New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5544518 =	77 (0.830)	9 (0.100)	6/240	NT	10.1%	coding (391/426 nt)	rpsF	30S ribosomal protein S6
	?	NC_002947	5544547 =	86 (0.960)					coding (362/426 nt)	rpsF	30S ribosomal protein S6

GGTGTTGAGATCTTTGAAGTCGATCTCTTTCACGTCTTCAGCAGTGAAGCGGCAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAGGTTACGGATAACGGCA  >  NC_002947/5544371‑5544663                                                                                                                                                     |                                                                                                                                                  ccgagctggaagacaacttccgctacaacgatgccgttatccgtaacctggtcatccgtcgcgacgaagccgttaccggccagtccgagatgctgaaggctgaagagaaccgcagcgagcgccgtgagcgtcgcgagcgtcctgagcaTg                                                                                                                                                  <  2:1947991‑M1/2‑1 (MQ=255)  gtgtTGAGATCTTTGAAGTCGATCTCTTTCACGTCTTCAGCAGTGAAGCGGCAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCt                                                                                                                                                <  2:1551951/150‑1 (MQ=255)   gagctggaagacaacttccgctacaacgatgccgttatccgtaacctggtcatccgtcgcgacgaagccgttaccggccagtccgagatgctgaaggctgaagagaaccgcagcgagcgccgtgagcgtcgcgagcgtcctgagcaTGCt                                                                                                                                                >  1:1632895‑M1/147‑150 (MQ=255)        ggaagacaacttccgctacaacgatgccgttatccgtaacctggtcatccgtcgcgacgaagccgttaccggccagtccgagatgctgaaggctgaagagaaccgcagcgagcgccgtgagcgtcgcgagcgtcctgagcaTGCTgtcgt                                                                                                                                           <  2:2376122‑M1/9‑1 (MQ=255)                 aaGTCGATCTCTTTCACGTCTTCAGCAGTGAAGCGGCAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTcggc                                                                                                                                 <  1:835320/150‑1 (MQ=255)                 aaGTCGATCTCTTTCACGTCTTCAGCAGTGAAGCGGCAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTcggc                                                                                                                                 <  1:796063/150‑1 (MQ=255)                 aaGTCGATCGCTTTCACGTCTTCAGCAGTGAAGCGGCAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTcggc                                                                                                                                 <  2:872250/150‑1 (MQ=255)                  aGTCGATCTCTTTCACGTCTTCAGCAGTGAAGCGGCAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTGTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTcggcg                                                                                                                                >  1:396103/1‑150 (MQ=255)                  aGTCGATCTCTTTCACGTCTTCAGCAGTGAAGCGGCAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTcggcg                                                                                                                                <  2:2323258/150‑1 (MQ=255)                  aGTCGATCTCTTTCACGTCTTCAGCAGTGAAGCGGCAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTcggcg                                                                                                                                <  1:1549298/150‑1 (MQ=255)                    tCGATCTCTTTCACGTCTTCGGCAGTGAAGCGGCAGAATATACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGa                                                                                                                              <  2:1300757/150‑1 (MQ=255)                    tCGATCTCTTTCACGTCTTCAGCAGTGAAGCGGCAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCTTTGCTGTCGTCGCCTTCGGCGGa                                                                                                                              <  2:1196637/150‑1 (MQ=255)                      gATCTCTTTCACGTCTTCAGCAGTGAAGCGGCAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTAT‑GCTATTAGGCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGt                                                                                                                            >  1:1946447/1‑150 (MQ=255)                        tacaacgatgccgttatccgtaacctggtcatccgtcgcgacgaagccgttaccggccagtccgagatgctgaaggctgaagagaaccgcagcgagcgccgtgagcgtcgcgagcgtcctgagcaTGCTGACTCCGCCTTCGGCGGAGTc                                                                                                                           >  1:838964‑M1/126‑150 (MQ=255)                         acaacgatgccgttatccgtaacctggtcatccgtcgcgacgaagccgttaccggccagtccgagatgctgaaggctgaagagaaccgcagcgagcgccgtgagcgtcgcgagcgtcctgagcaTGCTGTCGTCGCCTTCGGCGGAGTCa                                                                                                                          >  2:799879‑M1/125‑150 (MQ=255)                           ctTTCACGTCTTCAGCAGTGAAGCGGCAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGATG‑GAGTCGCTGTCATTGCTGTCGTCGGCTTCGGCGGAGTCAGCa                                                                                                                       >  1:2374246/1‑150 (MQ=255)                           aacgatgccgttatccgtaacctggtcatccgtcgagacgaagccgttaccggccagtccgagatgctgaaggctgaagagaaccgcagcgagcgccgtgagcgtcgcgagcgtcctgagcaTGCTGTCGTCGCCTTCGGCGGAGTCAGc                                                                                                                        >  1:1947991‑M1/123‑150 (MQ=255)                            tttCACGTCTTCAGCAGTGAAGCGGCAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCAt                                                                                                                      >  1:1914506/1‑150 (MQ=255)                            tttCACGTCTTCAGCAGTGAAGCGGCAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCAt                                                                                                                      >  1:2134508/1‑150 (MQ=255)                             cgatgccgttatccgtaacctggtcatccgtcgcgacgaagccgttaccggccagtccgagatgctgaaggctgaagagaaccgcagcgagcgccgtgagcgtcgcgagcgtcctgagcaTGCTGTCGTCGCCTTCGGCGGAGTCAGCAt                                                                                                                      >  1:2376122‑M1/121‑150 (MQ=255)                                aCGTCTTCAGCAGTGAAGCGGCAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTc                                                                                                                  >  2:1582690/1‑150 (MQ=255)                                 cGTCTTCAGCAGTGAAGCGGCAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCa                                                                                                                 <  2:2134508/150‑1 (MQ=255)                                  gTCTTCAGCAGTGAAGCGGCAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAGAGATCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAg                                                                                                                <  1:147980/150‑1 (MQ=255)                                  gTCTTCAGCAGTGAAGCGGCAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTgt                                                                                                                                              >  1:1515005/1‑120 (MQ=255)                                  gTCTTCAGCAGTGAAGCGGCAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTgt                                                                                                                                              <  2:1515005/120‑1 (MQ=255)                                  gTCTTCAGCAGTGAAGCGGCAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAg                                                                                                                >  1:1366240/1‑150 (MQ=255)                                  gTCTTCAGCAGTGAAGCGGCAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCACCATTCTCAg                                                                                                                >  1:100772/1‑150 (MQ=255)                                  ccgttatccgtaacctggtcatccgtcgcgacgaagccgttaccggccagtccgagatgctgaaggctgaagagaaccgcagcgagcgccgtgagcgtcgcgagcgtcctgagcaTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCa                                                                                                                 >  2:2080141‑M1/116‑150 (MQ=255)                                      tCAGCAGTGAAGCGGCAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACg                                                                                                            >  2:987717/1‑150 (MQ=255)                                          cagTGAAGCGGCAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTcg                                                                                                        >  1:506904/1‑150 (MQ=255)                                                     cAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACg                                                                                             <  2:1788630/150‑1 (MQ=255)                                                     cAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACg                                                                                             <  2:1914506/150‑1 (MQ=255)                                                               gacgacgGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTg                                                                                   >  2:1468299/1‑150 (MQ=255)                                                               gacgacgGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTg                                                                                   >  1:1297174/1‑150 (MQ=255)                                                                  gacgGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCgg                                                                                >  2:1308570/1‑150 (MQ=255)                                                                   acgGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGATGCTCGCGACGCTCACGGCGCTCGCTGCGGt                                                                               <  2:1405856/150‑1 (MQ=255)                                                                    cgGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGgcgc                                                                                         <  2:352593/139‑1 (MQ=255)                                                                    cgGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGgcgc                                                                                         >  1:352593/1‑139 (MQ=255)                                                                    agccgttaccggccagtccgagatgctgaaggctgaagagaaccgcagcgagcgccgtgagcgtcgcgagcgtcctgagcaTGCt                                                                                                                                                <  2:386827‑M1/4‑1 (MQ=255)                                                                    agccgttaccggccagtccgagatgctgaaggctgaagagaaccgcagcgagcgccgtgagcgtcgcgagcgtcctgagcaTGCt                                                                                                                                                >  1:386827‑M1/82‑85 (MQ=255)                                                                     ggAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTtc                                                                             >  1:1977628/1‑150 (MQ=255)                                                                     ggAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGAAGCTCGCGACGCTCACGGCGCTCGCTGCGGTtc                                                                             >  1:2088550/1‑150 (MQ=255)                                                                      gaagaaACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTtct                                                                            >  2:1750656/1‑150 (MQ=255)                                                                      gaagaaACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTtct                                                                            >  1:453082/1‑150 (MQ=255)                                                                        gttaccggccagtccgagatgctgaaggctgaagagaaccgcagcgagcgccgtgagcgtcgcgagcgtcctgagcaTGCTGTCGTCGCCTTCGGCGGAGTCa                                                                                                                          >  1:2082541‑M1/78‑103 (MQ=255)                                                                        gttaccggccagtccgagatgctgaaggctgaagagaaccgcagcgagcgccgtgagcgtcgcgagcgtcctgagcaTGCTGTCGTCGCCTTCGGCGGAGTCa                                                                                                                          <  2:2082541‑M1/26‑1 (MQ=255)                                                                                 ccATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTcttcagccttc                                                                 >  1:2333270/1‑150 (MQ=255)                                                                                    tttAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGATGGCAGTGCATCAAGAGTCCATTTCATGTTCGGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTcttcagccttcagc                                                              >  1:168658/1‑150 (MQ=255)                                                                                    attAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGTTTCTcttcagccttcagc                                                              >  1:2180551/2‑150 (MQ=255)                                                                                      tAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCAt                                                            >  1:240351/1‑150 (MQ=255)                                                                                       aaTAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGGCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCAtc                                                           >  1:1735427/1‑150 (MQ=255)                                                                                              tcctcTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCa                                                                                                                 >  1:130134/1‑89 (MQ=255)                                                                                              tcctcTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCa                                                                                                                 <  2:130134/89‑1 (MQ=255)                                                                                                 tctAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGc                                                 >  1:1011467/1‑150 (MQ=255)                                                                                                  ctAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGcc                                                >  1:1631075/1‑150 (MQ=255)                                                                                                   tAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCgg                                                                                >  1:772212/1‑117 (MQ=255)                                                                                                   tAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCgg                                                                                <  2:772212/117‑1 (MQ=255)                                                                                                   tAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCg                                               <  2:1977628/150‑1 (MQ=255)                                                                                                    aaaGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCgg                                              <  1:1155583/150‑1 (MQ=255)                                                                                                           cGTGGATTACTCGTCAGCGTTATGGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGAATGCTCAGGACGGTCGCGACGCTCACGGCGCTCGATGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGc                                       >  1:686660/1‑150 (MQ=255)                                                                                                           cGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGc                                       <  1:1582690/150‑1 (MQ=255)                                                                                                            gTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGa                                                      <  1:1178954/134‑1 (MQ=255)                                                                                                            gTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGa                                                      >  2:1178954/1‑134 (MQ=255)                                                                                                              ggATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGTGGAGTCAGCATGCTCAGGCCGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTtc                                    <  1:292607/150‑1 (MQ=255)                                                                                                              ccgcagcgagcgccgtgagcgtcgcgagcgtcctgagcaTGCTGTCGTCGCCTTCGGCGGAGTCa                                                                                                                          <  1:416142‑M1/26‑1 (MQ=255)                                                                                                              ccgcagcgagcgccgtgagcgtcgcgagcgtcctgagcaTGCTGTCGTCGCCTTCGGCGGAGTCa                                                                                                                          >  2:416142‑M1/40‑65 (MQ=255)                                                                                                                 ttACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGc                                       >  1:1894677/1‑144 (MQ=255)                                                                                                                 ttACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGc                                       <  2:1894677/144‑1 (MQ=255)                                                                                                                    cTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTcgcg                              >  1:338921/1‑150 (MQ=255)                                                                                                                     tCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGa                             >  1:2209952/1‑150 (MQ=255)                                                                                                                       gTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCCGCAAGCATCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACg                           >  1:1841967/1‑150 (MQ=255)                                                                                                                        tCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACgg                          >  2:1487893/1‑150 (MQ=255)                                                                                                                          aGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGAt                        <  2:1366240/150‑1 (MQ=255)                                                                                                                            cGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGa                      <  1:1308570/150‑1 (MQ=255)                                                                                                                             gTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGAc                     >  1:184200/1‑150 (MQ=255)                                                                                                                                aTCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAg                  <  2:396103/150‑1 (MQ=255)                                                                                                                                 tCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCg                                               <  1:1820315/120‑1 (MQ=255)                                                                                                                                 tCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCg                                               >  2:1820315/1‑120 (MQ=255)                                                                                                                                     tG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAGGTTAc             <  2:26946/150‑1 (MQ=255)                                                                                                                                     tG‑GAGTCGCTGTCATTGCTGGCGTCGCCTTCGGCGGAGTCAGCATGCGCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAGGTTAc             <  1:1070702/150‑1 (MQ=255)                                                                                                                                      g‑gAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGTCGCTCGCTGCGCTGGCTGCGGTTCTCTTCAGCCTTCCGCCTCTCGGCCTGGCCGGCAACGGCTTCGTCGCGACGGATGACCAGGTTACg            <  1:1750656/150‑1 (MQ=255)                                                                                                                                      g‑gAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAGGTTACg            <  1:1468299/150‑1 (MQ=255)                                                                                                                                        gAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAGGTTACgg           >  1:454693/1‑150 (MQ=255)                                                                                                                                           tCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAGGTTACGGATa        >  1:1365616/1‑150 (MQ=255)                                                                                                                                           tCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCAAAAGAAGCTCACGGCGATAGTGGTAGTTCGCTGCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAGGTTACGGATa        >  1:2123098/1‑150 (MQ=255)                                                                                                                                             gCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCg                                               <  2:2358695/109‑1 (MQ=255)                                                                                                                                             gCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCg                                               >  1:2358695/1‑109 (MQ=255)                                                                                                                                             gCTGTCATCGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAGGTTACGGATAAc      >  1:794643/1‑150 (MQ=255)                                                                                                                                              cTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAg                  <  2:2243987/137‑1 (MQ=255)                                                                                                                                              cTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAg                  >  1:2243987/1‑137 (MQ=255)                                                                                                                                               tGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTcttcagccttcag                                                               >  2:1836828/1‑91 (MQ=255)                                                                                                                                               tGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTcttcagccttcag                                                               <  1:1836828/91‑1 (MQ=255)                                                                                                                                                 tCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAGGTTACGGATAACGGCa  >  2:293252/1‑150 (MQ=255)                                                                                                                                                   aTTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAGGTTACg            <  2:536647/138‑1 (MQ=255)                                                                                                                                                   aTTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAGGTTACg            >  1:536647/1‑138 (MQ=255)                                                                                                                                                     |                                                                                                                                                  GGTGTTGAGATCTTTGAAGTCGATCTCTTTCACGTCTTCAGCAGTGAAGCGGCAGAATTTACGACGACGGAAGAAACGTGCCATTTAATAGGCTCCTCTAAAGGTCCGTGGATTACTCGTCAGCGTTATCGCTG‑GAGTCGCTGTCATTGCTGTCGTCGCCTTCGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAGGTTACGGATAACGGCA  >  NC_002947/5544371‑5544663

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.