| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5947143 = | 90 (0.960) | 9 (0.110) | 7/228 | NT | 8.5% | intergenic (‑79/+127) | ubiD/rho | 3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase/transcription termination factor Rho |
| ? | NC_002947 | 5947248 = | 111 (1.300) | intergenic (‑184/+22) | ubiD/rho | 3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase/transcription termination factor Rho | |||||
GTTCTTCCTGTCGATGAAGCGCAAGTAAGCGAGCGTTTCAGGCTGGATTGATTGGGGCCGCCTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTGCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAGGGATGCAAAGCGGCCCCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5947297‑5947143‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccccaatCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATCGTTGGTCTTGGTCTGCTTGAGCTTGTCGACCAGGAACTCGATGGCAGCGATTTCGTCCATCGGGTGCAGCAGCTTGCGCAGAATCCACATA > NC_002947/5947248‑5947393 GTTCTTCCTGTCGATGAAGCGCAAGTAAGCGAGCGTTTCAGGCTGGATTGATTGGGGCCGCCTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTGCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAGGGATGCAAAGCGGCC > 1:1668302/1‑150 TTCTTCCTGTCGATGAGGCGCAAGTAAGCGAGCGTTTCAGGCTGGATTGATTGGGGCCGCCTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTGCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAGGGATGCAAGGCGGCCC > 2:1224293/1‑150 TTCTTCCTGTCGATGAAGCGCAAGTAAGCGAGCGTTTCAGGCTGGATTGATTGGGGCCGCCTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTGCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAAGGATGCAATGCGGCCC > 2:1224041/1‑150 TTCTTCCGGTCGATGAAGCGCAAGTAAGCGAGCGTTTCAGGCTGGATTGATTGGGGCCGCCTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTGCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAGGGATGCAAAGCGGCCC < 2:280176/150‑1 TCCTGTCGATGAAGCGCAAGTAAGCGAGCGTTTCAGGCTGGATTGATTGGGGCCGCCTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTGCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAGGGATGCAAAGCGGCCCCAAT < 2:1874858/150‑1 TCCTGTCGATGAAGCGCAAGTAAGCGAGCGTTTCAGGCTGGATTGATTGGGGCCGCCTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTGCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAGGGATGCAAAGCGGCCCCAAT < 1:1765866/150‑1 TCCTGTCGATGAAGCGCAAGTAAGCGAGCGTTTCAGGCTGGATTGATTGGGGCCGCCTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTGCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAGGGATGCAAAGCGGCCCCAAT < 1:2031572/150‑1 AGTAAGCGAGCGTTTCAGGCTGGATTGATTGGGGCCGCCTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTGCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAGGGATGCAAAGCGGCCCCAA > 2:49672/1‑131 AGTAAGCGAGCGTTTCAGGCTGGATTGATTGGGGCCGCCTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTGCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAGGGATGCAAAGCGGCCCCAA < 1:49672/131‑1 GGGCCGCCTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTGCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAGGGATGCAAAGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGC > 1:400562/1‑133 GGGCCGCCTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTGCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAGGGATGCAAAGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGC < 2:400562/133‑1 GCCGCCTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTGCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAGGGATGCAAAGCG > 1:533502/1‑91 GCCGCCTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTGCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAGGGATGCAAAGCG < 2:533502/91‑1 GGCCCTTCGCGGGCAAGCCCGCTCCTGCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAGGGATGCAAAGCGGCCCC > 1:499314/1‑86 GGCCCTTCGCGGGCAAGCCCGCTCCTGCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAGGGATGCAAAGCGGCCCC < 2:499314/86‑1 CTTCGCGGGCAAGCCCGCTCCTGCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATCGTTGGTCTTG > 1:2345900/1‑150 AGCCCGCTCCTGCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAGGGATGCAAAGCGGCCCCAAT > 1:1695167/1‑74 AGCCCGCTCCTGCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAGGGATGCAAAGCGGCCCCAAT < 2:1695167/74‑1 CCGCTCCTGCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATCGTTGGTCTTGGTCTGCTTGAGCTT > 2:2212229/1‑150 CCGCTCCTGCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAGGGATGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATCGTTGGTCTTGGTCTGCTTGAGCTT > 1:29082/1‑150 CCGCTCCTGCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAGGGATGCAAAGCGGCCCCAATCAATCCAGCCCGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATCGTTGGTCTTGGTCTGCTTGAGCTT > 1:935715/1‑150 GCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATCGTTGGTCTTGGTCTGCTTGAGCTTGTCGAC > 1:267630/1‑150 GGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAGGGATGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATCGTTGGTCTTGGTCTGCTTGAGCTTGTCGACCAGGAACTCGATGGCA < 2:29082/150‑1 GGAGCGGGCTT‑‑CCGCGAAGGGATGCAAAGCGGCCCCAATCAATCCAGCCCGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATCGTTGGTCTTGGTCTGCTTGAGCTTGTCGACCAGGAACTCGATGGCAGCGATTTCGT < 2:935715/150‑1 GCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATCGTTGGTCTTGGTCTGCTTGAGCTTGTCGACCAGGAACTCGATGGCAGCGATTTCGTCCATCGGGTGCAGCAGCTTGCGCAGAAT > 1:89532/1‑150 GCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATCGTTGGTCTTGGTCTGCTTGAGCTTGTCGACCAGGAACTCGATGGCAGCGATTTCGTCCATCGGGTGCAGCAGCTTGCGCAGAATCCA < 1:1028795/150‑1 CCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATCGTTGGTCTTGGTCTGCTTGAGCTTGTCGACCAGGAACTAGAGTGCAGCGATTTCGTCCATCGGGTGCAGCAGCTTGCGCAGAATCCAC > 1:1330273/1‑150 CCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATCGTTGGTCTTGGTCTGCTTGAGCTTGTCGACCAGGAACTCGATGGCAGCGATTTCGTCCATCGGGTGCAGCAGCT < 2:275183/135‑1 CCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATCGTTGGTCTTGGTCTGCTTGAGCTTGTCGACCAGGAACTCGATGGCAGCGATTTCGTCCATCGGGTGCAGCAGCT > 1:275183/1‑135 CCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATCGTTGGTCTTGGTCTGCTTGAGCTTGTCGACCAGGAACTCGATGGCAGCGATTTCGTCCATCGGGTGCAGCAGCTTGCGCAGAATCCACAT > 1:1005600/1‑150 CAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATCGTTGGTCTTGGTCTGCTTGAGCTTGTCGACCAGGAACTCGATGGCAGCGATTTCGTCCATCGGGTGAAGCAGCTTGCGCAGAATCCACATA < 1:1872736/150‑1 GTTCTTCCTGTCGATGAAGCGCAAGTAAGCGAGCGTTTCAGGCTGGATTGATTGGGGCCGCCTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTGCACAGGTCATTGCGGCCCTTGTAGGAGCGGGCTT‑‑CCGCGAAGGGATGCAAAGCGGCCCCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5947297‑5947143‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccccaatCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATCGTTGGTCTTGGTCTGCTTGAGCTTGTCGACCAGGAACTCGATGGCAGCGATTTCGTCCATCGGGTGCAGCAGCTTGCGCAGAATCCACATA > NC_002947/5947248‑5947393 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |