New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5827883 =90 (0.960)10 (0.120) 9/228 NT 10.5% intergenic (+29/+170) mtgA/rpoH monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32
?NC_002947 5827967 = 89 (1.050)intergenic (+113/+86) mtgA/rpoH monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32

Only 100 of 123 total aligned reads displayed.

TGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTT  >  NC_002947/5827735‑5828031
                                                                                                                                                     |                                                                                                                                                    
tGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAAcc                                                                                                                                                     >  1:2428302/1‑150 (MQ=255)
tGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTACTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAAcc                                                                                                                                                     >  2:858635/1‑150 (MQ=255)
 atcttattcgccagttggagaagaatgcgatgaacaaggtcaaggcactgatcgctgcctgattgagtctgggttgtccagaaaagccgctggccctgttaactcagccgcttttttgtttggctttgccggcctcttcgcgggtaagcc                                                                                                                                                     >  1:2253998‑M1/149‑150 (MQ=255)
   cgtattcgccagttggagaagaatgcgatgaacaaggtcaaggcactgatcgctgcctgattgagtctgggttgtaaagaaaagccgctggccctatggggtgagcggcttttttgtttggctttgccggcctcttcgcgggtaagCCCg                                                                                                                                                   <  1:1800728‑M1/4‑1 (MQ=255)
     tattcgccagttggagaagaatgcgatgaacaaggtcaaggcactgatcgctgcctgattgagtctgggttgtaaagaaaagccgctggccctatggggtgagcggcttttttgtttggctttgccggcctcttcgcgggtaagCCCGCt                                                                                                                                                 <  2:870650‑M1/6‑1 (MQ=255)
      attcgccagttggagaagaatgcgatgaacaaggtcaaggcactgatcgctgcctgattgagtctgggttgtaaagaaaagccgctggccctatggggtgagcggcttttttgtttggctttgccggcctcttcgcgggtaagcccagat                                                                                                                                                <  2:2253998‑M1/7‑5 (MQ=255)
       ttcgccagttggagaagaatgcgatgaacaaggtcaaggcactgatcgctgcctgattgagtctgggttgtaaagaaaagccgctggccctatggggtgagcggcttttttgtttggctttgccggcctcttcgcgggtaagCCCGCTcc                                                                                                                                               >  2:44806‑M1/143‑150 (MQ=255)
       ttcgccagttggagaagaatgcgatgaacaaggtcaaggcactgatcgctgcctgattgagtctgggttgtaaagaaaagccgctggccctatggggtgagaggcttttttgtttggctttgccggcctcttcgcgggtaagCCCGCTcc                                                                                                                                               <  1:259789‑M1/8‑1 (MQ=255)
        cAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTa                                                                                                                                             >  2:2190319/1‑150 (MQ=255)
          gccagttggagaagaatgcgatgaacaaggtcaaggcactgatcgctgcctgattgagtctgggttgtaaagaaaagccgctggccctatggggtgagcggcttttttgtttggctttgccggcctcttcgcgggtaagCCCGCTCCTAc                                                                                                                                            <  2:1857601‑M1/11‑1 (MQ=255)
          gccagttggagaagaatgcgatgaacaaggtcaaggcactgatcgctgcctgattgagtctgggttgtaaagaaaagccgctggccctatggggtgagcggcttttttgtttggctttgccggcctcttcgcgggtaagCCCGCTCCTAc                                                                                                                                            <  1:336534‑M1/11‑1 (MQ=255)
          gccagttggagaagaatgcgatgaacaaggtcaaggcactgatcgctgcctgattgagtctgggttgtaaagaaaagccgctggccctatggggtgagcggcttttttgtttggctttgccggcctcttcgcgggtaagCCCGCTCCTAc                                                                                                                                            <  2:575266‑M1/11‑1 (MQ=255)
          gCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACg                                                                                                                                           >  2:2126137/1‑150 (MQ=255)
           ccgaccgaGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTNCgg                                                                                                                                          <  2:1514701/150‑1 (MQ=255)
                   gTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCTTTT‑CGCGGGGAAACCCGCTCCTACGGGCAACCGc                                                                                                                                  >  1:970969/1‑150 (MQ=255)
                   gTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGc                                                                                                                                  <  2:1527775/150‑1 (MQ=255)
                   agaagaatgcgatgaacaaggtcaaggcactgatcgctgcctgattgagtctgggttgtaaagaaaagccgctggccctatggggtgagcggcttttttgtttggctttgccggccctttcgcgggtaaaCCCGCTCCTACGGGCAACCg                                                                                                                                   <  2:1561863‑M1/20‑1 (MQ=255)
                      ccTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATc                                                                                                                               >  1:528937/1‑150 (MQ=255)
                      catACGTGGCAAGCCAGGCCGGAAGAAATCTCCGGCATATGAGCCAGCTGGGCGGTCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTCGAATGCAGTCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATc                                                                                                                               >  2:1729099/3‑150 (MQ=37)
                        tACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGAAAAACAGCGTGTACGGGCAACCGCATccc                                                                                                                             >  2:553852/1‑150 (MQ=255)
                            aatccAGCCGGCCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGc                                                                                                                         >  2:1363879/4‑150 (MQ=255)
                                cAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGcctcc                                                                                                                     >  1:1856201/1‑150 (MQ=255)
                                 aacaaggtcaaggcactgatcgctgcctgattgagtctgggttgtaaagaaaagccgctggccctatggggtgagcggcttttttgtttggctttgccggcctcttcgcgggtaagCCCGCTCCTACAGGCAaccgcatcccctgtagga                                                                                                                     >  1:1857601‑M1/117‑143 (MQ=255)
                                      ggccggCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCgg                                                                                                               <  2:528937/150‑1 (MQ=255)
                                      ggccggCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCgg                                                                                                               <  1:2190319/150‑1 (MQ=255)
                                      ggccggCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCgg                                                                                                               <  2:2256459/150‑1 (MQ=255)
                                       gtcaaggcactgatcgctgcctgattgagtctgggttgtaaagaaaagccgctggccctatggggtgagcggcttttttgtttggctttgccggcctcttcgcgggtaagCCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCgg                                                                                                               <  2:1668906‑M1/40‑1 (MQ=255)
                                       gccggCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCggg                                                                                                              <  1:2404198/150‑1 (MQ=255)
                                             tGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAAcc                                                                                                        <  1:1610163/150‑1 (MQ=255)
                                                   atcgctgcctgattgagtctgggttgtaaagaaaagccgctggccctatggggtgagcggcttttttgtttggctttgccggcctcttcgcgggtaagCCCGCTc                                                                                                                                                <  1:1934933‑M1/7‑1 (MQ=255)
                                                   atcgctgcctgattgagtctgggttgtaaagaaaagccgctggccctatggggtgagcggcttttttgtttggctttgccggcctcttcgcgggtaagCCCGCTc                                                                                                                                                >  2:1934933‑M1/99‑105 (MQ=255)
                                                    gCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATcccc                                                                                                                            >  2:230677/1‑123 (MQ=255)
                                                    gCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATcccc                                                                                                                            <  1:230677/123‑1 (MQ=255)
                                                       ggCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACa                                                                                              >  1:979844/1‑150 (MQ=255)
                                                        gCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAg                                                                                             <  2:1418241/150‑1 (MQ=255)
                                                        gCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAg                                                                                             <  2:1290281/150‑1 (MQ=255)
                                                        gCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAg                                                                                             <  2:114562/150‑1 (MQ=255)
                                                        gCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCAGGGCCGTTT‑CGCGGGTAAACCCGCTTCTACGGGCAACCGTATCCCCGGCCGCCTCGCGGGCAAACCCGCGCGTACAg                                                                                             >  1:852036/1‑150 (MQ=255)
                                                               aggtaGCTGGGCCCGCCCAGCTGCCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAAccc                                                                                      >  2:377296/5‑149 (MQ=39)
                                                               aGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACgg                                                                                                                                          <  2:2164049/98‑1 (MQ=255)
                                                                  cAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCAt                                                                                   >  2:932689/1‑150 (MQ=255)
                                                                   aGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATc                                                                                  <  2:1802788/150‑1 (MQ=255)
                                                                   aGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATc                                                                                  >  1:1885886/1‑150 (MQ=255)
                                                                    gCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATcc                                                                                 >  2:1521917/1‑150 (MQ=255)
                                                                     cTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGACTG‑AGCAAAGAAAGGTTGTGCTTGTAACAGCGCTCCTACGGGCAACCGCCTCCACGCCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATccc                                                                                <  1:2388002/150‑1 (MQ=255)
                                                                     cTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATccc                                                                                <  2:803938/150‑1 (MQ=255)
                                                                         gcgggcCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGt                                                                            >  2:1108129/1‑150 (MQ=255)
                                                                               ccAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCg                                                                                                                           >  1:1350293/1‑97 (MQ=255)
                                                                                   cTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGc                                                                  >  2:598893/1‑150 (MQ=255)
                                                                                   aaagccgctggccctatggggtgagcggcttttttgtttggctttgccggccctttcgcgggtaaaCCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCggg                                                                   >  1:1561863‑M1/67‑150 (MQ=255)
                                                                                    aagccgctggccctatggggtgagcggcttttttgtttggctttgccggcctcttcgcgggtaaaCCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGc                                                                  <  1:2236579‑M1/85‑1 (MQ=255)
                                                                                       cTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTAc                                                              >  2:2046389/1‑150 (MQ=255)
                                                                                        cgctggccctatggggtgagcggcttttttgtttggctttgccggcctcttcgcgggtaaaCCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTAc                                                              >  2:2236579‑M1/62‑150 (MQ=255)
                                                                                         gATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGc                                                                                                                                                  >  2:1031230/1‑64 (MQ=255)
                                                                                         gATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGc                                                                                                                                                  <  1:1031230/64‑1 (MQ=255)
                                                                                          ctggccctatggggtgagcggcttttttgtttggctttgccggcctcttcgcgggtaagCCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTAccc                                                            >  2:1418646‑M1/60‑150 (MQ=255)
                                                                                          aTGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCcg                                                           >  2:1208428/1‑150 (MQ=255)
                                                                                               cctatggggtgagcggcttttttgtttggctttgccggcctcttcgcgggtaagCCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGaa                                                       >  1:1668906‑M1/55‑150 (MQ=255)
                                                                                                ctatggggtgagcggcttttttgtttggctttgccggcctcttcgcgggtaagCCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAgg                                                                         <  1:1173915‑M1/78‑1 (MQ=255)
                                                                                                ctatggggtgagcggcttttttgtttggctttgccggcctcttcgcgggtaagCCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAgg                                                                         >  2:1173915‑M1/54‑131 (MQ=255)
                                                                                                cTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAAc                                                                                                         <  2:1926187/98‑1 (MQ=255)
                                                                                                cTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAAc                                                                                                         >  1:1926187/1‑98 (MQ=255)
                                                                                                 tgcaCTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCTAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAagag                                                    <  2:852036/147‑1 (MQ=255)
                                                                                                   gACTCCTCCAGAAAGCTTTGAGTGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGc                                                                                                                                                  <  2:1345959/54‑1 (MQ=255)
                                                                                                   gACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGc                                                                                                                                                  >  1:1345959/1‑54 (MQ=255)
                                                                                                   gACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGc                                                  <  2:2129361/150‑1 (MQ=255)
                                                                                                   gACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGc                                                  <  1:2046389/150‑1 (MQ=255)
                                                                                                      tcctccAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCgg                                               >  2:1063515/1‑150 (MQ=255)
                                                                                                        ctccAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTa                                                               <  2:1202333/132‑1 (MQ=255)
                                                                                                        ctccAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCa                                             >  1:216617/1‑150 (MQ=255)
                                                                                                         tccAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCaa                                                                                         >  2:1746468/1‑105 (MQ=255)
                                                                                                         tccAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCaa                                                                                         <  1:1746468/105‑1 (MQ=255)
                                                                                                         tccAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCaa                                            >  1:1926603/1‑150 (MQ=255)
                                                                                                           cAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCgg                                                                                                               >  1:621302/1‑81 (MQ=255)
                                                                                                           cAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCgg                                                                                                               <  2:622001/81‑1 (MQ=255)
                                                                                                           cAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCgg                                                                                                               >  1:622001/1‑81 (MQ=255)
                                                                                                             gAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGc                                                                      <  2:876934/120‑1 (MQ=255)
                                                                                                             gAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGc                                                                      >  1:876934/1‑120 (MQ=255)
                                                                                                              aaaGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCca                                       >  1:401775/1‑150 (MQ=255)
                                                                                                                aGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCcaaa                                     <  1:1521917/150‑1 (MQ=255)
                                                                                                                aGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCCAAGAGGCCGGCAAAGCcaaa                                     <  1:1208428/150‑1 (MQ=255)
                                                                                                                 gCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCcaaac                                    >  2:900418/1‑150 (MQ=255)
                                                                                                                   tttGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCcaaacaa                                  >  1:1337970/1‑150 (MQ=255)
                                                                                                                       aaTGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCTCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGaa                                                       <  1:1023390/125‑1 (MQ=255)
                                                                                                                       aaTGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACaaaaaa                              <  1:932689/150‑1 (MQ=255)
                                                                                                                       aaTGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACaaaaaa                              <  1:1508575/150‑1 (MQ=255)
                                                                                                                          gCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGcc                           <  2:1926603/150‑1 (MQ=255)
                                                                                                                               cccggcccTTT‑CGCGGGTAACCCCGCTCCTACGGGCAACCGCATCCCCCGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCa                      <  1:1729099/150‑1 (MQ=255)
                                                                                                                                ccggcccTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCAc                     >  2:544055/1‑150 (MQ=255)
                                                                                                                                ccggcccTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCAc                     >  1:210416/1‑150 (MQ=255)
                                                                                                                                  ggcccTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCAccc                   <  2:210416/150‑1 (MQ=255)
                                                                                                                                      cTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCt                        >  1:1855750/1‑141 (MQ=255)
                                                                                                                                      cTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCt                        <  2:1855750/141‑1 (MQ=255)
                                                                                                                                       ttt‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAg              >  2:31902/1‑150 (MQ=255)
                                                                                                                                       ttt‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAg              >  1:575266/1‑150 (MQ=255)
                                                                                                                                             cgGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGAGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCa         <  1:377296/150‑1 (MQ=255)
                                                                                                                                                gTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCg      >  1:1709902/1‑150 (MQ=255)
                                                                                                                                                 tAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCgg     >  1:1179251/1‑150 (MQ=255)
                                                                                                                                                 tAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCgg     <  1:1063515/150‑1 (MQ=255)
                                                                                                                                                    aCCNGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAGAGAAGCCTCGCACCCCATAGGGCCAGCGGCtt  >  2:1495748/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
TGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTT‑CGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTT  >  NC_002947/5827735‑5828031

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.