New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 161687	75 (0.800)	6 (0.070)	7/236	NT	7.5%	intergenic (‑182/+64)	PP_0152/PP_0153	hypothetical protein/hypothetical protein
	?	NC_002947	= 161703	77 (0.870)					intergenic (‑198/+48)	PP_0152/PP_0153	hypothetical protein/hypothetical protein

CAGTGCTGCGTAGAGATGACAACGACTGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTGACGACGGC  >  NC_002947/161558‑161851                                                                                                                                                     |                                                                                                                                                     cAGTGCTGCGTAGAGATGACAACGACTGCTGTGCCAGACAACTGTTAAGGTGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAAcggg                                                                                                                                                  >  1:1729371‑M2/1‑146 (MQ=255)    tgctggGTAGAGATGCCAACGACTGCTGTGCCAGCCACCTGTTTAGGTGTGTTTTATTTGTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAAcgggttt                                                                                                                                               >  2:2230484‑M2/1‑143 (MQ=255)     gctgcGTAGAGATGACAACGACTGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGTTGCAG‑GTGACTGCAGcgggtttt                                                                                                                                              >  1:2340749‑M2/1‑142 (MQ=255)      ctgcGTAGAGATGACAACGACTGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCCACCCACACCAGCGT‑ACTCGGGCAATAATAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTga                                                                                                                                             >  2:64290/1‑150 (MQ=255)      ctgcGTAGAGATGACAACGACTGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTga                                                                                                                                             <  2:397939/150‑1 (MQ=255)      ctgcGTAGAGATGACAACGACTGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTga                                                                                                                                             <  1:433070/150‑1 (MQ=255)             gagaTGACAACGACTGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTc                                                                                                                                      >  2:1976632/1‑150 (MQ=255)                  gACAACGACTGCTGTGCCAGACAACTGTGAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGt                                                                                                                                 <  2:2304812/150‑1 (MQ=255)                    cAACGACTGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGTTGCAG‑GTGACTGCAGcgggttttttattgcccgagaga                                                                                                                               <  1:731288‑M2/150‑24 (MQ=255)                     aaCGACTGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTga                                                                                                                                             >  2:980876/1‑135 (MQ=255)                     aaCGACTGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTga                                                                                                                                             <  1:980876/135‑1 (MQ=255)                     aaCGACTGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGcc                                                                                                                              >  1:2422708/1‑150 (MQ=255)                     aaCGACTGCTGTGCCAGAAAAGTGTTACGGCGAATTTTAATTTTTGTAAAACTGGACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGcc                                                                                                                              >  2:1845320/1‑150 (MQ=255)                         aCTGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCTGCg                                                                                                                          >  2:169656/1‑150 (MQ=255)                          ctgctgTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGTTGCAG‑GTGACTGCAGcgggttttttattgcccgagagacgcgca                                                                                                                         >  2:731288‑M2/1‑121 (MQ=255)                           tgctgTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGaa                                                                                                                        >  1:1703635/1‑150 (MQ=255)                                    aGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAg                                                                                                               >  1:1493807/1‑150 (MQ=255)                                        aaCTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCTG‑CGTCCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCgg                                                                                                           <  1:169656/150‑1 (MQ=255)                                          cTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGa                                                                                                         <  1:2215359/150‑1 (MQ=255)                                           tGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGCGCCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCGGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAg                                                                                                        <  1:1204204/150‑1 (MQ=255)                                                aGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAg                                                                                                   >  1:172889/1‑150 (MQ=255)                                                aGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAg                                                                                                   >  1:1261770/1‑150 (MQ=255)                                                 ggCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAgc                                                                                                  <  2:1081325/150‑1 (MQ=255)                                                  gCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGa                                                                                                         <  1:991225/142‑1 (MQ=255)                                                  gCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGa                                                                                                         >  2:991225/1‑142 (MQ=255)                                                            attttTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGt                                                                                                                                 <  2:70940/108‑1 (MQ=255)                                                            attttTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGt                                                                                                                                 >  1:70940/1‑108 (MQ=255)                                                             tttttGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCt                                                                                      <  2:1128805/150‑1 (MQ=255)                                                              ttttGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCtt                                                                                     >  1:2373322/1‑150 (MQ=255)                                                                  ataacccTGTACGGGTCCCAATCTGAAGCGCGCGACTGC‑GCGCCTCTCGGGAAATAAAAC‑CCCCGCTGCAG‑TCACCTCAAACGGGTTTGAGAAATTCACGGTCCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTc                                                                                 <  2:2373322/144‑1 (MQ=255)                                                                     aaaNTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGc                                                                              >  2:1516453/1‑150 (MQ=255)                                                                     aaaCTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGc                                                                              <  1:2280672/150‑1 (MQ=255)                                                                      aaCTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGct                                                                             >  2:613279/1‑150 (MQ=255)                                                                              tGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGTTGCAGGTGAC‑TGCAGcgggttttttattgcccga                                                                                                                                   <  1:2436394‑M2/88‑20 (MQ=255)                                                                              tGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGTTGCAGGTGAC‑TGCAGcgggttttttattgcccga                                                                                                                                   >  2:2436394‑M2/1‑69 (MQ=255)                                                                                gTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACg                                                                   >  1:1807565/1‑150 (MQ=255)                                                                                 tCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGc                                                                                       >  2:1412041/1‑129 (MQ=255)                                                                                 tCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGc                                                                                       <  1:1412041/129‑1 (MQ=255)                                                                                   gCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTAAGCCATTCGTAACGCTg                                                                >  2:661722/1‑150 (MQ=255)                                                                                    cAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGc                                                               <  1:1372393/150‑1 (MQ=255)                                                                                     aaTCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGTGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCg                                                              >  2:2202266/1‑150 (MQ=255)                                                                                     aaTCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCg                                                              >  1:1974306/1‑150 (MQ=255)                                                                                       tCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGAc                                                            >  2:254503/1‑150 (MQ=255)                                                                                          gAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCg                                                         >  2:819709/1‑150 (MQ=255)                                                                                           aaGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGc                                                        <  1:1775338/150‑1 (MQ=255)                                                                                             gCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTg                                                      >  1:296904/1‑150 (MQ=255)                                                                                               aCGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGAt                                                    >  1:478149/1‑150 (MQ=255)                                                                                                cgcgACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATa                                                   <  1:1997312/150‑1 (MQ=255)                                                                                                cgcgACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATa                                                   <  1:2311014/150‑1 (MQ=255)                                                                                                cgcgACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATa                                                   <  1:2022544/150‑1 (MQ=255)                                                                                                 gcgACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATAc                                                  >  1:1605432/1‑150 (MQ=255)                                                                                                 gcgACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATAc                                                  >  1:426414/1‑150 (MQ=255)                                                                                                   gACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCg                                                >  1:1949982/1‑150 (MQ=255)                                                                                                   gACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCg                                                <  2:172889/150‑1 (MQ=255)                                                                                                   gACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGCGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCg                                                <  2:1261770/150‑1 (MQ=255)                                                                                                     cTGC‑GCGTGTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGAAAGGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGc                                              <  2:1703635/150‑1 (MQ=255)                                                                                                     cTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGc                                              <  2:1974306/150‑1 (MQ=255)                                                                                                          gcgTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCt                                          >  1:1554553/1‑150 (MQ=255)                                                                                                          gcgTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCt                                          <  1:1060262/150‑1 (MQ=255)                                                                                                          gcgTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCt                                          >  2:734217/1‑150 (MQ=255)                                                                                                            gTCTCT‑GGGCAAAAAAAACCCCCGCGGCGG‑TCCCCTGAAAGGGGTTTGAGAAATTCCGGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGc                                        <  2:1807565/150‑1 (MQ=255)                                                                                                              ctctcGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCca                                      <  1:734217/150‑1 (MQ=255)                                                                                                                 tcGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCtt                                                                          <  2:2071877/111‑1 (MQ=255)                                                                                                                 tcGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCtt                                                                          >  1:2071877/1‑111 (MQ=255)                                                                                                                     gCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCg                               >  2:2450311/1‑150 (MQ=255)                                                                                                                     gCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCg                               <  1:1976632/150‑1 (MQ=255)                                                                                                                      cAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCgg                              <  1:1516453/150‑1 (MQ=255)                                                                                                                        aTAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGa                            <  2:296904/150‑1 (MQ=255)                                                                                                                         tAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCt                                                                                  <  2:1209329/95‑1 (MQ=255)                                                                                                                         tAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCt                                                                                  >  1:1209329/1‑95 (MQ=255)                                                                                                                           aaaa‑aCCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGc                                                                                       >  1:2161427/1‑88 (MQ=255)                                                                                                                           aaaa‑aCCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGc                                                                                       <  2:2161427/88‑1 (MQ=255)                                                                                                                            aaa‑aCCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGGTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTcc                        >  1:882205/1‑150 (MQ=255)                                                                                                                            aaa‑aCCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTcc                        >  1:934768/1‑150 (MQ=255)                                                                                                                             aa‑aCCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCa                       <  2:69431/150‑1 (MQ=255)                                                                                                                                aCCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAgg                     >  1:960766/1‑150 (MQ=255)                                                                                                                                  ccGCTGCAG‑TCACCTGCAAcgggttttttattgcccgagagacgcgcagtcgcgtgcttcagattgcgaccagtacagttttacaaaaattaaaattcgccttaacagttgtctggcacagcagtcgttgtcatctctacgcagcactgc                   <  1:288034‑M2/150‑132 (MQ=255)                                                                                                                                  ccGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCg                   >  2:1669855/1‑150 (MQ=255)                                                                                                                                   cGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAACCTGTGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGa                  <  1:1845320/150‑1 (MQ=255)                                                                                                                                    gCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGc                                                        <  2:640747/111‑1 (MQ=255)                                                                                                                                    gCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGc                                                        >  1:640747/1‑111 (MQ=255)                                                                                                                                     cTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGc                >  2:1211137/1‑150 (MQ=255)                                                                                                                                       gCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCa              <  2:1605432/150‑1 (MQ=255)                                                                                                                                        cAG‑TCACCTGCAAcgggttttttattgcccgagagacgcgcagtcgcgtgcttcagattgcgaccagtacagttttacaaaaattaaaattcgccttaacagttgtctggcacagcagtcgttgtcatctctacgcagcactgcgtgata             >  2:288034‑M2/1‑13 (MQ=255)                                                                                                                                            tCACCTGCAACGGGATTGCGAAATTCACGGTTCCGGCGAAGCGGGCAAGCGGTGAGCTTAGCGTCAGAAAGTCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTg          >  2:1330220/1‑150 (MQ=255)                                                                                                                                              aCCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTgac        >  1:1351964/1‑150 (MQ=255)                                                                                                                                              aCCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTgac        <  1:613279/150‑1 (MQ=255)                                                                                                                                              aCCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTCGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTgac        >  1:759639/1‑150 (MQ=255)                                                                                                                                                cTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAAc                                                                    <  2:455155/88‑1 (MQ=255)                                                                                                                                                cTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAAc                                                                    >  1:455155/1‑88 (MQ=255)                                                                                                                                                cTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTTCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTgacga      <  1:2289345/150‑1 (MQ=255)                                                                                                                                                 tGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTgacgac     >  2:149449/1‑150 (MQ=255)                                                                                                                                                    aaCGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTCCCTGGCACGGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGAGAGCCCAGGCCAGCCAGTGGACGACGGc  >  1:747793/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CAGTGCTGCGTAGAGATGACAACGACTGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGC‑GCGTCTCTCGGGCAATAAAAA‑ACCCGCTGCAG‑TCACCTGCAACGGGTTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTGACGACGGC  >  NC_002947/161558‑161851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.