New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6146976	157 (1.680)	3 (0.030)	3/238	NT	1.9%	coding (431/1023 nt)	PP_5392	WD40/YVTN repeat‑containing protein
	?	NC_002947	= 6147014	154 (1.730)					coding (393/1023 nt)	PP_5392	WD40/YVTN repeat‑containing protein
Rejected: Frequency below/above cutoff threshold.

CCTACGGGAATCTGCGCGGTTTCTTTGAGTGTGACGACGTCGATAAGCGATACGCTGTCGCTCTTCATGTTCGCGATATAGAGCGTCCGGCCATCAGGGCTCAAGCGCAGCCCATGGGGATAACGCCCAGTTGGAATACCGGGCAACTCGATTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6146823‑6146976 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgattcCGCTGCCAACCGGGTACGAATATTTGACCTTGAGCAGCGAATCGAGTTGCCCGGTATTCCAACTGGGCGTTATCCCCATGGGCTGCGCTTGAGCCCTGATGGCCGGACGCTCTATATCGCGAACATGAAGAGCGACAGCGTATCGCT  <  NC_002947/6147014‑6146868                                                                                                                                                                                                                                                                                                               CCTACGGGAATCTGCGCGGTTTCTTTGAGTGTGACGACGTCGATAAGCGATACGCTGTCGCTCTTCATGTTCGCGATATAGAGCGTCCGGCCATCAGGGCTCAAGCGCAGCCCATGGGGATAACGCCCAGTTGGAATACCGGGCAACTCG                                                                                                                                                         >  2:1582863/1‑150  CTACGGGAATCTGCGCGGTTTCTTTGAGTGTGACGACGTCGATAAGCGATACGCTGTCGCTCTTCATGTTCGCGATATAGAGCGTCCGGCCATCAGGGCTCAAGCGCAGCCCATGGGGATAACGCCCAGTTGGAATACCGGGCAACTCGA                                                                                                                                                        >  2:2199193/1‑150  CTACGGGAATCTGCGCGGTTTCTTTGAGTGTGACGACGTCGATAAGCGATACGCTGTCGCTCTTCATGTTCACGATATAGAGCGTCCGGCCATCAGGGCTCAAGCGCAGCCCATGGGGATAACGCCCAGTTGGAATACCGGGCAACTCGc                                                                                                                                                        >  2:1462245/1‑149     CGGGAATCTGCGCGGTCTCTTTGAGTGTGACGACGTCGATAAGCGATACGCTGTCGCTCTTCATGTTCGCGATATAGAGCGTCCGGCCATCAGGGCTCAAGCGCAGCCCATGGGGATAACGCCCAGTTGGAATACCGGGCAACTCGATTC                                                                                                                                                     >  2:116210/1‑150                                  ACGACGTCGATAAGCGATACGCTGTCGCTCTTCATGTTCGCGATATAGAGCGTCCGGCCATCAGGGCTCAAGCGCAGCCCATGGGGATAACGCCCAGTTGGAATACCGGGCAACTCGATT                                                                                                                                                      <  2:385995/120‑1                                  ACGACGTCGATAAGCGATACGCTGTCGCTCTTCATGTTCGCGATATAGAGCGTCCGGCCATCAGGGCTCAAGCGCAGCCCATGGGGATAACGCCCAGTTGGAATACCGGGCAACTCGATT                                                                                                                                                      >  1:385995/1‑120                                                   TACGCTGTCGCTCTTCATGTTCGCGATATAGAGCGTCCGGCCATCAGGGCTCAAGCGCAGCCCATGGGGATACCGCCCAGTTGGAATACCGGGCAAGTCGATTCCGCTGCCAACCGGGTACGAATATTTGACCTTGAGCAGCGAATCGAG                                                                                                       <  1:887380/150‑1                                                      GCTGTCGCTCTTCATGTTCGCGATATAGAGCGTCCGGCCATCAGGGCTCAAGCGCAGCCCATGGGGATAACGCCCAGTTGGAATACCGGGCAACTCGA                                                                                                                                                        >  1:1608124/1‑98                                                      GCTGTCGCTCTTCATGTTCGCGATATAGAGCGTCCGGCCATCAGGGCTCAAGCGCAGCCCATGGGGATAACGCCCAGTTGGAATACCGGGCAACTCGA                                                                                                                                                        <  2:1608124/98‑1                                                                      TTCGCGATATAGAGCGTCCGGCCATCAGGGCTCAAGCGCAGCCCATGGGGATAACGCCCAGTTGGAATACCGGGCAACTCGATTCCGCTGCCAACCGGGTACGAATATTTGACCTTGAGCAGCGAAT                                                                                                           <  1:1435584/127‑1                                                                      TTCGCGATATAGAGCGTCCGGCCATCAGGGCTCAAGCGCAGCCCATGGGGATAACGCCCAGTTGGAATACCGGGCAACTCGATTCCGCTGCCAACCGGGTACGAATATTTGACCTTGAGCAGCGAAT                                                                                                           >  2:1435584/1‑127                                                                                                                                                     CGATTCCGCTGCCAACCGGGTACGAATATTTGACCTTGAGCAGCGAATCGAGTTGCCCGGTATTCCAACTGGGCGTTATCCCCATGGGCTGCGCTTGAGCCCTGATGGCCGGACGCTCTATATCGCGAACATGAAGAGCGACAGCGTATC     >  1:116210/1‑150                                                                                                                                                      GATTCCGCTGCCAACCGGGTACGAATATTTGACCTTGAGCAGCGAATCGAGTTGCCCGGTATTCCAACTGGGCGTTATCCCCATGGGCTGCGCTTGAGCCCTGATGGCCGGACGCTCTATATCGCGAACATGAAGAGCGACAGCGTATCG    >  2:755966/1‑150                                                                                                                                                      GATTCCGCTGCCAACCGGGTACGAATATTTGACCTTGAGCAGCGAATCGAGTTGCCCGGTATTCCAACTGGGCGTTATCCCCATGGGCTGCGCTTGAGCCCTGATGGCCGGACGCTCTATATCGCGAACATGAAGAGCGACAGCGTATCG    >  2:1049457/1‑150                                                                                                                                                       ATTCCGCTGCCAACCGGGTACGAATATTTGACCTTGAGCAGCGAATCGAGTTGCCCGGTATTCCAACTGGGCGTTATCCCCATGGGCTGCGCTTGAGCCCTGATGGCCGGACGCTCTATATCGCGAACATGAAGAGCGACAGCGTATCGC   >  2:1151363/1‑150                                                                                                                                                       ATTCCGCTGCCAACCGGGTACGAATATTTGACCTTGAGCAGCGAATCGAGTTGCCCGGTATTCCAACTGGGCGTTATCCCCATGGGCTGCGCTTGAGCCCTGATGGCCGGACGCTCTATATCGCGAACATGAAGAGCGACAGCGTATCGC   >  1:39758/1‑150                                                                                                                                                       ATTCCGCTGCCAACCGGGTACGAATATTTGACCTTGAGCAGCGAATCGAGTTGCCCGGTATTCCAACTGGGCGTTATCCCCATGGGCTGCGCTTGAGCCCTGATGGCCGGACGCTCTATATCGCGAACATGAAGAGCGACAGCGTATCGC   <  1:2259449/150‑1                                                                                                                                                       ATTCCGCTGCCAACCGGGTACGAATATTTGACCTTGAGCAGCGAATCGAGTTGCCCGGTATTCCAACTGGGCGTTATCCCCATGGGCTGCGCTTGAGCCCTGATGGCCGGACGCTCTATATCGCGAACATGAAGAGCGACAGCGTATCGC   <  1:1123173/150‑1                                                                                                                                                        TTCCGCTGCCAACCGGGTACGAATATTTGACCTTGAGCAGCGAATCGAGTTGCCCGGTATTCCAACTGGGCGTTATCCCCATGGGCTGCGCTTGAGCCCTGATGGCCGGACGCCCTATATCGCGAACATGAAGAGCGACAGCGTATCGCT  >  1:1194771/1‑150                                                                                                                                                                                                                                                                                                               CCTACGGGAATCTGCGCGGTTTCTTTGAGTGTGACGACGTCGATAAGCGATACGCTGTCGCTCTTCATGTTCGCGATATAGAGCGTCCGGCCATCAGGGCTCAAGCGCAGCCCATGGGGATAACGCCCAGTTGGAATACCGGGCAACTCGATTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6146823‑6146976 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgattcCGCTGCCAACCGGGTACGAATATTTGACCTTGAGCAGCGAATCGAGTTGCCCGGTATTCCAACTGGGCGTTATCCCCATGGGCTGCGCTTGAGCCCTGATGGCCGGACGCTCTATATCGCGAACATGAAGAGCGACAGCGTATCGCT  <  NC_002947/6147014‑6146868

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.