| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5721489 = | 82 (0.880) | 5 (0.060) | 5/208 | NT | 6.4% | intergenic (+14/+96) | PP_5021/glnQ | methyl‑accepting chemotaxis transducer/glutamine transport ATP‑binding protein GlnQ |
| ? | NC_002947 | 5721574 = | 78 (1.000) | intergenic (+99/+11) | PP_5021/glnQ | methyl‑accepting chemotaxis transducer/glutamine transport ATP‑binding protein GlnQ | |||||
ATTCGGCCCCGGCCGCATTCTTCGCTGCGCCGAAAGACCCGCGTGCGCAGGCATTCCTGCGCCAGGTGCTGTAACCGCGCGGGCTTCTTCGCGGGCAAGCCCGCTCCTGCATGTCCACCACTGCCTTGATGGGGGTGATGTACCTGTGTGAGCGGGCTTGCCCGCGAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5721658‑5721489‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcgggcttgcccgcgaagaAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCCGAATCTTCCAGCAGCTTGCCATGGTCGAAGAACAGCACGCGGTCAGCCACTTCGCGGGCAAAGCCCAT > NC_002947/5721574‑5721722 ATTCGGCCCCGGCCGCATTCTTCGCTGCGCCGAAAGACCCGCGTGCGCAGGCATTCCTGCGCCAGGTGCTGTAACCGCGCGGGCTTCTTCGCGGGCAAGCCCGCTCCTGCATGTCCACCACTGCCTTGATGGGGGTGATGTACCTGTGTG > 1:866210/1‑150 CGGCCCCGGCCGCATTCTTCGCTGCGCCGAAAGACCCGCGTGCGCAGGCATTCCTGCGCCAGGTGCTGTAACCGCGCGGGCTTCTTCGCGGGCAAGCCCGCTCCTGCATGTCCACCACTGCCTTGATGGGGGTGATGTACCTGTGTGAGC < 2:775448/150‑1 GGCCCCGGCCGCATTCTTCGCTGCGCCGAAAGACCCGCGTGCGCAGGCATTCCTGCGCCAGGTGCTGTAACCGCGCGGGCTTCTTCGCGGGCAAGCCCGCTCCTGCATGTCCACCACTGCCTTGATGGGGGTGATGTACCTGTGTGAGCG < 2:946450/150‑1 GCCCCGGCCGCATTCTTCGCTGCGCCGAAAGACCCGCGTGCGCAGGCATTCCTGCGCCAGGTGCTGTAACCGCGCGGGCTTCTTCGCGGGCAAGCCCGCTCCTGCATGTCCACCACTGCCTTGATGGGGGTGATGTACCTGTGTGAGCGG < 2:2139145/150‑1 GCCCCGGCCGCATTCTTCGCTGCGCCGAAAGACCCGCGTGCGCAGGCATTCCTGCGCCAGGTGCTGTAACCGCGCGGGCTTCTTCGCGGGCAAGCCCGCTCCTGCATGTCCACCACTGCCTTGATGGGGGTGATGTACCTGTGTGAGCGG > 2:454058/1‑150 GCCCCGGCCGCATTCTTCGCTGCGCCGAAAGACCCGCGTGCGCAGGCATTCCTGCGCCAGGTGCTGTAACCGCGCGGGCTTCTTCGCGGGCAAGCCCGCTCCTGCATGTCCACCACTGCCTTGATGGGGGTGATGTACCTGTGTGAGCGG < 2:670908/150‑1 CCCGGCCGCATTCTTCGCTGCGCCGAAAGACCCGCGTGCGCAGGCATTCCTGCGCCAGGTGCTGTAACCGCGCGGGCTTCTTCGCGGGCAAGCCCGCTCCTGCATGTCCACCACTGCCTTGATGGGGGTGATGTACCTGTGTGAGCGGGC < 1:1031464/150‑1 CCCGGCCGCATTCTTCGCTGCGCCGAAAGACCCGCGTGCGCAGGCATTCCTGCGCCAGGTGCTGTAACCGCGCGGGCTTCTTCGCGGGCAAGCCCGCTCCTGCATGTCCACCACTGCCTTGATGGGGGTGATGTACCTGTGTGAGCGGGC < 1:2265595/150‑1 CCGGCCGCATTCTTCGCTGCGCCGAAAGACCCGCGTGCGCAGGCATTCCTGCGCCAGGTGCTGTAACCGCGCGGGCTTCTTCGCGGGCAAGCCCGCTCCTGCATGTCCACCACTGCCTTGATGGGGGTGATGTACCTGTGTGAGCGGGCT > 2:2256826/1‑150 CCGGCCGCATTCTTCGCTGCGCCGAAAGACCCGCGTGCGCAGGCATTCCTGCGCCAGGTGCTGTAACCGCGCGGGCTTCTTCGCGGGCAAGCCCGCTCCGGCATGGCCACCACTGCCTTGAGGGGGGGGATGGACCTGTGTGAGCGGGat > 2:1705794/1‑148 TTCGCTGCGCCGAAAGACCCGCGTGCGCAGGCATTCCTGCGCCAGGTGCTGTAACCGCGCGGGCTTCTCCGCGGGCAAGCCCGCTCCTGCATGTCCACCACTGCCTTGATGGGGGTGATGTACCTGTGTGAGCGGGCTTGCCCGCGAAGA < 1:454058/150‑1 ATTCCTGCGCCAGGTGCTGTAACCGCGCGGGCTTCTTCGCGGGCAAGCCCGCTCCTGCATGTCCACCACTGCCTTGATGGGGGTGATGTACCTGTGTGAGCGGGCTTGCCAGCGAAGA > 1:1218545/1‑118 ATTCCTGCGCCAGGTGCTGTAACCGCGCGGGCTTCTTCGCGGGCAAGCCCGCTCCTGCATGTCCACCACTGCCTTGATGGGGGTGATGTACCTGTGTGAGCGGGCTTGCCAGCGAAGA < 2:1218545/118‑1 GCGGGCAAGCCCGCTCCTGCATGTCCACCACTGCCTTGATGGGGGTGATGTACCTGTGTGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATG > 2:808792/1‑150 AAGCCCGCTCCTGCATGTCCACCACTGCCTTGATGGGGGTGATGTACCTGTGTGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCG > 2:1653673/1‑150 CCCGCTCCTGCATGTCCACCACTGCCTTGATGGGGGTGATGTACCTGTGTGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGG > 2:1894707/1‑150 CTTGATGGGGGTGATGTACCTGTGTGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCCGAATCTTCCAGCAGCTTGCCATG < 1:808792/150‑1 GGGGGTGATGTACCTGTGTGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCCGAATCTTCCAGCAGCTTGCCATGGTCGAA < 1:1894707/150‑1 TGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCCGAATCTTCCAGCAGCTTGCCATGGTCGAAGAACAGCACGCGGTCAGC < 1:1653673/150‑1 GAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCCGAATCTTCCAGCAGCTTGCCATGGTCGAAGAACAGCACGCGGTCAGCC > 2:1046165/1‑150 GCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCCGAATCTTCCAGCAGCTTGCCATGGTCGAAGAACAGCACGCGGTCAGCCAC < 1:2393711/150‑1 GGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCCGAATC < 2:1334552/102‑1 GGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCCGAATC > 1:1334552/1‑102 GCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCCGAATCTTCCAGCAGCTTGCCATGGTCGAAGAACAGCACGCGGTCAGCCACTTCG > 2:2386960/1‑150 CTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCCGAATCTTCCAGCAGCTTGCCATGGTCGAAGAACAGCACGCGGTCAGCCACTTCGC > 2:985644/1‑150 CTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCCGAATCTTCCAGCAGCTTGCCATGGTCGAAGAACAGCACGCGGTCAGCCACTTCGC < 2:677664/150‑1 CTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAA < 2:1149478/79‑1 CTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAA > 1:1149478/1‑79 TTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCCGAATCTTCCAGCAGCTTGCCATGGTCGAAGAACAGCACGCGGTCAGCCACTTCGCG < 1:1046165/150‑1 TTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCCGAATCTTCCAGCAGCTTGCCATGGTCGAAGAACAGCACGCGGTCAGCCACTTCGCG > 1:382459/1‑150 tgcaCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCCGAATCTTCCAGCAGCTTGCCATGGTCGAAGAACAGCACGCGGTCAGCCCCTTCGCGG < 2:1275413/146‑1 TGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCCGAATCTTCCAGCAGCTTGCCATGGTCGAAGAACAGCACGCGGTCAGCCACTTCGCGG < 2:1617670/150‑1 CCGCGAAGAAGCCCGCGCGGTTACAGCACGTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCCGAATCTTCCAGCAGCTTGCCATGGTCGAAGAACAGCACGCGGTCAGCCACTTCGCGGGCA > 1:2412412/1‑150 CCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGC > 2:3759/1‑89 CCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGC < 1:3759/89‑1 CGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCCGAATCTTCCAGCAGCTTGCCATGGTCGAAGAACAGCACGCGGTCAGCCACTTCGCGGGCAA > 2:2252610/1‑150 GCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCACAGCGAAGAATGCGGCCGGGGCCGAATCTTCCAGCAGCTTGCCATGGTCGAAGAACAGCACGCGGTCAGCCACTTCGCGGGCAAA > 2:1664286/1‑150 CGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCCGAATCTTCCA > 2:1556167/1‑97 CGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCCGAATCTTCCA < 1:1556167/97‑1 GAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCCGAATCTTCCAGCAGCTTGCCATGGTCGAAGAACAGCACGCGGTCAGCCACTTCGCGGGCAAAGCCCA < 1:2237431/150‑1 AAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCCGAATCTTCCAGCAGCTTGCCATGGTCGAAGAACAGCACGCGGTCAGCCACTTCGCGGGCAAAGCCCAT < 2:1877671/150‑1 ATTCGGCCCCGGCCGCATTCTTCGCTGCGCCGAAAGACCCGCGTGCGCAGGCATTCCTGCGCCAGGTGCTGTAACCGCGCGGGCTTCTTCGCGGGCAAGCCCGCTCCTGCATGTCCACCACTGCCTTGATGGGGGTGATGTACCTGTGTGAGCGGGCTTGCCCGCGAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5721658‑5721489‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcgggcttgcccgcgaagaAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCCGAATCTTCCAGCAGCTTGCCATGGTCGAAGAACAGCACGCGGTCAGCCACTTCGCGGGCAAAGCCCAT > NC_002947/5721574‑5721722 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |