New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 6101142 = | 142 (1.520) | 6 (0.070) | 4/242 | NT | 4.1% | coding (238/2187 nt) | uvrD | DNA‑dependent ATPase I/helicase II |
? | NC_002947 | 6101164 = | 140 (1.550) | coding (260/2187 nt) | uvrD | DNA‑dependent ATPase I/helicase II | |||||
Rejected: Frequency below/above cutoff threshold. |
TGACCCGCTTGATCAGGCGCTGCTGGTCGTCGCTGTCGAGGATCTGGAAGTTCTGCACCAGCCGCGCTTCCTGCCAGTGGGCCCGCAACAGGCGATGGGCCAGGCCGTGGAAGGTGCCTACCCACATGCCTGCCGGGTTGATGCCCAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6101292‑6101142 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagGCATGTGGGTAGGCACCTTCCACGGCCTGGCCCATCGCCTGTTGCGGGCCCACTGGCAGGAAGCGCGGCTGGTGCAGAACTTCCAGATCCTCGACAGCGACGACCAGCAGCGCCTGATCAAGCGGGTCATGCGCGAGTTGGGCCTG > NC_002947/6101164‑6101309 TGACCCGCTTGATCAGGCGCTGCTGGTCGTCGCTGTCGAGGATCTGGAAGTTCTGCACCAGCCGCGCTTCCTGCCAGTGGGCCCGCAACAGGCGATGGGCCAGGCCGTGGAAGGTGCCTACCCACATGCCTGCCGGGTTGATGCCCAGCA < 1:1044753/150‑1 TGACCCGCTTGATCAGGCGCTGCTGGTCGTCGCTGTCGAGGATCTGGAAGTTCTGCACCAGCCGCGCTTCCTGCCAGTGGGCCCGCAACAGGCGATGGGCCAGGCCGTGGAAGGTGCCTACCCACATGCCTGCCGGGTTGATGCCCAGCA < 1:1641819/150‑1 CCACATGCCTGCCGGGTTGATGCCCAGCAGGCATGTGGGTAGGCACCTTCCACGGCCTGGCCCATCGCCTGTTGCGG > 1:2055443/1‑77 CCACATGCCTGCCGGGTTGATGCCCAGCAGGCATGTGGGTAGGCACCTTCCACGGCCTGGCCCATCGCCTGTTGCGG > 1:827531/1‑77 CCACATGCCTGCCGGGTTGATGCCCAGCAGGCATGTGGGTAGGCACCTTCCACGGCCTGGCCCATCGCCTGTTGCGG < 2:2055443/77‑1 CCACATGCCTGCCGGGTTGATGCCCAGCAGGCATGTGGGTAGGCACCTTCCACGGCCTGGCCCATCGCCTGTTGCGG < 2:827531/77‑1 ATGCCTGCCGGGTTGATGCCCAGCAGGCATGTGGGTAGGCACCTTCCACGGCCTGGCCCATCGCCTGTTGCGGGCCCACTGGCAGGAAGCGCGGCTGGTGCA < 1:425403/102‑1 ATGCCTGCCGGGTTGATGCCCAGCAGGCATGTGGGTAGGCACCTTCCACGGCCTGGCCCATCGCCTGTTGCGGGCCCACTGGCAGGAAGCGCGGCTGGTGCA > 2:425403/1‑102 GCAGGCATGTGGGTAGGCACCTTCCACGGCGTGGTCGATCGCCTGTTGCGGGCCCACTGGCAGGAAGCGCGGCTGGTGCAGAACTTCCAGATCCTCGACAGCGACGACCAGCAGCGCCTGATCAAGCGGGTCATGCGCGAGTTGGGCCTG < 2:189474/150‑1 TGACCCGCTTGATCAGGCGCTGCTGGTCGTCGCTGTCGAGGATCTGGAAGTTCTGCACCAGCCGCGCTTCCTGCCAGTGGGCCCGCAACAGGCGATGGGCCAGGCCGTGGAAGGTGCCTACCCACATGCCTGCCGGGTTGATGCCCAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6101292‑6101142 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagGCATGTGGGTAGGCACCTTCCACGGCCTGGCCCATCGCCTGTTGCGGGCCCACTGGCAGGAAGCGCGGCTGGTGCAGAACTTCCAGATCCTCGACAGCGACGACCAGCAGCGCCTGATCAAGCGGGTCATGCGCGAGTTGGGCCTG > NC_002947/6101164‑6101309 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |