New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1371738 =76 (0.810)4 (0.050) 4/228 NT 6.0% intergenic (+5/+67) PP_1196/rimO hypothetical protein/ribosomal protein S12 methylthiotransferase
?NC_002947 1371789 = 55 (0.650)intergenic (+56/+16) PP_1196/rimO hypothetical protein/ribosomal protein S12 methylthiotransferase

CCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTGCATCGAAGAAGCTGC  >  NC_002947/1371641‑1371938
                                                                                                                                                    |                                                                                                                                                     
ccGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAACAGCTTCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGc                                                                                                                                                      <  1:1879027/150‑1 (MQ=255)
 cGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCa                                                                                                                                                     >  2:1836604/1‑150 (MQ=255)
 atctgTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCACTTAGGAGAACGCCGGGGCAGGGGCTTTGCa                                                                                                                                                     <  1:437638/146‑1 (MQ=255)
  gCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAg                                                                                                                                                    <  1:2440941/150‑1 (MQ=255)
  gCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAg                                                                                                                                                    <  2:223292/150‑1 (MQ=255)
  gCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAg                                                                                                                                                    <  1:332571/150‑1 (MQ=255)
      tGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCtt                                                                                                                                                >  2:748984/1‑150 (MQ=255)
      tGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCACTGCGCCGTTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAgagat                                                                                                                                                >  2:437638/1‑146 (MQ=255)
        gAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCa                                                                                                                                              >  2:1110507/1‑150 (MQ=255)
        gAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTAAAAACCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGccgcc                                                                                                                                              >  1:23454/1‑146 (MQ=255)
             tCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGt                                                                                                                                         >  1:2036612/1‑150 (MQ=255)
             tCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGt                                                                                                                                         >  2:1001478/1‑150 (MQ=255)
             tCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGt                                                                                                                                         >  2:327759/1‑150 (MQ=255)
             tCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGt                                                                                                                                         >  2:637216/1‑150 (MQ=255)
                  ctctATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGAATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAg                                                                                                                                    <  1:1516278/150‑1 (MQ=255)
                   tctATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGa                                                                                                                                   >  1:770690/1‑150 (MQ=255)
                    ctATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGAt                                                                                                                                  <  1:1836604/150‑1 (MQ=255)
                     tATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATg                                                                                                                                 <  1:1190015/150‑1 (MQ=255)
                           gTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCa                                                                                                                           <  2:964439/150‑1 (MQ=255)
                              aaaGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGtttt                                                                                                                                      >  1:2278691/1‑136 (MQ=255)
                              aaaGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGtttt                                                                                                                                      <  2:2278691/136‑1 (MQ=255)
                              aaaGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCNGcc                                                                                                                        <  2:1516646/150‑1 (MQ=255)
                                    ttCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATg                                                                                                                  >  2:1661109/1‑150 (MQ=255)
                                    ttCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATg                                                                                                                  <  1:327759/150‑1 (MQ=255)
                                          gATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGt                                                                                                                                         <  2:727169/121‑1 (MQ=255)
                                          gATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGt                                                                                                                                         >  1:727169/1‑121 (MQ=255)
                                                aGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACtcgtcg                                                                                                      <  2:2036612/150‑1 (MQ=255)
                                                  cccGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGAAGGCATCAAAAGTTTTAGATGAGTTCAGCCCACAGGGCGTACTCGTCGGc                                                                                                    >  2:1454979/1‑150 (MQ=255)
                                                   ccGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCa                                                                                                   <  1:748984/150‑1 (MQ=255)
                                                      gATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGTGTTCAGCCCACATGTCGTACTCGTCGGCATcc                                                                                                >  2:2398877/1‑150 (MQ=255)
                                                            gAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGttt                                                                                                                                       >  1:2962/1‑105 (MQ=255)
                                                            gAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGttt                                                                                                                                       <  2:2962/105‑1 (MQ=255)
                                                             aGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACtcgt                                                                                                        <  1:1717271/135‑1 (MQ=255)
                                                             aGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACtcgt                                                                                                        >  2:1717271/1‑135 (MQ=255)
                                                             aGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCacac                                                                                         <  1:1501493/150‑1 (MQ=255)
                                                                 cggcCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTa                                                                                                             <  2:1037932/126‑1 (MQ=255)
                                                                 cggcCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTa                                                                                                             >  1:1037932/1‑126 (MQ=255)
                                                                     cTGTTGATGTGTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCa                                                                                                                                                     <  1:533573/82‑1 (MQ=255)
                                                                     cTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCa                                                                                                                                                     >  2:533573/1‑82 (MQ=255)
                                                                       gATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCAc                                                                               <  1:1661109/150‑1 (MQ=255)
                                                                            tGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGt                                                                          >  1:1603599/1‑150 (MQ=255)
                                                                                tCACACGTTCTTACAATAAAGCCCCTGCGCGGGTCATGCACTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCCTCGGCATCCACCACACGGCAACGCACTTTGTCGcc                                                                      >  2:635167/1‑150 (MQ=255)
                                                                                   cacGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTgg                                                                   <  2:290494/150‑1 (MQ=255)
                                                                                   cacGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTgg                                                                   >  1:2262878/1‑150 (MQ=255)
                                                                                    acGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGc                                                                  <  2:931641/150‑1 (MQ=255)
                                                                                    acGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGc                                                                  >  1:873557/1‑150 (MQ=255)
                                                                                        tCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGa                                                              >  1:2257628/1‑150 (MQ=255)
                                                                                          tGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGaaa                                                            <  2:1603599/150‑1 (MQ=255)
                                                                                           gACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGNGGCNGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCGCATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAAc                                                           >  1:1875934/1‑150 (MQ=255)
                                                                                              aaaaaaGCCCCTGCGCCGGTCATTCCCTATGGAGAAGGACGGGGCCGGGGGTTTGAAGGCTTCAGCCGTTGGAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAGCGCACTTTGTCGCCTGGCTTGAAACCAt                                                        >  1:45744/1‑150 (MQ=255)
                                                                                              aaaaaaGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCAt                                                        <  2:201780/150‑1 (MQ=255)
                                                                                                aaaaGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAg                                                                                                                          >  2:115651/1‑82 (MQ=255)
                                                                                                aaaaGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAg                                                                                                                          <  1:115651/82‑1 (MQ=255)
                                                                                                aaaaGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATgg                                                      >  1:1191835/1‑150 (MQ=255)
                                                                                                 AAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGt                                                     <  1:585075‑M1/150‑1 (MQ=255)
                                                                                                 AAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGt                                                     <  2:633675‑M1/150‑1 (MQ=255)
                                                                                                     CCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGcc                                                 <  1:1384604‑M1/150‑1 (MQ=255)
                                                                                                      ccctgccccggcgttctccatagggaatgaccggcgcaggggctttGCAGGCTTCAGCCGGTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCa                                                >  2:2038112‑M2/47‑150 (MQ=255)
                                                                                                       cctgccccggcgttctccatagggaatgaccggcgcaggggctttGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGc                                                                  <  2:570266‑M2/86‑1 (MQ=255)
                                                                                                       cctgccccggcgttctccatagggaatgaccggcgcaggggctttGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGc                                                                  >  1:570266‑M2/46‑131 (MQ=255)
                                                                                                       CCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACtt                                                                             <  1:2078915‑M1/120‑1 (MQ=255)
                                                                                                       CCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACtt                                                                             >  2:2078915‑M1/1‑120 (MQ=255)
                                                                                                        ctgccccggcgttctccatagggaatgaccggcgcaggggctttGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATc                                              >  2:1147067‑M2/45‑150 (MQ=255)
                                                                                                           CGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGAt                                           >  1:1454979‑M1/1‑150 (MQ=255)
                                                                                                           CGCCGGTCATTCCCTAGGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCAAACGGCAAAGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGAt                                           >  2:1047131‑M1/1‑150 (MQ=255)
                                                                                                            gcCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGGCGCCTGGCTTGAAACCATGGTCGCCATCGATg                                          <  1:460332/150‑1 (MQ=255)
                                                                                                             ccGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGa                                         >  1:368494/1‑150 (MQ=255)
                                                                                                               ggTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAac                                       <  2:873557/150‑1 (MQ=255)
                                                                                                               ggTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAac                                       >  1:1716771/1‑150 (MQ=255)
                                                                                                                       ccTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGcc                               <  1:1110507/150‑1 (MQ=255)
                                                                                                                        cTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCg                              >  2:1714279/1‑150 (MQ=255)
                                                                                                                        cTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCg                              >  1:313977/1‑150 (MQ=255)
                                                                                                                            ggAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGa                          <  2:368494/150‑1 (MQ=255)
                                                                                                                                   gCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGc                                                  <  2:1290010/119‑1 (MQ=255)
                                                                                                                                   gCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGc                                                  >  1:1290010/1‑119 (MQ=255)
                                                                                                                                     cGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATTAACACGCTGCCGTCGATTTCCGGTg                 <  1:65070/150‑1 (MQ=255)
                                                                                                                                         gcaggggctttGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAGCGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTGCATc             <  2:45744‑M2/139‑1 (MQ=255)
                                                                                                                                            ggggctttGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGTCGTCGATTTCCGGTGCATCgaa          <  1:1147067‑M2/142‑1 (MQ=255)
                                                                                                                                            ggggctttGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTCCCGTCGATTTCCGGTGCATCgaa          <  2:1191835‑M2/142‑1 (MQ=255)
                                                                                                                                             gggctttGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTGCATCgaag         >  2:2179543‑M2/8‑150 (MQ=255)
                                                                                                                                             gggctttGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTGCATCgaag         >  1:442685‑M2/8‑150 (MQ=255)
                                                                                                                                               gctttGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTGCATCgaggaa       >  1:401582‑M2/6‑150 (MQ=255)
                                                                                                                                                    gCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGCCATCCACCACCCGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACCCTGCCGTCGATTTCCGGTGCATCGAAGAAGCTGc  >  2:462168/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
CCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACGCCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTGCATCGAAGAAGCTGC  >  NC_002947/1371641‑1371938

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.