New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2614065 =83 (0.890)4 (0.040) 4/240 NT 5.1% coding (2961/4710 nt) PP_2287 internal core protein
?NC_002947 2614092 = 69 (0.770)coding (2988/4710 nt) PP_2287 internal core protein

Only 100 of 103 total aligned reads displayed.

AAGTGGAACTCCATGGTCAACACCTGGGGCCATGAAGCTGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAGAGGAGGCCGTCCGGGTCATGGACGATATGCTGCCCACGAAGGGGACTGATGCGGG  >  NC_002947/2613916‑2614214
                                                                                                                                                     |                                                                                                                                                     
aaGTGGAACTCCATGGTCAACACCTGGTGCCATGAAGCTGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCg                                                                                                                                                       >  2:2222294/1‑150 (MQ=255)
aaGTGGAACTCCATGGTCAACACCTGGGGCCATGAAGCTGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCg                                                                                                                                                       >  1:1917614/1‑150 (MQ=255)
  ttcttgaggcttgaggcagtacgccccgcatcagtccccttcgtgggcagcatatcgtccatgacccggacggcctcctcttcggagtaaccgccattgagcatcagcgagtgcttcaaggcttcccggtcggtgcccatcatcatgGaa                                                                                                                                                     >  2:1366961‑M1/148‑150 (MQ=255)
  ttcttgaggcttgaggcagtacgccccgcatcagtccccttcgtgggcagcatatcgtccatgacccggacggcctcctcttcggagtaaccgccattgagcatcagcgagtgcttcaaggcttcccggtcggtgcccatcatcatgGaa                                                                                                                                                     >  2:353854‑M1/148‑150 (MQ=255)
  gTGGAACTCCATGGTCAACACCTGGGGCCATGAAGCTGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGaa                                                                                                                                                     <  1:516949/150‑1 (MQ=255)
  gTGGAACTCCATGGTCAACACCTGGGGCCATGAAGCTGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGaa                                                                                                                                                     >  1:330797/1‑150 (MQ=255)
  gTGGAACTCCATGGTCAACACCTGGGGCCATGAAGCTGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTAAGGTTGGACTGTCGAAGAGGCCCATGCGaa                                                                                                                                                     <  1:2276756/150‑1 (MQ=255)
   tcttgaggcttgaggcagtacgccccgcatcagtccccttcgtgggcagcatatcgtccatgacccggacggcctcctcttcggagtaaccgccattgagcatcagcgagtgcttcaaggcttcccggtcggtgcccatcatcatgGAAc                                                                                                                                                    >  1:1461083‑M1/147‑150 (MQ=255)
   tGGAACTCCATGGTCAACACCTGGGGCCATGAAGCTGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAAc                                                                                                                                                    <  2:353810/150‑1 (MQ=255)
    ggAACTCCATGGTCAACACCTGGGGCCATGCAGCTGTCACCGGCTGGTGGGCTAGGGCGTATTAGGGAGCCCGTGAGGGCATCTCGGATGGGGCCGCCAACCGCTTGGCGAAGTGTTACGTTCGGACTGTCCACGAGGCGAATGTGAAcc                                                                                                                                                   >  2:1093559/1‑150 (MQ=255)
     gAACTCCATGGTCAACACCTGGGGCCATGAAGCTGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAAc                                                                                                                                                    <  1:1522735/148‑1 (MQ=255)
         tCCATGGTCAACACCTGGGGCCATGAAGCTGTCACCGGCTGGTGGGCGAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACcgcacg                                                                                                                                              >  2:1728235/1‑150 (MQ=255)
            aTGNTCAACACCTGGGGCCATGAAGCTGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAg                                                                                                                                           >  2:1505344/1‑150 (MQ=255)
            aTGGTCAACACCTGGATCCATGAAGCTGTAACCGGATGGTTGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAg                                                                                                                                           >  1:1662927/1‑150 (MQ=255)
               gTCAACACCTGGGGCCATGAAGCTGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGAc                                                                                                                                        >  2:1139545/1‑150 (MQ=255)
                 cAACACCTGGGGCCATGAAGCTGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGAcgc                                                                                                                                      >  2:2009256/1‑150 (MQ=255)
                   acacCTGGGGCCATGAAGCTGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGa                                                                                                                                    <  2:588246/150‑1 (MQ=255)
                   acacCTGGGGCCATGAAGCTGTCACCGGCTGGTGGGCTAGGGCGTAGCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGACGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGa                                                                                                                                    <  2:145168/150‑1 (MQ=255)
                     acCTGGGGCCATGAAGCTGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATg                                                                                                                                  <  2:1917614/150‑1 (MQ=255)
                     acCTGGGGCCATGAAGCTGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAAAAATAGTCGAACCGCACGCAGGACGCGATg                                                                                                                                  >  1:1817712/1‑150 (MQ=255)
                      ccTGGGGCCATGAAGCTGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATgg                                                                                                                                 <  2:330797/150‑1 (MQ=255)
                       cTGGGGCCATGAAGCTGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATggg                                                                                                                                >  2:1838377/1‑150 (MQ=255)
                           ggCCATGAAGCGGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGGGGTACGCTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTcc                                                                                                                            <  1:52274/150‑1 (MQ=255)
                            gCCATGAAGCTGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCa                                                                                                                           >  2:1336986/1‑150 (MQ=255)
                             ccATGAAGCTGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCat                                                                                                                          <  1:1728235/150‑1 (MQ=255)
                                  aaGCTGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCatgatga                                                                                                                     <  1:1644964/150‑1 (MQ=255)
                                    gCTGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCatgatgatg                                                                                                                   <  2:1681169/150‑1 (MQ=255)
                                     cTGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATgg                                                                                                                  <  1:1838377/150‑1 (MQ=255)
                                     cTGTCACCGGATGGTGGGCAAGGGCCTGTCCGGGCGACCGTGAGGGCATCCCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATgg                                                                                                                  <  2:723268/150‑1 (MQ=255)
                                      tGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATggg                                                                                                                 <  1:284836/150‑1 (MQ=255)
                                        tCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCa                                                                                                               >  2:644211/1‑150 (MQ=255)
                                         cACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCac                                                                                                              <  2:1781359/150‑1 (MQ=255)
                                          aCCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGAt                                                                                                                                   >  2:1647054/1‑128 (MQ=255)
                                          aCCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGAt                                                                                                                                   <  1:1647054/128‑1 (MQ=255)
                                                   tggGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGGGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGaa                                                                                                    <  2:1912058/150‑1 (MQ=255)
                                                        tcgtccatgacccggacggcctcctcttcggagtaaccgccattgagcatcagcgagtgcttcaaggcttcccggtcggtgcccatcatcatgGAACCGCACGCAGGACGCGATGGGTTCCATGATGATgg                                                                                                                  >  1:1130803‑M1/94‑131 (MQ=255)
                                                        tcgtccatgacccggacggcctcctcttcggagtaaccgccattgagcatcagcgagtgcttcaaggcttcccggtcggtgcccatcatcatgGAACCGCACGCAGGACGCGATGGGTTCCATGATGATgg                                                                                                                  <  2:1130803‑M1/38‑1 (MQ=255)
                                                           ggCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGaa                                                                                            <  1:2064758/150‑1 (MQ=255)
                                                            gCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAg                                                                                           <  2:2107315/150‑1 (MQ=255)
                                                            gCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGACACGTGCCATGATGATGGGCACCGACCGGGAAGCCTTGAAg                                                                                           >  1:124019/1‑150 (MQ=255)
                                                              gTATCAGGGCGCCCGTGAGGGCCTCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCa                                                                                         <  1:204909/150‑1 (MQ=255)
                                                                 tCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTc                                                                                      >  1:1336753/1‑150 (MQ=255)
                                                                 tCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTc                                                                                      >  2:1358978/1‑150 (MQ=255)
                                                                 tCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTc                                                                                      >  1:738518/1‑150 (MQ=255)
                                                                 tCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTc                                                                                      >  1:1276412/1‑150 (MQ=255)
                                                                   aGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCatgatga                                                                                                                     >  2:565865/1‑117 (MQ=255)
                                                                   aGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCatgatga                                                                                                                     <  1:565865/117‑1 (MQ=255)
                                                                   aGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCt                                                                                                >  1:1429968/1‑138 (MQ=255)
                                                                   aGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCt                                                                                                <  2:1429968/138‑1 (MQ=255)
                                                                   aGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGc                                                                                    >  1:1805261/1‑150 (MQ=255)
                                                                    gggAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCt                                                                                   >  1:1979218/1‑150 (MQ=255)
                                                                      gAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTCCCat                                                                                                                          <  1:971102/109‑1 (MQ=255)
                                                                      gAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTAGAAGACGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGa                                                                                 <  2:467139/150‑1 (MQ=255)
                                                                        gCCCGTGAGGGCATCTCGGATGAGACCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCAAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATg                                                                               <  2:1211127/150‑1 (MQ=255)
                                                                                  gCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCg                                                                     <  1:945977/150‑1 (MQ=255)
                                                                                  gCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCg                                                                     <  1:1506452/150‑1 (MQ=255)
                                                                                  gCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCg                                                                     <  2:2076509/150‑1 (MQ=255)
                                                                                    aTCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACTGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGt                                                                   <  2:2399551/150‑1 (MQ=255)
                                                                                    aTCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGc                                                                                                  <  2:152104/119‑1 (MQ=255)
                                                                                    aTCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGc                                                                                                  >  1:152104/1‑119 (MQ=255)
                                                                                     tctcGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGtt                                                                  >  1:1787409/1‑150 (MQ=255)
                                                                                       tcGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAg                                                                                                   <  1:68448/115‑1 (MQ=255)
                                                                                       tcGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAg                                                                                                   >  2:68448/1‑115 (MQ=255)
                                                                                        cGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACt                                                               <  2:608953/150‑1 (MQ=255)
                                                                                             cgccattgagcatcagcgagtgcttcaaggcttcccggtcggtgcccatcatcatgGAACCGCACGCAGGACGCGATggg                                                                                                                                <  2:136419‑M1/24‑1 (MQ=255)
                                                                                             cgccattgagcatcagcgagtgcttcaaggcttcccggtcggtgcccatcatcatgGAACCGCACGCAGGACGCGATggg                                                                                                                                >  1:136419‑M1/57‑80 (MQ=255)
                                                                                                gccgccAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAagag                                                       >  1:629794/1‑150 (MQ=255)
                                                                                                  cgccAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTg                                                                                              <  1:2049357/109‑1 (MQ=255)
                                                                                                  cgccAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTg                                                                                              >  2:2049357/1‑109 (MQ=255)
                                                                                                   gccAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGCGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAgaggag                                                    <  1:1093559/150‑1 (MQ=255)
                                                                                                   gccAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGAACGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAgaggag                                                    <  1:170616/150‑1 (MQ=255)
                                                                                                      aaCCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAGAGGAGGcc                                                 >  2:1527938/1‑150 (MQ=255)
                                                                                                       aCCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATgg                                                                       >  1:2067689/1‑127 (MQ=255)
                                                                                                       aCCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATgg                                                                       <  2:2067689/127‑1 (MQ=255)
                                                                                                         cGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAGAGGAGGCCGTc                                              <  2:1276412/150‑1 (MQ=255)
                                                                                                         cGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCGGATGCTCAATGGCGGTTACTCCGAAGAGGAGGCCGTc                                              >  1:2344319/1‑150 (MQ=255)
                                                                                                            tGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAGAGGAGGCCGTCCgg                                           >  1:5752/1‑150 (MQ=255)
                                                                                                               gCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAGAGGAGGCCGTCCGGGTc                                        <  2:1979218/150‑1 (MQ=255)
                                                                                                                 gAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCaa                                                                          >  2:1785473/1‑114 (MQ=255)
                                                                                                                 gAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCaa                                                                          <  1:1785473/114‑1 (MQ=255)
                                                                                                                    gTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAGAGGAGGCCGTCCGGGTCATGGa                                   <  2:1805261/150‑1 (MQ=255)
                                                                                                                        tACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCCACCCCGGCGAAGCCGTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAGAGGAGGCCGTCCGGGTCATGGACGat                               <  2:1662927/150‑1 (MQ=255)
                                                                                                                          cGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAGAGGAGGCCGTCCGGGTCATGGACGatat                             <  2:738518/150‑1 (MQ=255)
                                                                                                                           gTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAGAGGAGGCCGTCCGGGTCATGGACGATAtg                            >  1:295848/1‑150 (MQ=255)
                                                                                                                           gTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAGAGGAGGCCGTCCGGGTCATGGACGATAtg                            >  1:28843/1‑150 (MQ=255)
                                                                                                                             tCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAGAGGAGGCCGTCCGGGTCATGGACGATAtgct                          <  2:28843/150‑1 (MQ=255)
                                                                                                                               ggACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCatga                                                                                                                        >  2:2077582/1‑54 (MQ=255)
                                                                                                                               ggACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCatga                                                                                                                        <  1:2077582/54‑1 (MQ=255)
                                                                                                                                gACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAGAGGAGGCCGTCCGGGTCATGGACGATATGCTGcc                       >  2:1108031/1‑150 (MQ=255)
                                                                                                                                   tGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAGAGGAGGCCGTCCGGGTCATGGACGATATGCTGCCCAc                    >  1:607941/1‑150 (MQ=255)
                                                                                                                                   tGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAGAGGAGGCCGTCCGGGTCATGGACGATATGCTGCCCAc                    <  1:2222294/150‑1 (MQ=255)
                                                                                                                                          gagGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAGAGGAGGCCGTCCGGGTCATGGACGATATGCTGCCCACGAAgggg             >  2:804396/1‑150 (MQ=255)
                                                                                                                                               ccATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAGaggagg                                                   >  2:1234459/1‑107 (MQ=255)
                                                                                                                                               ccATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAGaggagg                                                   <  1:1234459/107‑1 (MQ=255)
                                                                                                                                               ccATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAGAGGAGGCCGTCCGGGt                                         <  2:103191/117‑1 (MQ=255)
                                                                                                                                               ccATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAGAGGAGGCCGTCCGGGt                                         >  1:103191/1‑117 (MQ=255)
                                                                                                                                                cATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAGAGGAGGCCGTCCGGGTCATGGACGATATGCTGCCCACGAAGGGGACTGAt       >  1:1543654/1‑150 (MQ=255)
                                                                                                                                                    cGAACCGCACGCAGGAAACACTGCATACCAGGTGTATGGCCACCGACCGGGCAGTCTTGAGGGTTTCCCTGTTGCACAATGGCGGTTACTCCGAAGAGGAGGCCGTCCGGGTCATGGACGATATGCTGCCCACGAAGGGGACTGATGCgg   <  1:644211/150‑1 (MQ=255)
                                                                                                                                                     GAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAGAGGAGGCCGTCCGGGTCATGGACGATATGCTGCCCACGAAGGGGACTGATGCggg  <  2:1291887‑M1/150‑1 (MQ=255)
                                                                                                                                                     GAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAGAGGAGGCCGTCCGGGTCATGGACGATATGCTGCCCACGAAGGGGACTGATGCggg  <  1:2073426‑M1/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
AAGTGGAACTCCATGGTCAACACCTGGGGCCATGAAGCTGTCACCGGCTGGTGGGCTAGGGCGTATCAGGGAGCCCGTGAGGGCATCTCGGATGAGGCCGCCAACCGCTGGGCGAAGTGGTACGTTCGGACTGTCGAAGAGGCCCATGCGAACCGCACGCAGGACGCGATGGGTTCCATGATGATGGGCACCGACCGGGAAGCCTTGAAGCACTCGCTGATGCTCAATGGCGGTTACTCCGAAGAGGAGGCCGTCCGGGTCATGGACGATATGCTGCCCACGAAGGGGACTGATGCGGG  >  NC_002947/2613916‑2614214

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.