| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5934919 = | 97 (1.040) | 11 (0.130) | 8/232 | NT | 12.0% | intergenic (+18/‑117) | PP_mr61/fau | 6S ncRNA/5‑formyltetrahydrofolate cyclo‑ligase |
| ? | NC_002947 | 5934942 = | 72 (0.830) | intergenic (+41/‑94) | PP_mr61/fau | 6S ncRNA/5‑formyltetrahydrofolate cyclo‑ligase | |||||
GACGTAGCTGGGGGCGGGTGAGCGGCACGTTTTCGGTCATGGCACGGGCGATCCCAGATGTGCTGGCTTTAGTACGAACAGTGCCTGCGCGGTGGATCGTCGTACAAAGCTTGAATAAAGTCGGCCAAAACGAATTGCCCGCCTTGGGGGCGGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5935075‑5934919‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgggcaaTTCGTTTTGGCCGACTTTATTCAAGCTTTGTACGACGATCCACCGCGCAGGCACTGTTCGTACTAAAGCCAGCACATCTGGGATCGCCCGTGCCATGACCGAAAACGTGCCGCTCACCCGCCCC > NC_002947/5934942‑5935065 GACGTAGCTGGGGGCGGGTGAGCGGCACGTTTTCGGTCATGGCACGGGCGATCCCAGATGTGCTGGCTTTAGTACGAACAGTGCCTGCGCGGTGGATCGTCGTACAAAGCTTGAATAAAGTCGGCCAAAACGAATTGCCCGCCTTGGGGG > 2:843311/1‑150 tctGCTGGGGGCGGGTGAGCGGAACGATTTCATTCATGGCACGGGCGATCCCAGATGTGCTGGCTTTAGTACGAACAGTGCCTGCGCGGTGGATCGTCGTACAAAGCTTGAATAAAGTCGGCCAAAACGAATTGCCCGCCTTGGGGNCGG < 2:1495915/147‑1 CTGGGGGCGGGTGAGCGGCACGTTTTCGGTCATGGCACGGGCGATCCCAGATGTGCTGGCTTTAGTACGAACAGTGCCTGCGCGGTGGATCGTCGTACAAAGCTTGAATAAAGTCGGCCAAAACGAATTGCCCGCCTTGGGGGCGGGaga > 1:1495915/1‑147 GGTCATGGCACGGGCGATCCCAGATGTGCTGGCTTTAGTACGAACAGTGCCTGCGCGGTGGATCGTCGTACAAAGCTTGAATAAAGTCGGCCAAAACGAATTGCCCGCCTTGGGGGCGG < 1:628889/119‑1 GGTCATGGCACGGGCGATCCCAGATGTGCTGGCTTTAGTACGAACAGGGCCTGCGCGGTGGATCGTCGTACAAAGCTTGAATAAAGTCGGCCAAAACGAATTGCCCGCCTTGGGGGCGG > 2:628889/1‑119 GCTTTAGTACGAACAGTGCCTGCGCGGTGGATCGTCGTACAAAGCTTGAATAAAGTCGGCCAAAACGAATTGCCCGCCCCCAAGGCGGGCAATTCGTTTT < 2:1761847/100‑1 GCTTTAGTACGAACAGTGCCTGCGCGGTGGATCGTCGTACAAAGCTTGAATAAAGTCGGCCAAAACGAATTGCCCGCCCCCAAGGCGGGCAATTCGTTTT > 1:1761847/1‑100 TTTAGTACGAACAGTGCCTGCGCGGTGGATCGTCGTACAAAGCTTGAATAAAGTCGGCCAAAACGAATTGCCCGCCCCCAAGGCGGGCAATTCGTTTTGG > 1:38321/1‑100 TTTAGTACGAACAGTGCCTGCGCGGTGGATCGTCGTACAAAGCTTGAATAAAGTCGGCCAAAACGAATTGCCCGCCCCCAAGGCGGGCAATTCGTTTTGG < 2:38321/100‑1 TACGAACAGTGCCTGCGCGGTGGATCGTCGTACAAAGCTTGAATAAAGTCGGCCAAAACGAATTGCCCGCCTTGGGGGCGG < 1:717577/81‑1 TACGAACAGTGCCTGCGCGGTGGATCGTCGTACAAAGCTTGAATAAAGTCGGCCAAAACGAATTGCCCGCCTTGGGGGCGG > 2:717577/1‑81 TACGAACAGTGCCTGCGCGGTGGATCGTCGTACAAAGCTTGAATAAAGTCGGCCAAAACGAATTGCCCGCCTTGGGGGCG < 2:180932/80‑1 TACGAACAGTGCCTGCGCGGTGGATCGTCGTACAAAGCTTGAATAAAGTCGGCCAAAACGAATTGCCCGCCTTGGGGGCG > 1:180932/1‑80 GAATTGCCCGCCTTGGGGGCGGGCAATTCGTTTTGGCCGACTTTATTCAAGCTTTGTACGACGATCCACCGCGCAGGCACTGTTCGTACTAAAGCCAGCACATCTGGGATCGCCCGTGCCATGACCGAAAACGTGCCGCTCACCCGCCCC > 1:119412/1‑150 TTGCCCGCCTTGGGGGCGGGCAATTCGTTTTGGCCGACTTTATTCAAGCTTTGTACGACGATCCACCGCGCAGGCACTGTTCGTACTAAAGCCAGCACATCTGGGATCGCCCGTGCCATGACCGAAAAC > 1:634376/1‑129 TTGCCCGCCTTGGGGGCGGGCAATTCGTTTTGGCCGACTTTATTCAAGCTTTGTACGACGATCCACCGCGCAGGCACTGTTCGTACTAAAGCCAGCACATCTGGGATCGCCCGTGCCATGACCGAAAAC < 2:634376/129‑1 TTGCCCGCCTTGGGGGCGGGCAATTCGTTTTGGCCGACTTTATTCAAGCTTTGTACGACGATCCACCGCGCAGGCACTGTTCGTACTAAAGCCAGCACATCTGG < 1:809212/104‑1 TTGCCCGCCTTGGGGGCGGGCAATTCGTTTTGGCCGACTTTATTCAAGCTTTGTACGACGATCCACCGCGCAGGCACTGTTCGTACTAAAGCCAGCACATCTGG > 2:809212/1‑104 TTGCCCGCCTTGGGGGCGGGCAATTCGTTTTGGCCGACTTTATTCAAGCTTTGTACGACGATCCACCGCGCAGGCACTGTTCGTACTAAA > 2:2370240/1‑90 TTGCCCGCCTTGGGGGCGGGCAATTCGTTTTGGCCGACTTTATTCAAGCTTTGTACGACGATCCACCGCGCAGGCACTGTTCGTACTAAA < 1:2370240/90‑1 GACGTAGCTGGGGGCGGGTGAGCGGCACGTTTTCGGTCATGGCACGGGCGATCCCAGATGTGCTGGCTTTAGTACGAACAGTGCCTGCGCGGTGGATCGTCGTACAAAGCTTGAATAAAGTCGGCCAAAACGAATTGCCCGCCTTGGGGGCGGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5935075‑5934919‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgggcaaTTCGTTTTGGCCGACTTTATTCAAGCTTTGTACGACGATCCACCGCGCAGGCACTGTTCGTACTAAAGCCAGCACATCTGGGATCGCCCGTGCCATGACCGAAAACGTGCCGCTCACCCGCCCC > NC_002947/5934942‑5935065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |