New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 614300	21 (0.230)	9 (0.130)	6/188	NT	29.6%	intergenic (‑116/+62)	dxs/ispA	1‑deoxyxylulose‑5‑phosphate synthase/farnesyl diphosphate synthase
	?	NC_002947	= 614316	27 (0.380)					intergenic (‑132/+46)	dxs/ispA	1‑deoxyxylulose‑5‑phosphate synthase/farnesyl diphosphate synthase

TGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGTGCGGCCAGCGCCTGGTCGCGCAGTTCGATT  >  NC_002947/614168‑614464                                                                                                                                                     |                                                                                                                                                     tGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATc                                                                                                                                                     >  1:1309084‑M2/1‑149 (MQ=255) tGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATc                                                                                                                                                     >  1:826724‑M2/1‑149 (MQ=255) tGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATCCAAGATc                                                                                                                                                     >  2:976159‑M2/1‑149 (MQ=255)  gAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcg                                                                                                                                                    >  2:268056‑M2/1‑148 (MQ=255)    aaCGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgca                                                                                                                                                  >  2:1771110‑M2/1‑146 (MQ=255)         cgtGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgc                                                                                                                                             >  1:1839484‑M2/1‑141 (MQ=255)           tGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgg                                                                                                                                           <  2:1792303‑M2/150‑12 (MQ=255)           tGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgg                                                                                                                                           >  1:366621‑M2/1‑139 (MQ=255)           tGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgg                                                                                                                                           >  1:1471230‑M2/1‑139 (MQ=255)                aTCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaa                                                                                                                                      >  1:1792303‑M2/1‑134 (MQ=255)                     gCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccga                                                                                                                                 >  1:364979‑M2/1‑129 (MQ=255)                     gCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccga                                                                                                                                 >  1:1714522‑M2/1‑129 (MQ=255)                     gCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATc                                                                                                                                                     >  2:2185435‑M2/1‑129 (MQ=255)                     gCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATc                                                                                                                                                     <  1:2185435‑M2/130‑2 (MQ=255)                             ttATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacag                                                                                                                         <  1:1917430‑M2/150‑30 (MQ=255)                             ttATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatc                                                                                                                               <  2:1141550‑M2/144‑24 (MQ=255)                             ttATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatc                                                                                                                               >  1:1141550‑M2/1‑121 (MQ=255)                                      tgtgAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATc                                                                                                                                                     >  1:960639‑M2/1‑112 (MQ=255)                                      tgtgAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATc                                                                                                                                                     <  2:960639‑M2/113‑2 (MQ=255)                                                             cATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacag                                                                                                                         <  2:1668335‑M2/118‑30 (MQ=255)                                                             cATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacag                                                                                                                         >  1:1668437‑M2/1‑89 (MQ=255)                                                             cATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacag                                                                                                                         >  1:1668335‑M2/1‑89 (MQ=255)                                                             cATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacag                                                                                                                         <  2:1668437‑M2/118‑30 (MQ=255)                                                               ttGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggta                                                                                                                                        <  1:1619006‑M2/101‑15 (MQ=255)                                                               ttGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggta                                                                                                                                        >  2:1619006‑M2/1‑87 (MQ=255)                                                                           tGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACgcgc                                                                           >  1:1020897/1‑150 (MQ=255)                                                                                       cacaGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAg                                                               <  2:1917430/150‑1 (MQ=255)                                                                                                     cccccTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCtttt                                                 >  2:1443426/1‑150 (MQ=255)                                                                                                               gATCGGGGTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGGTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAAccc                                       >  2:1548806/1‑150 (MQ=255)                                                                                                                aTCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCt                                      >  2:571953/1‑150 (MQ=255)                                                                                                                aTCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCt                                      >  1:638655/1‑150 (MQ=255)                                                                                                                 tCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGcc                                             <  2:1120678/142‑1 (MQ=255)                                                                                                                 tCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGcc                                             >  1:1120678/1‑142 (MQ=255)                                                                                                                  cGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTg                                    <  2:638655/150‑1 (MQ=255)                                                                                                                    ggTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTa                                                                                                      >  1:1486039/1‑82 (MQ=255)                                                                                                                    ggTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTa                                                                                                      <  2:1486039/82‑1 (MQ=255)                                                                                                                      tttACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTCCGGCGATAAACATGTTCACTCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGt                                >  1:1743214/1‑150 (MQ=38)                                                                                                                           ccGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgccgcgtcttcacacacctataacgactcgcctgatgccca                           <  2:897693‑M2/150‑124 (MQ=255)                                                                                                                           ccGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgccgcgtcttcacacacctataacgactcgcctgatgccca                           <  2:980481‑M2/150‑124 (MQ=255)                                                                                                                           ccGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgccgcgtcttcacacacctataac                                            <  2:309986‑M2/133‑107 (MQ=255)                                                                                                                           ccGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgccgcgtcttcacacacctataac                                            >  1:309986‑M2/1‑27 (MQ=255)                                                                                                                           ccGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGTGCGGc                           >  2:2151993/1‑150 (MQ=255)                                                                                                                           ccGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGTGCGGc                           >  2:2085429/1‑150 (MQ=255)                                                                                                                           ccGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCAGATCCTACAGGGATAGGTGAAGCTGCTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGTGCGGc                           >  1:387013/1‑150 (MQ=255)                                                                                                                             gcgAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgccgcgtcttcacacacctataacgactcgcctgatgcccacg                         <  1:1160630‑M2/150‑126 (MQ=255)                                                                                                                             gcgAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgcc                                                                 <  1:1991441‑M2/110‑86 (MQ=255)                                                                                                                             gcgAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgcc                                                                 >  2:1991441‑M2/1‑25 (MQ=255)                                                                                                                             gcgAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGTGCGGccg                         >  2:1185340/1‑149 (MQ=255)                                                                                                                                  tGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcactcttcccacaatggg                                                                           <  2:250042‑M2/95‑76 (MQ=255)                                                                                                                                  tGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcactcttcccacaatggg                                                                           >  1:250042‑M2/1‑20 (MQ=255)                                                                                                                                      tCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTa                                                                                                  <  1:1123692/68‑1 (MQ=255)                                                                                                                                      tCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTa                                                                                                  >  2:1123692/1‑68 (MQ=255)                                                                                                                                      tCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGTGCGGCCAGCGCCTGGt                >  1:2299056/1‑150 (MQ=255)                                                                                                                                        ggCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGTGCGGCCAGCGCCTGGTcg              >  2:1321248/1‑150 (MQ=255)                                                                                                                                        ggCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGTGCGGCCAGCGCCTGGTcg              >  2:799675/1‑150 (MQ=255)                                                                                                                                         gCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCt                                      <  1:417304/125‑1 (MQ=255)                                                                                                                                         gCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCt                                      >  2:417304/1‑125 (MQ=255)                                                                                                                                           aaaTTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGTGCGGCCAGCGCCTGGTCgcgc           >  2:1029902/1‑150 (MQ=255)                                                                                                                                           aaaTTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGTGCGGCCAGCGCCTGGTCgcgc           >  1:2417457/1‑150 (MQ=255)                                                                                                                                              ttCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGtt                                                                                                   <  1:1778874/59‑1 (MQ=255)                                                                                                                                              ttCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGtt                                                                                                   >  2:1778874/1‑59 (MQ=255)                                                                                                                                                 aaGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACaa                                                                                     >  2:54552/1‑70 (MQ=255)                                                                                                                                                 aaGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACaa                                                                                     <  1:54552/70‑1 (MQ=255)                                                                                                                                                 aaGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGc                                              >  1:1233404/1‑109 (MQ=255)                                                                                                                                                 aaGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGc                                              <  2:1233404/109‑1 (MQ=255)                                                                                                                                                 aaGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGTGCGGCCAGCGCCTGGTCGCGCAGTTCg     >  2:686217/1‑150 (MQ=255)                                                                                                                                                    aTCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCTGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGTGCGGCCAGCGCCTGGTCGCGCAGTTCGAtt  >  2:494984/1‑150 (MQ=255)                                                                                                                                                    aTCGCATTCGCGGGTAAACCAGATCCTACAGGGATAGGTGAAGCTGCTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGTGCGGCCAGCGCCTGGTCGCGCAGTTCGAtt  <  2:387013/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     TGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGTGCGGCCAGCGCCTGGTCGCGCAGTTCGATT  >  NC_002947/614168‑614464

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.