New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2664051 =42 (0.450)8 (0.110) 5/202 NT 21.9% intergenic (+33/‑130) prpC/acnA‑II methylcitrate synthase/aconitate hydratase
?NC_002947 2664132 = 23 (0.310)intergenic (+114/‑49) prpC/acnA‑II methylcitrate synthase/aconitate hydratase

CTGACCGGCTGGGCGGCGCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAA  >  NC_002947/2663902‑2664200
                                                                                                                                                     |                                                                                                                                                     
cTGACCGGCTGGGCGGCGCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAg                                                                                                                                                       <  1:1813431/150‑1 (MQ=255)
 tGACCGGCTGGGCGGCGCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAgg                                                                                                                                                      >  1:1832925/1‑150 (MQ=255)
 gccgtcgtaggcgccgggcttgatcgcctcgaccgccgcgcgggcgtcgaagtagtccaggtcggtgcctggcaggtgcttgcggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtgg                                                                                                                                                      >  1:118489‑M1/149‑150 (MQ=255)
 gccgtcgtaggcgccgggcttgatcgcctcgaccgccgcgcgggcgtcgaagtagtccaggtcggtgcctggcaggtgcttgcggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtgg                                                                                                                                                      >  2:599930‑M1/149‑150 (MQ=255)
           ggcggcGCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGcac                                                                                                                                            <  2:2332832/150‑3 (MQ=255)
           ggcggcGCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGt                                                                                                                                            <  2:897302/150‑1 (MQ=255)
             cggcgCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGTGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGc                                                                                                                                          <  1:749596/150‑1 (MQ=255)
                  gcttgatcgcctcgaccgccgcgcgggcgtcgaagtagtccaggtcggtgcctggcaggtgcttgcggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtGGGAGCGGGCGTGCCcg                                                                                                                                       >  2:874975‑M1/132‑148 (MQ=255)
                  gcttgatcgcctcgaccgccgcgcgggcgtcgaagtagtccaggtcggtgcctggcaggtgcttgcggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtGGGAGCGGGCGTGCCcg                                                                                                                                       <  1:874975‑M1/17‑1 (MQ=255)
                     tgatcgcctcgaccgccgcgcgggcgtcgaagtagtccaggtcggtgcctggcaggtgcttgcggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtGGGAGCGGGCGTGCCCGCGAAt                                                                                                                                  >  1:1389225‑M1/129‑150 (MQ=255)
                      gatcgcctcgaccgccgcgcgggcgtcgaagtagtccaggtcggtgccgggcaggtgcctgcggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtGGGAGCGGGCGTGCCCGCGAATg                                                                                                                                 >  2:1075303‑M1/128‑150 (MQ=255)
                          gcctcgaccgccgcgcgggcgtcgaagtagtccaggtcggtgcctggcaggtgcttgcggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtGGGAGCGGGCGTGCCCGCGAATGc                                                                                                                                >  2:344615‑M1/124‑147 (MQ=255)
                          gcctcgaccgccgcgcgggcgtcgaagtagtccaggtcggtgcctggcaggtgcttgcggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtGGGAGCGGGCGTGCCCGCGAATGc                                                                                                                                <  1:344615‑M1/24‑1 (MQ=255)
                           cctcgaccgccgcgcgggcgtcgaagtagtccaggtcggtgcctggcaggtgcttgcggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtGGGAGCGGGCGTGcc                                                                                                                                         <  2:240451‑M1/15‑1 (MQ=255)
                           cctcgaccgccgcgcgggcgtcgaagtagtccaggtcggtgcctggcaggtgcttgcggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtGGGAGCGGGCGTGcc                                                                                                                                         >  1:240451‑M1/123‑137 (MQ=255)
                               agcGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGcc                                                                                                                        <  1:845397/150‑1 (MQ=255)
                               agcGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGcc                                                                                                                        <  2:752476/150‑1 (MQ=255)
                                 cgcgcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGTGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCtt                                                                                                                      <  2:1234923/150‑1 (MQ=255)
                                 cgcgcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCtt                                                                                                                      <  2:645217/150‑1 (MQ=255)
                                         caacCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCAc                                                                                                              <  1:1426781/150‑1 (MQ=255)
                                         caacCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCAc                                                                                                              <  1:345895/150‑1 (MQ=255)
                                             cGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACtgtg                                                                                                          >  1:862027/1‑150 (MQ=255)
                                                   atcCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCa                                                                                                                               >  1:276317/1‑123 (MQ=255)
                                                   atcCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCa                                                                                                                               <  2:276317/123‑1 (MQ=255)
                                                    tcCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCtt                                                                                                                      <  1:2295471/131‑1 (MQ=255)
                                                    tcCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCtt                                                                                                                      >  2:2295471/1‑131 (MQ=255)
                                                       gCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCTCTGTGCACCTGCTGa                                                                                                <  2:212556/150‑1 (MQ=255)
                                                       gCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGa                                                                                                <  1:76031/150‑1 (MQ=255)
                                                       gCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTGCGTGCCTATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGa                                                                                                <  1:735508/150‑1 (MQ=255)
                                                        tccaggtcggtgcctggcaggtgcttgcggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtGGGAGcgggcacgc                                                                                                                                          >  2:1375732‑M1/94‑103 (MQ=255)
                                                        tccaggtcggtgcctggcaggtgcttgcggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtGGGAGcgggcacgc                                                                                                                                          <  1:1375732‑M1/14‑5 (MQ=255)
                                                        tccaggtcggtgcctggcaggtgcttgcggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtGGGAGc                                                                                                                                                  >  1:1525997‑M1/94‑99 (MQ=255)
                                                        tccaggtcggtgcctggcaggtgcttgcggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtGGGAGc                                                                                                                                                  <  2:1525997‑M1/6‑1 (MQ=255)
                                                        cccGAGCGCCGAGTATGAAACCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGAc                                                                                               <  1:121307/150‑1 (MQ=255)
                                                          caggtcggtgcctggcaggtgcttgcggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgaGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGc                                                                                             <  1:2062581‑M1/59‑1 (MQ=255)
                                                           gAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGa                                                                                                >  2:863760/1‑146 (MQ=255)
                                                           gAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGa                                                                                                <  1:863760/146‑1 (MQ=255)
                                                                ggtgcctggcaggtgcttgcggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTcgc                                                                                       <  1:893158‑M1/65‑1 (MQ=255)
                                                                ggtgcctggcaggtgcttgcggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTcgc                                                                                       >  2:2416846‑M1/86‑150 (MQ=255)
                                                                ccGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTcgc                                                                                       <  2:1360436/150‑1 (MQ=255)
                                                                  tgcctggcaggtgcttggggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg                                                                                     >  2:893158‑M1/84‑150 (MQ=255)
                                                                  tgcctggcaggtgcttgcggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg                                                                                     >  1:1285586‑M1/84‑150 (MQ=255)
                                                                  tgcctggcaggtgcttgcggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgaGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg                                                                                     >  2:2062581‑M1/84‑150 (MQ=255)
                                                                  gAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGGGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg                                                                                     <  1:1089492/150‑1 (MQ=255)
                                                                  gAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg                                                                                     <  2:862027/150‑1 (MQ=255)
                                                                   gcctggcaggtgcttgcggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg                                                                                     >  2:2418727‑M1/83‑149 (MQ=255)
                                                                   gcctggcaggtgcttgcggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg                                                                                     <  1:2418727‑M1/67‑1 (MQ=255)
                                                                   aGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCggg                                                                                                                                               >  2:227637/1‑91 (MQ=255)
                                                                   aGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCggg                                                                                                                                               <  1:227637/91‑1 (MQ=255)
                                                                            gCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCAt                                                                                           <  2:1736531/134‑1 (MQ=255)
                                                                            gCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCAt                                                                                           >  1:1736531/1‑134 (MQ=255)
                                                                                        gcCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg                                                                                     <  1:2107891/128‑1 (MQ=255)
                                                                                        gcCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg                                                                                     >  2:2107891/1‑128 (MQ=255)
                                                                                          cAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACctgc                                                                                                   <  1:148306/112‑1 (MQ=255)
                                                                                          cAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACctgc                                                                                                   >  2:148306/1‑112 (MQ=255)
                                                                                                     gATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAg                                                                   >  1:1189523/1‑133 (MQ=255)
                                                                                                     gATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAg                                                                   <  2:1189523/133‑1 (MQ=255)
                                                                                                                          tataGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCAcc                                                                                                      <  1:328409/77‑1 (MQ=255)
                                                                                                                          tataGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCAcc                                                                                                      >  2:328409/1‑77 (MQ=255)
                                                                                                                          tataGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGa                             >  1:1892558/1‑150 (MQ=255)
                                                                                                                            taGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACctg                                                                                                    <  2:1956497/77‑1 (MQ=255)
                                                                                                                            taGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACctg                                                                                                    >  1:1956497/1‑77 (MQ=255)
                                                                                                                                   gCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCatgat                    >  2:130788/1‑150 (MQ=255)
                                                                                                                                        ccGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAaca               >  1:88793/1‑150 (MQ=255)
                                                                                                                                               ccTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCat                       >  2:2059546/1‑135 (MQ=255)
                                                                                                                                               ccTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCat                       <  1:2059546/135‑1 (MQ=255)
                                                                                                                                                cTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTcgcg                                                                                      >  2:186718/1‑71 (MQ=255)
                                                                                                                                                cTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTcgcg                                                                                      <  1:186718/71‑1 (MQ=255)
                                                                                                                                                 ttGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCatga                     <  2:2001604/135‑1 (MQ=255)
                                                                                                                                                 ttGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCatga                     >  1:2001604/1‑135 (MQ=255)
                                                                                                                                                     GGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCaa  >  1:1350855‑M1/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CTGACCGGCTGGGCGGCGCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAA  >  NC_002947/2663902‑2664200

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.