New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 1511127100 (1.070)6 (0.070) 5/236 NT 5.9% pseudogene (482/1851 nt) PP_1325 putative lipoprotein
?NC_002947 = 1511141 98 (1.110)pseudogene (468/1851 nt) PP_1325 putative lipoprotein

Only 100 of 112 total aligned reads displayed.

CGGCGAAGGCCAGGCTGGTCCAGCCAGCCAGGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCTGGGGTGGGCCAGGGCGGTCAGCGCTGCCTTGGGCTG  >  NC_002947/1510993‑1511287
                                                                                                                                                    |                                                                                                                                                  
cGGCGAAGGCCAGGCTGGTCCAGCCAGCCAGGGTCTGATCGTTGGTTGGATGTGACATGTGCGCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCCAGCAGCGGGGCCAGCAGGATGc                                                                                                                                                   <  2:1797081‑M2/150‑2 (MQ=255)
     aaGGCCAGGCTGGTCCAGCCAGCCAGGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGcgctgc                                                                                                                                              <  1:216303‑M2/150‑7 (MQ=255)
     aaGGCCAGGCTGGTCCAGCCAGCCAGGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGcgctgc                                                                                                                                              <  1:216304‑M2/150‑7 (MQ=255)
             gCTGGTCCAGCCAGCCAGGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGc                                                                                                                                         >  1:1857066/1‑147 (MQ=255)
             gCTGGTCCAGCCAGCCAGGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGc                                                                                                                                         <  2:1857066/147‑1 (MQ=255)
             gCTGGTCCAGCCAGCCAGGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGc                                                                                                                                      >  2:669758/1‑150 (MQ=255)
              cTGGTCCAGCCAGCCAGGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCa                                                                                                                                     <  1:1008744/150‑1 (MQ=255)
                   ccagccagccagGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAg                                                                                                                                <  1:278405/150‑1 (MQ=255)
                   ccagccagccagGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGCATCCTGCTGGCCCcgctgcttggcggccaggcc                                                                                                                                >  1:2278536‑M2/1‑130 (MQ=255)
                     agccagccagGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAggg                                                                                                                              >  1:334298/1‑150 (MQ=255)
                      gccagccagGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGc                                                                                                                             <  2:348187/150‑1 (MQ=255)
                      gccagccagGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGc                                                                                                                             >  1:348187/1‑150 (MQ=255)
                       ccagccagGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGcc                                                                                                                            >  1:631023/1‑150 (MQ=255)
                       ccagccagGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGcc                                                                                                                            >  2:1691851/1‑150 (MQ=255)
                            cagGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGcc                                                                                                                       <  1:979478/150‑1 (MQ=255)
                            cagGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGcc                                                                                                                       <  2:1049470/150‑1 (MQ=255)
                                    gATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCtt                                                                                                               >  2:1705443/1‑150 (MQ=255)
                                     aTCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTc                                                                                                              >  1:2021274/1‑150 (MQ=255)
                                     aTCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTc                                                                                                              <  1:56818/150‑1 (MQ=255)
                                      tCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCg                                                                                                             >  1:515580/1‑150 (MQ=255)
                                       cGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGa                                                                                                            <  1:1705443/150‑1 (MQ=255)
                                         ttggttggCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAgc                                                                                                          >  2:132500/1‑150 (MQ=255)
                                             ttggCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTgg                                                                                                                         >  2:2070565/1‑131 (MQ=255)
                                             ttggCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTgg                                                                                                                         <  1:2070565/131‑1 (MQ=255)
                                                  tgctgcAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCgcggcggcg                                                                                                 >  1:343665/1‑150 (MQ=255)
                                                     tgcAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCCTTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTCCGAGCGCGGCGGCGTGc                                                                                              >  1:2063726/1‑150 (MQ=255)
                                                     tgcAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGATGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGc                                                                                              >  1:1371189/1‑150 (MQ=255)
                                                        aGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGcaca                                                                                           >  1:1835150/1‑150 (MQ=255)
                                                         gTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCacac                                                                                          <  2:343665/150‑1 (MQ=255)
                                                         gTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCacac                                                                                          >  2:7825/1‑150 (MQ=255)
                                                         gTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCacac                                                                                          >  2:372883/1‑150 (MQ=255)
                                                              tctGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTat                                                                                     <  1:175850/150‑2 (MQ=255)
                                                              tctGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAg                                                                                     >  2:499106/1‑150 (MQ=255)
                                                              tctGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTCTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAg                                                                                     <  2:1284647/150‑1 (MQ=255)
                                                                  caggcagCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCAGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTgc                                                                                 <  2:72536/150‑1 (MQ=255)
                                                                        tcGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGGGTTTTCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCtt                                                                           >  1:2275325/2‑150 (MQ=255)
                                                                        gCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCtt                                                                           <  2:650807/150‑1 (MQ=255)
                                                                          gAGGGGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGc                                                                         <  2:927251/150‑1 (MQ=255)
                                                                          gAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGc                                                                         <  2:1236452/150‑1 (MQ=255)
                                                                           aGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCa                                                                        <  2:487666/150‑1 (MQ=255)
                                                                            ggCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAg                                                                       <  1:499106/150‑1 (MQ=255)
                                                                            ggCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAg                                                                       <  1:7825/150‑1 (MQ=255)
                                                                             gCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCACTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAgg                                                                      >  2:1053894/1‑150 (MQ=255)
                                                                              cGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACTCTGTAGGTGCGCGCTTGCAGGt                                                                     <  2:1005163/150‑1 (MQ=255)
                                                                               gACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGGTGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGGGGGTGCGCGCTTGCAgggc                                                                    >  2:1120810/1‑148 (MQ=255)
                                                                                aCCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTgcgcgc                                                                             <  1:2393810/140‑1 (MQ=255)
                                                                                aCCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTgcgcgc                                                                             >  2:2393810/1‑140 (MQ=255)
                                                                                aCCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTgcgcgc                                                                             >  2:2392933/1‑140 (MQ=255)
                                                                                  cAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGc                                                                 >  2:766570/1‑150 (MQ=255)
                                                                                  cAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGc                                                                 >  1:272578/1‑150 (MQ=255)
                                                                                     ggCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCgg                                                              <  1:372883/150‑1 (MQ=255)
                                                                                        ccAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTg                                                                                                                          <  2:1156358/87‑1 (MQ=255)
                                                                                        ccAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTg                                                                                                                          >  1:1156358/1‑87 (MQ=255)
                                                                                         cAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGt                                                          <  2:1755615/150‑1 (MQ=255)
                                                                                         cAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCGGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGt                                                          >  2:533352/1‑150 (MQ=255)
                                                                                           gATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTc                                                        <  1:1415473/150‑1 (MQ=255)
                                                                                           gATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGCCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTc                                                        <  1:1313203/150‑1 (MQ=255)
                                                                                            aTGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCg                                                       <  1:669758/150‑1 (MQ=255)
                                                                                              ggCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGGTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGc                                                     <  2:70596/150‑1 (MQ=255)
                                                                                              ggCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGc                                                     <  1:766570/150‑1 (MQ=255)
                                                                                              ggCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGCGGCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGc                                                     <  1:159811/150‑1 (MQ=255)
                                                                                               gCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGTAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCg                                                    <  1:2135701/150‑1 (MQ=255)
                                                                                               gCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGTAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCg                                                    <  1:2135224/150‑1 (MQ=255)
                                                                                                 gTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAg                                                  >  1:2235791/1‑150 (MQ=255)
                                                                                                 gTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAg                                                  >  1:2068977/1‑150 (MQ=255)
                                                                                                 gTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAg                                                  <  1:1120810/150‑1 (MQ=255)
                                                                                                    aTTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGgcg                                               >  2:2211627/1‑150 (MQ=255)
                                                                                                      tgttgGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCt                                             <  2:631023/150‑1 (MQ=255)
                                                                                                        ttgGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGc                                           >  1:10689/1‑150 (MQ=255)
                                                                                                         tgGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCACCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGt                                                                                   <  1:555643/109‑1 (MQ=255)
                                                                                                             cttGGCGGCCAGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCt                                      >  2:1476076/3‑150 (MQ=255)
                                                                                                              cTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCTg                                     <  2:1835150/150‑1 (MQ=255)
                                                                                                               tGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCTgg                                    >  2:1081840/1‑150 (MQ=255)
                                                                                                                   ccgatctccgccAAGCAGCGGGGCCAGCAGGATGCGGTGCTGGGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCTGGGGTg                                <  2:1774216/143‑1 (MQ=255)
                                                                                                                    gcCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGTGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCTGGGGTgg                               <  2:1090052/150‑1 (MQ=255)
                                                                                                                    gcCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCTGGGGTgg                               >  1:1090052/1‑150 (MQ=255)
                                                                                                                    gcCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCTGGGGTgg                               <  2:2021274/150‑1 (MQ=255)
                                                                                                                      cTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGATGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCTGGGGTGGGc                             >  1:2017281/1‑150 (MQ=255)
                                                                                                                       tGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCTGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCTGGGGTGGGcc                            >  2:1314693/1‑150 (MQ=255)
                                                                                                                       tGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCTGGGGTGGGcc                            >  2:1734444/1‑150 (MQ=255)
                                                                                                                          ccgccAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCTGGGGTGGGCCAgg                         <  2:515580/150‑1 (MQ=255)
                                                                                                                           cgccAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTACGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCTGGGGTggagatcgg                        >  1:1774216/1‑143 (MQ=255)
                                                                                                                            gccAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCTGGGGTGGGCCAGGGc                       >  1:142050/1‑150 (MQ=255)
                                                                                                                               aaGCAGCGGGGCCAGCAGGATGcgctgcttggcggccaggccgccagcaccaacaatgacgccatctgggccttggtcgcctcgctgcctgcagagcaactgcagcagccaaccaacgatcagaccctggctgg                                    <  2:1289815‑M2/134‑113 (MQ=255)
                                                                                                                               aaGCAGCGGGGCCAGCAGGATGcgctgcttggcggccaggccgccagcaccaacaatgacgccatctgggccttggtcgcctcgctgcctgcagagcaactgcagcagccaaccaacgatcagaccctggctgg                                    >  1:1289815‑M2/1‑22 (MQ=255)
                                                                                                                               aaGCAGCGGGGCCAGCAGGATGcgctgcttggcggccaggccgccagcaccaacaatgacgccatctgggccttggtcgcctcgc                                                                                     <  1:2373199‑M2/85‑64 (MQ=255)
                                                                                                                               aaGCAGCGGGGCCAGCAGGATGcgctgcttggcggccaggccgccagcaccaacaatgacgccatctgggccttggtcgcctcgc                                                                                     >  2:2373199‑M2/1‑22 (MQ=255)
                                                                                                                               aaGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGTCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCTGGGGTGGGCCAGGGCGGt                    >  1:257765/1‑150 (MQ=255)
                                                                                                                               aaGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCa                                                            <  1:1563061/110‑1 (MQ=255)
                                                                                                                                      ggggCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCTGGGGTGGGCCAGGGCGGTCAGCGCt             <  2:1371189/150‑1 (MQ=255)
                                                                                                                                       gggCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCTGGGGTGGGCCAGGGCGGTCAGCGCTg            >  1:2271056/1‑150 (MQ=255)
                                                                                                                                        ggCCAGCATGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGTCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCTGGGGTGGGCCAGGGCGGTCAGCGCTGc           <  2:257765/150‑1 (MQ=255)
                                                                                                                                        ggCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCTGGGGTGGGCCAGGGCGGTCAGCGCTGc           >  1:926465/1‑150 (MQ=255)
                                                                                                                                        ggCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCTGGGGTGGGCCAGGGCGGTCAGCGCTGc           >  1:1138803/1‑150 (MQ=255)
                                                                                                                                            agcagGATGcgctgcttggcggccaggccgccagcaccaacaatgacgccatctgggccttggtcgcctcgctgcctgcagagcaactgcagcagccaaccaacgatcagaccctggctggctggaccagcctggccttcgccgtgaaaa       >  2:2278536‑M2/1‑9 (MQ=255)
                                                                                                                                            agcagGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCTGGGGTGGGCCAGGGCGGTCAGCGCTGCCTTg       <  1:1168725/150‑1 (MQ=255)
                                                                                                                                            agcagGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGAGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCTGGGGTGGGCCAGGGCGGTCAGCGCTGCCTTg       >  2:1285248/1‑150 (MQ=255)
                                                                                                                                                 gATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCgcggcg                                                                                                    <  1:1942192/52‑1 (MQ=255)
                                                                                                                                                 gATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCgcggcg                                                                                                    >  2:1942192/1‑52 (MQ=255)
                                                                                                                                                 gATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCTGGGGTGGGCCAGGGCGGTCAGCGCTGCCTTGGGCTg  >  2:542517/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
CGGCGAAGGCCAGGCTGGTCCAGCCAGCCAGGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATCGGCTTCGAGCGCGGCGGCGTGCACACTGTAGGTGCGCGCTTGCAGGTCTGCCGGCAGTTCGGCGAGGCGCTGCAGGCTGGGGTGGGCCAGGGCGGTCAGCGCTGCCTTGGGCTG  >  NC_002947/1510993‑1511287

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.