New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 209102 = | NA (NA) | 4 (0.040) | 3/250 | NT | 100% | coding (14608/26049 nt) | PP_0168 | putative surface adhesion protein |
? | NC_002947 | 209737 = | 0 (0.000) | coding (15243/26049 nt) | PP_0168 | putative surface adhesion protein |
GCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACTGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGCGCTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAG > NC_002947/209612‑209884 | gttttgtcgagtgtcagttgctcgaacgtaccgacgtccgcacctccaacggttgcgatcgacatcacgacagggtcgttggtgccgacgtagacgttgtccggggcagtgacggtagcagtgccCACGGTGCCGGCCAACGGCACCGTg < 1:2334223‑M2/25‑1 (MQ=255) tcacgacagggtcgttagcgccgacgtagacgttgtccggagcagtcacggtggcagtgccCACTGTGCCGGCCAACGGCACCg > 1:1790288‑M2/62‑84 (MQ=255) tcacgacagggtcgttagcgccgacgtagacgttgtccggagcagtcacggtggcagtgccCACTGTGCCGGCCAACGGCACCg < 2:1790288‑M2/23‑1 (MQ=255) acggtggcagtgccCACGGTGCCGTTGGCCGGCACAGTGGGCACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGCGCTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCtt > 2:264761‑M2/15‑150 (MQ=255) ccCACTGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGCGCTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAg > 2:645598‑M2/3‑150 (MQ=255) | GCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACTGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGCGCTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAG > NC_002947/209612‑209884 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |