| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5957517 | 79 (0.850) | 6 (0.070) | 6/240 | NT | 7.1% | coding (865/2856 nt) | cyaA | adenylate cyclase |
| ? | NC_002947 | = 5957531 | 80 (0.890) | coding (879/2856 nt) | cyaA | adenylate cyclase | |||||
TTCATCCGCAGCCAGGAAGCCCTTGACCTCGGCAACCTGGCGCACATTCCGCCCGGCGAGTTCGTCGGCGCTGGCCTGTGGCAATTGTTCAAAGGCATCGACTCGCCCTACAAATCGCTGCTCAAACTGCTGCTAACCGAAGCCTACGCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5957364‑5957517‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgCAC‑CGCAGGGTGTTCGCTGGCGTAGGCTTCGGTTAGCAGCAGTTTGAGCAGCGATTTGTAGGGCGAGTCGATGCCTTTGAACAATTGCCACAGGCCAGCGCCGACGAACTCGCCGGGCGGAATGTGCGCCAGGTTGCCGAGGTCAAGGG < NC_002947/5957531‑5957383 TTCATCCGCAGCCAGGAAGCCCTTGACCTCGGCAACCTGGCGCACATTCCGCCCGGCGAGTTCGTCGGCGCTGGCCTGTGGCAATTGTTCAAAGGCATCGACTCGCCCTACAAATCGCTGCTCAAACTGCTGCTAACCGAAGCCTACGCC > 1:2086282/1‑150TTCATCCGCAGCCAGGAAGCCCTTGACCTCGGCAACCTGGCGCACATTCCGCCCGGCGAGTTCGTCGGCGCTGGCCTGTGGCAATTGTTCAAAGGCATCGACTCGCCCTACAAATCGCTGCTCAAACTGCTGCTAACCGAAGCCTACGCC > 2:388202/1‑150 TCATCTGCAGCCGGGAAGCTCTTGACCTCGGCAACCTGGCGAACATTCCGCCTGGCGAGTTCGTCGGCGCTGGCCTATGGCAATTGTTCAAAGGCATCGACTCGCCCTACAAATCGCTGCTCAAACTGCTGCTAACCGAAGCCTACGCCA < 2:134340/150‑1 TCATCCGCAGCCAGGAAGCCCTTGACCTCGGCAACCTGGCGCACATTCCGCCCGGCGAGTTCGTCGGCGCTGGCCTGTGGCAATTGTTCAAAGGCATCGACTCGCCCTACAAATCGCTGCTCAAACTGCTGCTAACCGAAGCCTACGCCA < 1:1803681/150‑1 ATCCGCAGCCAGGAAGCCCTTGACCTCGGCAACCTGGCGCACATTCCGCCCGGCGAGTTCGTCGGCGCTGGCCTGTGGCAATTGTTCAAAGGCATCGACTCGCCCTACAAATCGCTGCTCAAACTGCTGCTAACCGAAGCCTACGCCAGC < 2:255844/150‑1 TTGACCTCGGCAACCTGGCGCACATTCCGCCCGGCGAGTTCGTCGGCGCTGGCCTGTGGCAATTGTTCAAAGGCATCGACTCGCCCTACAAATCGCTGCTCAAACTGCTGCTAACCGAAGCCTACGCCAGCGCAC‑CGCAGGGTGTTCGCT < 1:1160591/150‑1 TTCGTCGGCGCTGGCCTGTGGCAATTGTTCAAAGGCATCGACTCGCCCTACAAATCGCTGCTCAAACTGCTGCTAACCGAAGCCTACGCCAGCGCAC‑CGCAGGGTGTTCGCTGGCGTAGGCTTCG < 1:2425068/125‑1 TTCGTCGGCGCTGGCCTGTGGCAATTGTTCAAAGGCATCGACTCGCCCTACAAATCGCTGCTCAAACTGCTGCTAACCGAAGCCTACGCCAGCGCAC‑CGCAGGGTGTTCGCTGGCGTAGGCTTCG > 2:2425068/1‑125 CCTGTGGCAATTGTTCAAAGGCATCGACTCGCCCTACAAATCGCTGCTCAAACTGCTGCTAACCGAAGCCTACGCCAGCGCAC‑CGCAGGGTGTTCGCTG < 1:2358356/99‑1 CCTGTGGCAATTGTTCAAAGGCATCGACTCGCCCTACAAATCGCTGCTCAAACTGCTGCTAACCGAAGCCTACGCCAGCGCAC‑CGCAGGGTGTTCGCTG > 2:2358356/1‑99 ACCGAAGCCTACGCCAGCGAACACCCTGCG‑GTGCGCTGGCGTAGGCTTCGGTTAGCAGCAGTTTGAGCAGCGATTTGTAGGGCGAGTCGATGCCTTTGAACAATTGCCACAGGCCAGCGCCGACGAACTCGCCGGGCGGAATGTGCGCCA > 1:388202/1‑150 CAGCGCAC‑CGCAGGGTGTTCGCTGGCGTAGGCTTCGGTTAGCAGCAGTTTGAGCAGCGATTTGTAGGGCGAGTCGATGCCTTTGAACAATTGCCACAGGCCAGCGCCGACGAACTCGCCGGGCGGAATGTGCGCCAGGTTGCCGAGGTCA > 2:310861/1‑150 AGCGCAC‑CGCGGGGTGTTCGCTGGCGTAGGCTTCGGTTAGCAGCAGTTTGAGCAGTGATTTGTAGGTCGAGTCGATGCCTTTGAACAATTGCCACAGGCCAGCGCCGACGAACTCGCCGGGCGGAATGTGCGCCAGGTTGCCGAGGTCAA < 2:719748/150‑1 GCAC‑CGCAGGGTGTTCGCTGGCGTAGGCTTCGGTTAGCAGCAGTTTGAGCAGCGATTTGTAGGGCGAGTCGATGCCTTTGAACAATTGCCACAGGCCAGCGCCGACGAACTCGCCGGGCGGAATGTGCGCCAGGTTGCCGATGTCAAGGG < 2:220025/150‑1 GCAC‑CGCAGGGTGTTCGCTGGCGTAGGCTTCGGTTAGCAGCAGTTTGAGCAGCGATTTGTAGGGCGAGTCGATGCCTTTGAACAATTGCCACAGGCCAGCGCCGACGAACTCGCCGGGCGGAATGTGCGCCAGGTTGCCGA > 1:1091299/1‑141 GCAC‑CGCAGGGTGTTCGCTGGCGTAGGCTTCGGTTAGCAGCAGTTTGAGCAGCGATTTGTAGGGCGAGTCGATGCCTTTGAACAATTGCCACAGGCCAGCGCCGACGAACTCGCCGGGCGGAATGTGCGCCAGGTTGCCGA < 2:1091299/141‑1 TTCATCCGCAGCCAGGAAGCCCTTGACCTCGGCAACCTGGCGCACATTCCGCCCGGCGAGTTCGTCGGCGCTGGCCTGTGGCAATTGTTCAAAGGCATCGACTCGCCCTACAAATCGCTGCTCAAACTGCTGCTAACCGAAGCCTACGCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5957364‑5957517‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgCAC‑CGCAGGGTGTTCGCTGGCGTAGGCTTCGGTTAGCAGCAGTTTGAGCAGCGATTTGTAGGGCGAGTCGATGCCTTTGAACAATTGCCACAGGCCAGCGCCGACGAACTCGCCGGGCGGAATGTGCGCCAGGTTGCCGAGGTCAAGGG < NC_002947/5957531‑5957383 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |