| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6131500 = | 95 (1.020) | 8 (0.090) | 8/238 | NT | 8.4% | coding (78/1080 nt) | copB‑II | copper resistance protein B |
| ? | NC_002947 | 6131522 = | 85 (0.960) | coding (56/1080 nt) | copB‑II | copper resistance protein B | |||||
CCATGGCTCGATGGAAGGTATGGATCACAGCAAAATGATGGAATCGCATGGCAGCGATAAAGCTAAGGCAGGGAAAGATGACCAATAGCCTGGCACGACCATCGCTGCTGGCATTGACCGTTTCATTCAGCATGCTGGGTGCTGCTGCGCCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6131654‑6131500‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccagc‑ATGCTGAATGAAACGGTCAATGCCAGCAGCGATGGTCGTGCCAGGCTATTGGTCATCTTTCCCTGCCTTAGCTTTATCGCTGCCATGCGATTCCATCATTTTGCTGTGATCCATACCTTCCATCGAGCCATGGTCCATACCTTTCATG > NC_002947/6131522‑6131669 CCATGGCTCGATGGAAGGTATGGATCACAGCAAAATGATGGAATCGCATGGCAGCGATAAAGCTAAGGCAGGGAAAGATGACCAATAGCCTGGCACGACCATCGCTGCTGGCATTGACCGTTTCATTCAGCATGCTGGGTGCTGCTGCGC < 1:779089/150‑1 GCTCGATGGAAGGTATGGATCACAGCAAAATGATGGAATCGCATGGCAGCGATAAAGCTAAGGCAGGGAAAGATGACCAATAGCCTGGCACGACCATCGCTGCTGGCATTGACCGTTTCATTCAGCATGCTGGGCGCAGCAGCACCCAGC < 1:632590/150‑1 GCAGCGATAAAGCTAAGGCAGGGAAAGATGACCAATAGCCTGGCACGACCATCGCTGCTGGCATTGACCGTTTCATTCAGCATGCTGGGCGCAGCAGCACCCAGC‑ATGCTGAA > 2:353858/1‑113 GCAGCGATAAAGCTAAGGCAGGGAAAGATGACCAATAGCCTGGCACGACCATCGCTGCTGGCATTGACCGTTTCATTCAGCATGCTGGGCGCAGCAGCACCCAGC‑ATGCTGAA < 1:353858/113‑1 GGAAAGATGACCAATAGCCTGGCACGACCATCGCTGCTGGCATTGACCGTTTCATTCAGCATGCTGGGCGCAGCAGCACCCAGC‑ATGCTGAA < 2:979432/92‑1 GGAAAGATGACCAATAGCCTGGCACGACCATCGCTGCTGGCATTGACCGTTTCATTCAGCATGCTGGGCGCAGCAGCACCCAGC‑ATGCTGAA > 1:979432/1‑92 ACGACCATCGCTGCTGGCATTGACCGTTTCATTCAGCATGCTGGGTGCTGCTGCGCCCAG < 2:612058/60‑1 ACGACCATCGCTGCTGGCATTGACCGTTTCATTCAGCATGCTGGGTGCTGCTGCGCCCAG > 1:612058/1‑60 CCGTTTCATTCAGCATGCTGGGTGCTGCTGCGCCCAGCTTTGCTGAATGAAACGGTCAATGCCAGCAGCGAT < 1:962660/72‑1 CCGTTTCATTCAGCATGCTGGGTGCTGCTGCGCCCAGCTTTGCTGAATGAAACGGTCAATGCCAGCAGCGAT > 2:962660/1‑72 TGGGTGCTGCTGCGCCCAGC‑ATGCTGAATGAAACGGTCAATGCCAGCAGCGATGGTCGTGCCAGGCTATTGGTCATCTTTCCCTGCCTTAGCTTTATCGCTGCCATG < 2:2044529/107‑1 TGGGTGCTGCTGCGCCCAGC‑ATGCTGAATGAAACGGTCAATGCCAGCAGCGATGGTCGTGCCAGGCTATTGGTCATCTTTCCCTGCCTTAGCTTTATCGCTGCCATG > 1:2044529/1‑107 CCCAGC‑ATGCTGAATGAAACGGTCAATGCCAGCAGCGATGGTCGTGCCAGGCTATTGGTCATCTTTCCCTGCCTTAGCTTTATCGCTGCCATGCGATTCCATCATTTTGCTGTGATCCATACCTTCCATCGAGCCATGGTACATACCTTT > 1:1534056/1‑150 CCAGC‑ATGCTGAATGAAACGGTCAATGCCAGCAGCGATGGTCGTGCCAGGCTATTGGTCATCTTTCCCTGCCTTAGCTTTATCGCTGCCATGCGATTCCATCATTTTGCTGTGATCCATACCTTCCATCGAGCCATGGTCCATACCTTTC > 1:2025426/1‑150 CCAGC‑ATGCTGAATGAAACGGTCAATGCCAGCAGCGATGGTCGTGCCAGGCTATTGGTCATCTTTCCCTGCCTTAGCTTTATCGCTGCCATGCGA > 1:1346164/1‑95 CCAGC‑ATGCTGAATGAAACGGTCAATGCCAGCAGCGATGGTCGTGCCAGGCTATTGGTCATCTTTCCCTGCCTTAGCTTTATCGCTGCCATGCGA < 2:1346164/95‑1 CCAGC‑ATGCTGAATGAAACGGTCAATGCCAGCAGCGATGGTCGTGCC > 2:1865490/1‑47 CCAGC‑ATGCTGAATGAAACGGTCAATGCCAGCAGCGATGGTCGTGCC < 1:1865490/47‑1 GC‑ATGCTGAATGAAACGGTCAATGCCAGCAGCGATGGTCGTGCCAGGCTATTGGTCATCTTTCCCTGCCTTAGCTTTATCGCTGCCATGCGATTCCATCATTTTGCTGTGATCCATACCTTCCATCGAGCCATGGTCCATACCTTTCATG < 1:991439/150‑1 C‑ATGCTGAATGAAACGGTCAATGCCAGCAGCGATGGTCGTGCCAGGCTATTGGTCATCTTTCCCTGCCTTAGCTTTATCGCTGCCATGCGATTCCA > 1:247572/1‑96 C‑ATGCTGAATGAAACGGTCAATGCCAGCAGCGATGGTCGTGCCAGGCTATTGGTCATCTTTCCCTGCCTTAGCTTTATCGCTGCCATGCGATTCCA < 2:247572/96‑1 CCATGGCTCGATGGAAGGTATGGATCACAGCAAAATGATGGAATCGCATGGCAGCGATAAAGCTAAGGCAGGGAAAGATGACCAATAGCCTGGCACGACCATCGCTGCTGGCATTGACCGTTTCATTCAGCATGCTGGGTGCTGCTGCGCCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6131654‑6131500‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccagc‑ATGCTGAATGAAACGGTCAATGCCAGCAGCGATGGTCGTGCCAGGCTATTGGTCATCTTTCCCTGCCTTAGCTTTATCGCTGCCATGCGATTCCATCATTTTGCTGTGATCCATACCTTCCATCGAGCCATGGTCCATACCTTTCATG > NC_002947/6131522‑6131669 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |