTGGCGACCGGGCCAAGCCAGCGTTGCAGCTCGTGCTCCCAGTCCAGCTCCAGGTCCTGCAGCACACCGAACAGGTCGAGCTGCACGGCGACAG‑CGCCGTACTGCTCGACCTGTTCGGT < 2:1392638/133‑1 GCCAGCGTTGCAGCTCGTGCTCCCAGTCCAGCTCCAGGTCCTGCAGCACACCGAACAGGTCGAGCAGTACGGCG‑CTGTCGCCGTGCAGCTCGAC > 1:170496/1‑94 GCCAGCGTTGCAGCTCGTGCTCCCAGTCCAGCTCCAGGTCCTGCAGCACACCGAACAGGTCGAGCAGTACGGCG‑CTGTCGCCGTGCAGCTCGAC < 2:170496/94‑1 GTCGAGCAGTACGGCG‑CTGTCGCCGTGCAGCTCGACCTGTTCGGTGTGCTGCAGGACCTGGAGCTGGACTGGGAGCACGAGCTGCAACGCTGGCTTGGCCCGGTAGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGG > 2:280802/1‑150 GTCGAGCAGTACGGCG‑CTGTCGCCGTGCAGCTCGACCTGTTCGGTGTGCTGCAGGACCTGGAG > 2:87416/1‑63 GTCGAGCAGTACGGCG‑CTGTCGCCGTGCAGCTCGACCTGTTCGGTGTGCTGCAGGACCTGGAG < 1:87416/63‑1 GAGCAGTACGGCG‑CTGTCGCCGTGCAGCTCGACCTGTTCGGTGTGCTGCAGGACCTGGAGCTGGACTGGGAGCACGAGCTGCAACGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACT > 2:1061080/1‑150 GAGCAGTACGGCG‑CTGTCGCCGTGCAGCTCGACCTGCGGGCTGTGCAGCAGGACCTGGAGCTGGACTGGGAGCACGAGCTGCAACGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGA < 1:2065432/148‑1 GAGCAGTACGGCG‑CTGTCGCCGTGCAGCTCGACCTGCGGGCTGTGCAGCAGGACCTGGAGCTGGACTGGGAGCACGAGCTGCAACGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGA > 2:2065432/1‑148 GCTCGACCTGTTCGGTGTGCTGCAGGACCTGGAGCTGGACTGGGAGCACGAGCTGCAACGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCA < 1:1061080/150‑1 CTCGACCTGTTCGGTGTGCTGCAGGACCTGGAGCTGGACTGGGAGCACGAGCTGCAACGCTGGCTTGGCCTGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAG > 2:661487/1‑150 CTCGACCTGTTCGGTGTGCTGCAGGACCTGGAGCTGGACTGGGAGCACGAGCTGCAACGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGG > 2:2092705/1‑91 CTCGACCTGTTCGGTGTGCTGCAGGACCTGGAGCTGGACTGGGAGCACGAGCTGCAACGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGG < 1:2092705/91‑1 TCGACCTGTTCGGTGTGCTGCAGGACCTGGAGCTGGACTGGGAGCACGAGCTGCAACGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCAC < 1:474482/138‑1 TCGACCTGTTCGGTGTGCTGCAGGACCTGGAGCTGGACTGGGAGCACGAGCTGCAACGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCAC > 2:474482/1‑138 ACCTGTTCGGTGTGCTGCAGGACCTGGAGCTGGACTGGGAGCACGAGCTGCAACGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTCGCACGTTTCAGCCAGAACC > 2:1819688/1‑150 CCTGTTCGGTGTGCTGCAGGACCTGGAGCTGGACTGGGAGCACGAGCTGCAACGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCg > 2:2192032/1‑149 CCTGTTCGGTGTGCTGCAGGACCTGGAGCTGGACTGGGAGCACGAGCTGCAACGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCT > 1:560398/1‑150 CTGTTCGGTGTGCTGCAGGACCTGGAGCTGGACTGGGAGCACGAGCTGCAACGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTG > 1:1126682/1‑150 CTGTTCGGTGTGCTGCAGGACCTGGAGCTGGACTGGGAGCACGAGCTGCAACGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTG > 1:2346056/1‑150 GTTCGGTGTGCTGCAGGACCTGGAGCTGGACTGGGAGCACGAGCTGCAACGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTC < 2:1052946/150‑1 GCGAGTCCAGCGAGCGCGCAGGCGGATATGGCCGGCCAGCATTGCCGTGGCGACCGGGCCAAGCCAGCGTTGCAGCTCGTGCTCCCAGTCCAGCTCCAGGTCCTGCAGCACACCGAACAGGTCGAGCAGTACGGCG‑CTGTCGCCGTGCAGCTCGACCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5712425‑5712267‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgacctgTTCGGTGTGCTGCAGGACCTGGAGCTGGACTGGGAGCACGAGCTGCAACGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTC > NC_002947/5712309‑5712457 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |