New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5557811 =97 (1.040)7 (0.090) 6/204 NT 9.0% intergenic (‑131/+200) PP_4888/purA methyl‑accepting chemotaxis transducer/adenylosuccinate synthetase
?NC_002947 5557893 = 63 (0.830)intergenic (‑213/+118) PP_4888/purA methyl‑accepting chemotaxis transducer/adenylosuccinate synthetase

Only 100 of 127 total aligned reads displayed.

TGAGAGGATGGCAGACACGGTGTAACCCTCGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAA  >  NC_002947/5557663‑5557960
                                                                                                                                                    |                                                                                                                                                     
 ccatcgtgctgcgtcacccgttcgcctgatctgccttccaggctgatctgacgccgcggccctgagaagggccgcggcgttttcatttgtgggcatgtctgtgctggccaatatccaccggtaatccaccgttgccgccgctaccgtAtt                                                                                                                                                     >  2:1577277‑M1/148‑150 (MQ=255)
   gagGATGGCAGACACGGTGTAACCCTCGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTcg                                                                                                                                                   >  2:1397663/1‑150 (MQ=255)
    tcgtgctgcgtcacccgttcgcctgatctgccttccaggctgatctgacgccgcggccctgagaagggccgcggcgttttcatttgtgggcatgtctgtgctggccaatatccaccggtaatccaccgttgccgccgctaccgtATTcgc                                                                                                                                                  >  1:1537536‑M1/145‑150 (MQ=255)
      gATGGCAGACACGGTGTAACCCTCGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCgg                                                                                                                                                <  1:1584254/150‑1 (MQ=255)
      gATGGCAGACACGGTGTAACCCTCGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCgg                                                                                                                                                <  2:1123192/150‑1 (MQ=255)
            aGACACGGTGTAACCCTCGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAAc                                                                                                                                          >  1:1681375/1‑150 (MQ=255)
                acccgttcgcctgatctgccttccaggctgatctgacgccgcggccctgagaagggccgcggcgttttcatttgtgggcatgtctgtgctggccaatatccaccggtaatccaccgttgccgccgctaccgtATTCGCGGGTAAACCCGc                                                                                                                                      <  2:1546464‑M1/18‑1 (MQ=255)
                acGGTGTAACCCTCGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGc                                                                                                                                      >  1:809365/1‑150 (MQ=255)
                acGGTGTAACCCTCGTGTTTTCTGGCGCCACTATTTTGACGGCATATAGGTAATGTGCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGc                                                                                                                                      <  1:2379657/150‑1 (MQ=255)
                 cccgttcgcctgatctgccttccaggctgatctgacgccgcggccctgagaagggccgcggcgttttcatttgtgggcatgtctgtgctggccaatatccaccggtaatccaccgttgccgccgctaccgtATTCGCGGGTAAACCNGCt                                                                                                                                     >  2:1518528‑M1/132‑150 (MQ=255)
                 cccgttcgcctgatctgccttccaggctgatctgacgccgcggccctgagaagggccgcggcgttttcatttgtgggcatgtctgtgctggccaatatccaccggtaatccaccgttgccgccgctaccgtATTCGCGGGTAAACCNGCt                                                                                                                                     >  2:1517764‑M1/132‑150 (MQ=255)
                 cccgttcgcctgatctgccttccaggctgatctgacgccgcggccctgagaagggccgcggcgttttcatttgtctgcatgtctgtgctggccaatatccaccggtaatccaccgttgccgccgctaccgtATTCGCGGGTAAACCCGCt                                                                                                                                     >  1:156254‑M1/132‑150 (MQ=255)
                  ggTGTAACCCTCGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTc                                                                                                                                    <  1:1917372/150‑1 (MQ=255)
                  ccgttcgcctgatctgccttccaggctgatctgacgccgcggccctgagaagggccgcggcgttttcatttgtgggcatgtctgtgctggccaatatccaccggtaatccaccgttgccgccgctaccgtATTcgc                                                                                                                                                  >  1:1397051‑M1/131‑136 (MQ=255)
                  ccgttcgcctgatctgccttccaggctgatctgacgccgcggccctgagaagggccgcggcgttttcatttgtgggcatgtctgtgctggccaatatccaccggtaatccaccgttgccgccgctaccgtATTcgc                                                                                                                                                  <  2:1397051‑M1/6‑1 (MQ=255)
                  ccgttcgcctgatctgccttccagactgatctgacgccgcggccctgagaagggccgcggcgttttcatttgtgggcatgtctgtgctggccaaaaagaaatgggaatccaccgttgccgccgctaccgtATTCGCGGGTAAACCcgcgc                                                                                                                                    <  1:146715‑M1/20‑3 (MQ=255)
                    tgtAACCCTCGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCt                                                                                                                                  >  1:922953/1‑150 (MQ=255)
                     ttcgcctgatctgccttccaggctgatctgacgccgcggccctgagaagggccgcggcgttttcatttgtgggcatgtctgtgctggccaatatccaccggtaatccaccgttgccgccgctaccgtATTCGCGGGTAAACCCGCTCCTa                                                                                                                                 >  2:1954386‑M1/128‑150 (MQ=255)
                        aCCCTCGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCCATGGGGTTCGGTGTGGTGGACGAAGCCCGCGTAAACCCGCTCCTACaa                                                                                                                              >  2:1453757/1‑150 (MQ=255)
                        aCCCTCGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGGGCAGGCCCATTCGAGGGTAAACCCGCTCATACaa                                                                                                                              >  2:265824/1‑150 (MQ=255)
                         cccTCGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAAc                                                                                                                             >  2:70454/1‑150 (MQ=255)
                          ccTCGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACg                                                                                                                            >  2:1249134/1‑150 (MQ=255)
                              gtgtTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCt                                                                                                                        >  2:652044/1‑150 (MQ=255)
                                 ttttCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTgcg                                                                                                                     >  2:2169098/1‑150 (MQ=255)
                                   ttCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGcc                                                                                                                   >  1:276479/1‑150 (MQ=255)
                                       ggCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAAc                                                                                                               >  1:258446/1‑150 (MQ=255)
                                           ccACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCgg                                                                                                                                                >  1:208002/1‑113 (MQ=255)
                                           ccACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATc                                                                                                           >  1:2347831/1‑150 (MQ=255)
                                            tgatctgacgccgcggccctgagaagggccgcggcgttttcatttgtgggcatgtctgtgctggccaatatccaccggtaatccaccgttgccgccgctaccgtATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCg                                                                                                          >  1:2380801‑M1/105‑150 (MQ=255)
                                            cACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCg                                                                                                          >  2:1143049/1‑150 (MQ=255)
                                              cTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGtt                                                                                                        <  2:2348224/150‑1 (MQ=255)
                                                aTTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTtgt                                                                                                      <  1:1143049/150‑1 (MQ=255)
                                                  tttGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTtgtgt                                                                                                    <  2:2034234/150‑1 (MQ=255)
                                                       tGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCca                                                                                               >  2:40285/1‑150 (MQ=255)
                                                       tGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCCCCTACAACGGCCTGCGCCCAACCACCGTTGTGTGcccc                                                                                               >  2:144775/1‑149 (MQ=255)
                                                         gCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGCGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCcaca                                                                                             >  2:1306268/1‑150 (MQ=255)
                                                          cgtCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCAGCGTTGTGTGCCCACAt                                                                                            >  2:1215061/3‑150 (MQ=255)
                                                          cATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACAt                                                                                            <  2:809365/150‑1 (MQ=255)
                                                           aTCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATa                                                                                           <  2:1713226/150‑1 (MQ=255)
                                                               aCAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAg                                                                                       >  2:1741951/1‑150 (MQ=255)
                                                                cAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGc                                                                                      <  1:2117168/150‑1 (MQ=255)
                                                                  gaagggccgcggcgttttcatttgtgggcatgtctgtgctggccaatatccaccggtaatccaccgttgccgccgctaccgtATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCgg                                                                                    >  1:965146‑M1/83‑150 (MQ=255)
                                                                  gAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCgg                                                                                    <  1:652044/150‑1 (MQ=255)
                                                                  gAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCgg                                                                                    >  1:1820856/1‑150 (MQ=255)
                                                                   aaaCTTGTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGGCTAGCAATGGGGCTTCGTGGGCAGGCCCATTCGCGGGTGAGCCCGGTCCTACGACGGGCTGCGCCCAACCATCGTTGTGGGCGCACATAGGAGCggg                                                                                   >  2:235499/1‑150 (MQ=255)
                                                                   aaaCTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAAc                                                                                                                                          >  2:1202354/1‑95 (MQ=255)
                                                                   aaaCTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAAc                                                                                                                                          <  1:1202354/95‑1 (MQ=255)
                                                                   aaaCTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCggg                                                                                   <  1:2169098/150‑1 (MQ=255)
                                                                    aaCTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGt                                                                                  <  2:1163285/150‑1 (MQ=255)
                                                                      ggccgcggcgttttcatttgtgggcatgtctgtgctggccaatatccaccggtaatccaccgttgccgccgctaccgtATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGttt                                                                                >  2:905305‑M1/79‑150 (MQ=255)
                                                                       ttcttACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACTGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCgg                                                                                    >  2:660757/1‑145 (MQ=255)
                                                                       ttcttACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACTGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCgg                                                                                    <  1:660757/145‑1 (MQ=255)
                                                                          ttACCGCAAGGGTTGTGTCGCAGGGAGCGGGGATATGAGCATAGGTTTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAATCCCGCTCCTACAACGGCCTGCGCCTAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTAccc                                                                            <  2:297012/150‑1 (MQ=255)
                                                                            ggcgttttcatttgtgggcatgtctgtgctggccaatatccaccggtaatccaccgttgccgccgctaccgtATTCGCGGGTAAAc                                                                                                                                          >  1:284305‑M1/73‑86 (MQ=255)
                                                                            aCAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCcgc                                                                          <  1:1215061/150‑1 (MQ=255)
                                                                                cAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAAt                                                                      >  2:1895155/1‑150 (MQ=255)
                                                                                cAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAAt                                                                      >  2:1428844/1‑150 (MQ=255)
                                                                                cAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAAt                                                                      >  2:343670/1‑150 (MQ=255)
                                                                                    ggTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCaa                                                                                                                <  1:2248446/104‑1 (MQ=255)
                                                                                      ttGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTa                                                                <  1:1397663/150‑1 (MQ=255)
                                                                                      ttGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTa                                                                <  1:343670/150‑1 (MQ=255)
                                                                                            cGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAgcggcg                                                          <  1:1895155/150‑1 (MQ=255)
                                                                                             gcaggcagCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATc                                                                                                           <  1:1175397/100‑1 (MQ=255)
                                                                                             gcaggcagCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCcaca                                                                                             <  2:897264/114‑1 (MQ=255)
                                                                                             gcaggcagCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCcaca                                                                                             >  1:897264/1‑114 (MQ=255)
                                                                                                 gcagCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAAc                                                     >  2:2386383/1‑150 (MQ=255)
                                                                                                   agCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACg                                                                                                                            <  1:979783/77‑1 (MQ=255)
                                                                                                    gCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAACCCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGt                                                  <  2:1466106/150‑1 (MQ=255)
                                                                                                    gCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGt                                                  <  1:1428844/150‑1 (MQ=255)
                                                                                                       gggAAATGCGCCAAGGTCTAGCAATGGGTTTTCGTGTGCAGGCCCATTCGCGCGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGCGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGa                                               <  1:265824/150‑1 (MQ=255)
                                                                                                       gggAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGa                                               <  1:1059942/150‑1 (MQ=255)
                                                                                                       gggAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGa                                               <  2:2338998/150‑1 (MQ=255)
                                                                                                       gggAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATGCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGa                                               <  1:1453757/150‑1 (MQ=255)
                                                                                                              gcgcCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCgg                                        >  1:2201078/1‑150 (MQ=255)
                                                                                                                gcCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTg                                      <  1:2227335/150‑1 (MQ=255)
                                                                                                                   aaGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATACGGGGGGCGGTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGat                                   >  2:63292/1‑150 (MQ=39)
                                                                                                                      gTCTAGCAATGGGGTTTCGTGTGCAGGCCCCTTCGCGGGTGCTTCTTGCGCTTCATCGGCCGTCTTCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGGATTACCGGTGGATAtt                                <  1:1741951/150‑1 (MQ=21)
                                                                                                                      gTCTAGAAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATAtt                                <  2:1358846/150‑1 (MQ=255)
                                                                                                                       tCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTg                               <  2:2429578/150‑1 (MQ=255)
                                                                                                                        cTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTgg                              <  2:2201078/150‑1 (MQ=255)
                                                                                                                         tAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGc                             >  1:1219063/1‑150 (MQ=255)
                                                                                                                           gCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCa                           <  1:70454/150‑1 (MQ=255)
                                                                                                                           gCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCa                           <  1:1318567/150‑1 (MQ=255)
                                                                                                                             aaTGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAgcggc                                                           <  1:393656/116‑1 (MQ=255)
                                                                                                                             aaTGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAgcggc                                                           >  2:393656/1‑116 (MQ=255)
                                                                                                                             aaTGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGt                                       >  2:1143901/1‑136 (MQ=255)
                                                                                                                             aaTGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGt                                       <  1:1143901/136‑1 (MQ=255)
                                                                                                                                ggggTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTTGATTACCGGTGGATATTGGCCAGcaca                      <  1:63292/150‑1 (MQ=255)
                                                                                                                                ggggTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGcaca                      <  2:1681375/150‑1 (MQ=255)
                                                                                                                                   gTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGAc                   <  1:1094683/150‑1 (MQ=255)
                                                                                                                                       ccgccgctaccgtATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCgg                                                                                    <  2:2264715‑M1/68‑1 (MQ=255)
                                                                                                                                       ccgccgctaccgtATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCAACGTTTTGTGCCCACATAGGAGCgg                                                                                    >  1:2264715‑M1/14‑81 (MQ=255)
                                                                                                                                        gtgtGCAGGCCCATTCGCGGATAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGcc              >  1:54322/1‑150 (MQ=255)
                                                                                                                                            gCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGt                                       <  1:2242791/121‑1 (MQ=255)
                                                                                                                                            gCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGt                                       >  2:2242791/1‑121 (MQ=255)
                                                                                                                                              aGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACCGCCATGCCGACaaa        >  2:169247/1‑150 (MQ=255)
                                                                                                                                                  ccATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGt                                                  <  1:727056/104‑1 (MQ=255)
                                                                                                                                                   cATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGACTACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGc               >  1:406055/1‑138 (MQ=255)
                                                                                                                                                    ATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTg                               <  2:2107805‑M1/121‑1 (MQ=255)
                                                                                                                                                    ATTCGCGGGTAAACCCGCTCCCACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCCGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAatgacaa  >  1:235499‑M1/1‑147 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
TGAGAGGATGGCAGACACGGTGTAACCCTCGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAA  >  NC_002947/5557663‑5557960

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.