New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5926884 | 103 (1.100) | 8 (0.090) | 8/234 | NT | 7.7% | coding (1067/1623 nt) | PP_5195 | iron ABC transporter permease |
? | NC_002947 | = 5926906 | 95 (1.090) | coding (1045/1623 nt) | PP_5195 | iron ABC transporter permease |
TACCTAGCAGCAGCGGCTTGCCGGCGCCGCCCAGCCAACTGGACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5926732‑5926884 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccggcgcCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTGGCCTGGCCAATCTGGGGTATGCCCTGCCCGGTTCGGTGTTGGCGGTATCGATCATGCTGGCCTTCAGTTACCTCGACAACCACCTGGTCATCCCGTTGTCCAGTTGGCT < NC_002947/5926906‑5926764 TACCTAGCAGCAGCGGCTTGCCGGCGCCGCCCAGCCAACTGGACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGG > 2:1674609/1‑150 AGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTGGC < 1:1150278/133‑1 AGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTGGC > 2:1150278/1‑133 GTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGG < 2:2182467/125‑1 GTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGG > 1:2182467/1‑125 CATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGC < 2:1110615/68‑1 CATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGC > 1:1110615/1‑68 ACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGG > 1:2289791/1‑80 ACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGG < 2:2289791/80‑1 GCCAACCCCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTGGCCTGGTCAATCTGGGGTATGCCCTGCCCGGTTCGGT > 2:1153575/1‑85 GCCAACCCCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTGGCCTGGTCAATCTGGGGTATGCCCTGCCCGGTTCGGT < 1:1153575/85‑1 ttcaCCCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTGGCCTGGCCAATCTGGGGTATGCCCTGCCCGGTTCGGTGTTGGCGGTATCGATC < 1:92326/95‑1 ttcaCCCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTGGCCTGGCCAATCTGGGGTATGCCCTGCCCGGTTCGGTGTTGGCGGTATCGATC > 2:92326/5‑99 aCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTGGCCTGGCCAATCTGGGGTATGCCCTGCCCGGTTCGGTGTTGGCGGTATCGATCATGCTGGCCTTCAGTTACCTCGACAACCACCTGGTCATCCCGTTGTCCAGTTGGCT > 1:685389/2‑150 CCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTGGCCTGGCCAATCTGGGGTATGCCCTGCCCGGTTCGGTGTTGGCGGTATCGATCATGCTGGCCTTCAGTTACCTCGACAACCACCTGGTCATCCCGTTGTCCAGTTGGCT > 2:1721686/1‑150 CCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTGGCCTGGCCAATCTGGGGTATGCCCTGCCCGGTTCGGTGTTGGCGGTATCGATCATGCTGGCCT > 1:274997/1‑104 CCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTGGCCTGGCCAATCTGGGGTATGCCCTGCCCGGTTCGGTGTTGGCGGTATCGATCATGCTGGCCT < 2:274997/104‑1 CCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTGGCCTGGCCAATCTGGGGTATGCCCTGCCCGGTTCGGTGTTGGCGGTATCAATCATGCTGGCCTTCAGTTACCTCGACAACC > 1:417171/1‑122 CCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTGGCCTGGCCAATCTGGGGTATGCCCTGCCCGGTTCGGTGTTGGCGGTATCAATCATGCTGGCCTTCAGTTACCTCGACAACC < 2:417171/122‑1 CCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTGGCCTGGCCAATCTGGGGTATGCCCTGCCCGGTTCGGTGTTG < 1:2027944/82‑1 CCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTGGCCTGGCCAATCTGGGGTATGCCCTGCCCGGTTCGGTGTTG > 2:2027944/1‑82 TACCTAGCAGCAGCGGCTTGCCGGCGCCGCCCAGCCAACTGGACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5926732‑5926884 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccggcgcCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTGGCCTGGCCAATCTGGGGTATGCCCTGCCCGGTTCGGTGTTGGCGGTATCGATCATGCTGGCCTTCAGTTACCTCGACAACCACCTGGTCATCCCGTTGTCCAGTTGGCT < NC_002947/5926906‑5926764 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |