New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5036635 | NA (NA) | 3 (0.030) | 3/232 | NT | NA | coding (78/336 nt) | PP_4442 | transposase |
? | NC_002947 | = 5036691 | NA (NA) | coding (134/336 nt) | PP_4442 | transposase |
GAGGGCTGCGCGCAATTTATCCGGGCTGTCGCTCAATGATCCGCATCGATGCGATCTGGCTGGCCACCGAGCCGATGGATATGCGCGCCGGCACCGAAACGGCATTGGCCCGGGTGATCGCGGTGTTCGGTGCGGCGAAGCCGCACTGCGCTTATCTGTTCGCCAATCGCCGGGCCAACCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAA > NC_002947/5036523‑5036764 | gaaggCTGCGCGCAATTTAGCCGGGCTGTCGCTCAATGATCCGCATCGATGCGATCTGGCTCGCCACCGAGCCGATAGATATGCGCGCCGGCACCGAAACGGCATTGGCCCGGGTGATCGCGGTGTTCGGTGCGGCTTCGCCGCAccgaa < 2:1190532/147‑5 (MQ=1) acagAAACGGCATTGGCCCGGGTGATCGCGGTGTTCGGTGCGGCGAAGCCGCACTGCGCTTATCTGTTCGCCAATCGCCGGGCCAACCGGATGGAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCaa > 1:614618/4‑150 (MQ=1) | GAGGGCTGCGCGCAATTTATCCGGGCTGTCGCTCAATGATCCGCATCGATGCGATCTGGCTGGCCACCGAGCCGATGGATATGCGCGCCGGCACCGAAACGGCATTGGCCCGGGTGATCGCGGTGTTCGGTGCGGCGAAGCCGCACTGCGCTTATCTGTTCGCCAATCGCCGGGCCAACCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAA > NC_002947/5036523‑5036764 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |