New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 257716785 (0.910)6 (0.070) 4/228 NT 7.1% coding (1271/1776 nt) PP_2259 sigma‑54 dependent transcriptional regulator
?NC_002947 = 2577215 80 (0.940)coding (1223/1776 nt) PP_2259 sigma‑54 dependent transcriptional regulator

Only 100 of 139 total aligned reads displayed.

CGCGCAGGGGAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCG  >  NC_002947/2577021‑2577316
                                                                                                                                                  |                                                                                                                                                     
cgcgCAGGGGAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCg                                                                                                                                                    <  1:2147741/150‑1 (MQ=255)
  cgcAGGGGAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGc                                                                                                                                                  <  2:930567/150‑1 (MQ=255)
   gcAGGGGAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCTAGCGGCt                                                                                                                                                 <  2:1581532/150‑1 (MQ=255)
       gggAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTGGGATCAGTTGTGATTGCTTACCCGGATTTGTCAAATATCCGTCGGCACCGTTTCGCCACTGCCCAGCGGCTGGAt                                                                                                                                             <  1:45521/150‑1 (MQ=255)
          aGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGAtgct                                                                                                                                          <  1:2356698/150‑1 (MQ=255)
            gcagcaCCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGAtgctgc                                                                                                                                        >  2:172822/1‑150 (MQ=255)
                caCCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGAtgctgc                                                                                                                                        <  1:1725452/146‑1 (MQ=255)
                caCCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGAtgctgc                                                                                                                                        >  2:1725452/1‑146 (MQ=255)
                caCCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGa                                                                                                                                    >  2:608983/1‑150 (MQ=255)
                 aCCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGAc                                                                                                                                   >  1:1019486/1‑150 (MQ=255)
                   cAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTg                                                                                                                                 >  1:985817/1‑150 (MQ=255)
                     gCGTCAGGCCGGCGATGCGGTAGTACAGGGCCTTGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCa                                                                                                                               <  1:1085007/150‑1 (MQ=255)
                            gCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTAcgcg                                                                                                                        >  1:2260851/1‑150 (MQ=255)
                            gCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTAcgcg                                                                                                                        >  2:1049486/1‑150 (MQ=255)
                             ccGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACgcgc                                                                                                                       >  2:1305442/1‑150 (MQ=255)
                                  gATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTAc                                                                                                                           <  2:2453045/141‑1 (MQ=255)
                                  gATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTAc                                                                                                                           >  1:2453045/1‑141 (MQ=255)
                                  gATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGcagcag                                                                                                                  <  2:2260851/150‑1 (MQ=255)
                                      cGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGTCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCgg                                                                                                              <  2:927851/150‑1 (MQ=255)
                                              cAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGt                                                                                                      >  1:1813797‑M2/1‑149 (MQ=255)
                                               aGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGtg                                                                                                     <  2:120727‑M2/150‑3 (MQ=255)
                                                ggTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGtgg                                                                                                    >  1:672854‑M2/1‑147 (MQ=255)
                                                 gTCCTGGCGAAAGCGCCGGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGtggg                                                                                                   <  1:191235‑M2/150‑5 (MQ=255)
                                                  tcgtGGCGAAAGCGCCCGGCGAGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGc                                                                                                  >  2:364922/4‑150 (MQ=255)
                                                  tCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGtgggc                                                                                                  <  1:1008184‑M2/150‑6 (MQ=255)
                                                  gccggtcgaaagcGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTTGCCACTGCCCAcccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggc                                                                                                  >  2:2181035‑M1/7‑97 (MQ=255)
                                                    cTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGtgggcag                                                                                                <  1:1160926‑M2/150‑8 (MQ=255)
                                                     tGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAcccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagt                                                                                               <  1:237297‑M1/150‑57 (MQ=255)
                                                     tGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGtgggcagt                                                                                               >  2:943450‑M2/1‑142 (MQ=255)
                                                      ggCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCCATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTTCGCGCAGCAGGCGGGCCTGGGtgggcagtg                                                                                              >  2:1408607‑M2/1‑141 (MQ=255)
                                                       gCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGtgggcagtgg                                                                                             <  1:1031443‑M2/150‑11 (MQ=255)
                                                        cGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGtgggcagtggc                                                                                            >  1:172822‑M2/1‑139 (MQ=255)
                                                         gAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCgca                                                                                                                      <  1:1541500/123‑1 (MQ=255)
                                                           aaGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAcccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtggcgaa                                                                                         <  1:1037924‑M1/150‑63 (MQ=255)
                                                            aGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGt                                                                                        <  2:1160926/150‑1 (MQ=255)
                                                               gcacggcGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAcccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtg                                                                                              >  2:875423‑M1/4‑84 (MQ=255)
                                                                cccGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTTGCCACTGCCCAcccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtggcgaaccggt                                                                                    <  1:2181035‑M1/150‑68 (MQ=255)
                                                                cccGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGcc                                                                                    >  2:2390121/1‑150 (MQ=255)
                                                                 ccGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCa                                                                                   >  1:547496/1‑150 (MQ=255)
                                                                        gcACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCAt                                                                            >  2:390173/1‑150 (MQ=255)
                                                                         cACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATc                                                                           <  1:608983/150‑1 (MQ=255)
                                                                           cTTCGTCGGCCAGGTTGCGATTGCTCGCCGCCAACAGGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCa                                                                         >  1:2411095/1‑150 (MQ=255)
                                                                            ttCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAg                                                                        >  1:1370859/1‑150 (MQ=255)
                                                                                  ggCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAg                                                                  <  2:2223474/150‑1 (MQ=255)
                                                                                    ccAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGa                                                                >  2:164899/1‑150 (MQ=255)
                                                                                         ttGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTTCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCg                                                           <  2:191235/150‑1 (MQ=255)
                                                                                         ttGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCATTCTCATCCAGAAACAGGATGCCg                                                           >  2:552729/1‑150 (MQ=255)
                                                                                         ttGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCg                                                           >  1:263488/1‑150 (MQ=255)
                                                                                              aTTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGc                                                                                                            <  1:2374591/96‑1 (MQ=255)
                                                                                              aTTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGc                                                                                                            >  2:2374591/1‑96 (MQ=255)
                                                                                               ttGCTCGCCGACACCACGCGGATATCCACCGGCCCCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACTCTCAGCAGGCGGGCCTGGGGGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCg                                                     >  2:270986/1‑150 (MQ=255)
                                                                                                       cGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCg                                             <  1:2187785/150‑1 (MQ=255)
                                                                                                        gACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTAcgcg                                                                                                                        <  1:1425060/74‑1 (MQ=255)
                                                                                                        gACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTAcgcg                                                                                                                        >  2:1425060/1‑74 (MQ=255)
                                                                                                        gACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCgg                                            >  1:2350861/1‑150 (MQ=255)
                                                                                                          caccacGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGAt                                          <  2:1008184/150‑1 (MQ=255)
                                                                                                          caccacGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGAt                                          <  1:175353/150‑1 (MQ=255)
                                                                                                             cacGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAg                                       >  2:78295/1‑150 (MQ=255)
                                                                                                              acGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGt                                      >  1:689152/1‑150 (MQ=255)
                                                                                                              acGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGt                                      >  1:689664/1‑150 (MQ=255)
                                                                                                                   gctatCCACCGGCAACTGTTCGCCACTGTCCAGCTGCGGTATGCTGCGCGACTGCAGTACGCGCAGCAGCCCGGCCTGCGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCgg                                 <  1:2252530/148‑1 (MQ=255)
                                                                                                                   gATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCgg                                 <  2:165066/150‑1 (MQ=255)
                                                                                                                      atCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGtt                              <  2:1370859/150‑1 (MQ=255)
                                                                                                                       tCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTg                             <  2:689664/150‑1 (MQ=255)
                                                                                                                       tCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTg                             <  2:689152/150‑1 (MQ=255)
                                                                                                                          accggcaccggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGAt                                          <  1:1610731/134‑1 (MQ=255)
                                                                                                                          accggcaccggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGAt                                          >  2:1610731/1‑134 (MQ=255)
                                                                                                                           ccggcaccggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCt                         <  1:120727/150‑1 (MQ=255)
                                                                                                                            cggcaccggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCtt                        >  1:911663/1‑150 (MQ=255)
                                                                                                                             ggcaccggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTtg                       <  2:1589536/150‑1 (MQ=255)
                                                                                                                              gcaccggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCtgg                                                                                                        <  2:1079918/68‑1 (MQ=255)
                                                                                                                              gcaccggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTtgt                      <  1:1366396/150‑1 (MQ=255)
                                                                                                                                accggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGtgggcagtggcaaaccggtgccggtggatatccgcgtggtgtcggcgagcaatcgcaacctggccgacgaagtgcgcgccggg                    <  1:2181035‑M2/150‑84 (MQ=255)
                                                                                                                                accggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTgtgg                    >  2:2295933/1‑150 (MQ=255)
                                                                                                                                 ccggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTgtggt                   <  1:78295/150‑1 (MQ=255)
                                                                                                                                  cggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGcc                           <  2:466792/141‑1 (MQ=255)
                                                                                                                                  cggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAAGACGTCGTGGTCGGCCTTGCGGATCAGCCCCGGGTTGCCCTTgtggtg                  <  1:552729/150‑1 (MQ=255)
                                                                                                                                   ggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGtggg                                                                                                   <  1:1764884‑M2/68‑5 (MQ=255)
                                                                                                                                   ggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGtggg                                                                                                   >  2:1764884‑M2/1‑64 (MQ=255)
                                                                                                                                   ggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGtggtgg                 <  2:2391634/150‑1 (MQ=255)
                                                                                                                                   ggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGtggtgg                 <  2:1435066/150‑1 (MQ=255)
                                                                                                                                   ggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGtggtgg                 <  2:1160438/150‑1 (MQ=255)
                                                                                                                                    gTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGtggtgg                 <  1:780097/149‑1 (MQ=255)
                                                                                                                                     ttCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGtgggcagtggcgaaccggtgccggtggatatccgcgtggtgtcggcgagcaatcgcaacctggccgacgaagtgcgcgccgggcgctt               <  1:1037924‑M2/150‑89 (MQ=255)
                                                                                                                                        gCCACTGCCCAcccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtggcgaaccggtgccggtggatatccgcgtggtgtcggcgagcaatcgcaacctggccgacgaagtgcgcgccgggcgctttcg            >  1:172822‑M1/1‑11 (MQ=255)
                                                                                                                                          cACTGCCCAcccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtggcgaaccggtgccggtggatatccgcgtggtgtcggcgagcaatcgcaacctggccgacgaagtgcgcgccgggcgctttcgcc          >  2:1128729‑M1/1‑9 (MQ=255)
                                                                                                                                          cACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGtgggcagtggcgaaccggtgccggtggatatccgcgtggtgtcggcgagcaatcgcaacctggccgacgaagtgcgcgccgggc                   <  1:875423‑M2/141‑85 (MQ=255)
                                                                                                                                           aCTGCCCAcccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtggcgaaccggtgccggtggatatccgcgtggtgtcggcgagcaatcgcaacctggccgacgaagtgcgcgccgggcgctttcgcca         >  2:943450‑M1/1‑8 (MQ=255)
                                                                                                                                            cTGCCCAcccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtggcgaaccggtgccggtggatatccgcgtggtgtcggcgagcaatcgcaacctggccgacgaagtgcgcgccgggcgctttcgccag        <  1:1160926‑M1/150‑144 (MQ=255)
                                                                                                                                            cTGCCCAcccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtggcgaaccggtgccggtggatatccgcgtggtgtcggcgagcaatcgcaacctggccgacgaagtgcgcgccgggcgctttcgccag        <  1:1160438‑M1/150‑144 (MQ=255)
                                                                                                                                              gCCCAcccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtggcgaaccggtgccggtggatatccgcgtggtgtcggcgagcaatcgcaacctggccgacgaagtgcgcgccgggcgctttcgccagga      <  1:1008184‑M1/150‑146 (MQ=255)
                                                                                                                                               cccacccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtggcgaaccggtgccggtggatatccgcgtggtgtcggcgagcaatcgcaacctggccgacgaagtgcgcgccgggcgctttcgcca         <  1:932667‑M1/146‑143 (MQ=255)
                                                                                                                                               cccacccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtggcgaaccggtgccggtggatatccgcgtggtgtcggcgagcaatcgcaacctggccgacgaagtgcgcgccgggcgctttcgcca         >  2:932667‑M1/1‑4 (MQ=255)
                                                                                                                                               cccacccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtggcgaacc                                                                                       >  2:1764884‑M1/1‑4 (MQ=255)
                                                                                                                                                ccacccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtggcgaaccggtgccggtggatatccgcgtggtgtcggcgagcaatcgcaacctggccgacgaagtgcgcgccgggcgctttcgccaggacc    >  1:672854‑M1/1‑3 (MQ=255)
                                                                                                                                                 cAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGa                                                                <  2:730237/89‑1 (MQ=255)
                                                                                                                                                 cAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAAcgc   >  1:706507/1‑150 (MQ=255)
                                                                                                                                                  acccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtggcgaaccggtgccggtggatatccgcgtggtgtcggcgagcaatcgcaacctggccgacgaagtgcgcgccgggcgctttcgccaggacctg  >  1:1813797‑M1/1‑1 (MQ=255)
                                                                                                                                                  acccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtggcgaaccggtgccggtggatatccgcgtggtgtcggcgagcaatcgcaacctggccgacgaagtgcgcgccgggcgctttcgccag        >  1:1727850‑M1/1‑1 (MQ=255)
                                                                                                                                                  acccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtggcgaaccggtgccggtggatatccgcgtggtgtcggcgagcaatcgcaacctggccgacgaagtgcgcgccgggcgctttcgccag        <  2:1727850‑M1/144‑144 (MQ=255)
                                                                                                                                                  |                                                                                                                                                     
CGCGCAGGGGAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCG  >  NC_002947/2577021‑2577316

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.