New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 157523179 (0.850)10 (0.110) 8/238 NT 12.1% intergenic (‑175/+35) pcaP/galP‑II porin/porin‑like protein
?NC_002947 = 1575253 70 (0.790)intergenic (‑197/+13) pcaP/galP‑II porin/porin‑like protein

CAGGATAGCCTGCAGTCACCACCATCATCAGCTCAGCGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGTTGCGCCATTTCAGCGACAGGTCCTTGAAGCTGCCCGACTGCACCACATAG  >  NC_002947/1575105‑1575398
                                                                                                                                                    |                                                                                                                                                 
cAGGATAGCCTGCAGTCACCACCATCATCAGCTCAGCGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGa                                                                                                                                                  >  1:569364‑M2/1‑149 (MQ=255)
cAGGATAGCCTGCAGTCACCACCATCATCAGCTCAGCGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGa                                                                                                                                                  >  1:2433241‑M2/1‑149 (MQ=255)
   gATAGCCTGCAGTCACCACCATCATCAGCTCAGCGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGaggc                                                                                                                                               >  2:439182‑M2/1‑146 (MQ=255)
   gATAGCCTGCAGTCACCACCATCATCAGCTCAGCGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGaggc                                                                                                                                               <  1:1888842‑M2/150‑5 (MQ=255)
        ccTGCAGTCACCACCATCATCAGCTCAGCGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAAtt                                                                                                                                          <  2:1888842/150‑1 (MQ=255)
           gCAGTCACCACCATCATCAGCTCAGCGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAg                                                                                                                                       <  1:1199401/150‑1 (MQ=255)
            cAGTCACCACCATCATCAGCTCAGCGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGt                                                                                                                                      <  1:37027/150‑1 (MQ=255)
              gTCACCACCATCATCAGCTCAGCGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTca                                                                                                                                    <  2:769014/150‑1 (MQ=255)
               tCACCACCATCATCAGCTCAGCGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTcac                                                                                                                                   >  2:1057217/1‑150 (MQ=255)
                 accaccATCATCAGCTCAGCGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACag                                                                                                                                 >  1:1178504/1‑150 (MQ=255)
                 accaccATCATCAGCTCAGCGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACag                                                                                                                                 <  1:2103346/150‑1 (MQ=255)
                  ccaccaTCATCAGCTCAGCGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAg                                                                                                                                       <  2:2449014/143‑1 (MQ=255)
                  ccaccaTCATCAGCTCAGCGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAg                                                                                                                                       >  1:2449014/1‑143 (MQ=255)
                  ccaccaTCATCAGCTCAGCGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACaga                                                                                                                                <  1:1057217/150‑1 (MQ=255)
                  ccaccaTCATCAGCTCAGCGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACaga                                                                                                                                >  2:2331796/1‑150 (MQ=255)
                   caccaTCATCAGCTCAGCGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGTTGTATCCTCGTAGATGCCAATTGAGTCACagaa                                                                                                                               >  2:2228980/1‑150 (MQ=255)
                   caccaTCATCAGCTCAGCGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACagaa                                                                                                                               >  1:1027656/1‑150 (MQ=255)
                   caccaTCATCAGCTCAGCGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACagaa                                                                                                                               >  2:2448799/1‑150 (MQ=255)
                     ccaTCATCAGCTCAGCGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACagaaga                                                                                                                             <  1:1566625/150‑1 (MQ=255)
                         catcaGCTCAGCGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCa                                                                                                                         <  1:2066000/150‑1 (MQ=255)
                           tcagctcagcGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGc                                                                                                                       <  1:1060602/150‑1 (MQ=255)
                              gctcagcGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGa                                                                                                                    >  1:1366415/1‑150 (MQ=255)
                              gctcagcGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATAGAGGCACAGAAGATTCAGCGGa                                                                                                                    >  2:550876/1‑150 (MQ=255)
                                tcagcGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATa                                                                                                                  >  1:354165/1‑150 (MQ=255)
                                          gcggcAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTGTATCCGCGAAGTGGCCAAGGGAGTCACAGAAGATTGGGCGGAGAACTCACAATc                                                                                                        >  2:1946673/1‑150 (MQ=255)
                                             gcAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAg                                                                                                     <  1:1659072/150‑1 (MQ=255)
                                               aGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGACGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCg                                                                                                   <  1:550876/150‑1 (MQ=255)
                                               aGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCg                                                                                                   <  2:354165/150‑1 (MQ=255)
                                                   cGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAg                                                                                                                        >  1:661280/1‑125 (MQ=255)
                                                   cGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAg                                                                                                                        <  2:661280/125‑1 (MQ=255)
                                                      aCTGGGCCATTCGTGGGAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCa                                                                                            <  2:60970/150‑1 (MQ=255)
                                                        tGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATc                                                                                          <  1:2331796/150‑1 (MQ=255)
                                                           gCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGaa                                                                                       <  2:1158982/150‑1 (MQ=255)
                                                                  aTGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTg                                                                                >  1:1110481/1‑150 (MQ=255)
                                                                     gCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTg                                                                             <  1:2448799/150‑1 (MQ=255)
                                                                     gCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTg                                                                             <  1:1807948/150‑1 (MQ=255)
                                                                     gCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTCGATCTTGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTg                                                                             <  1:1946673/150‑1 (MQ=255)
                                                                      cAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCACTTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGc                                                                            >  1:94532/1‑150 (MQ=255)
                                                                             ttCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTACTAGCGGGATTATCCGCGAAGAGGCCAATTGAGACACAGAAGATTCAGCGGATAACTCACAATCACGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTc                                                                     <  2:71344/150‑1 (MQ=255)
                                                                                atcaCGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGc                                                                                                    >  2:1594913/1‑116 (MQ=255)
                                                                                atcaCGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGc                                                                                                    <  1:1594913/116‑1 (MQ=255)
                                                                                 tcaCGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGa                                                                 >  1:347498/1‑150 (MQ=255)
                                                                                 tcaCGCTGTTGCCAATGATGCCTGCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGa                                                                 <  2:1366415/150‑1 (MQ=255)
                                                                                        gTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAAGTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATgg                                                          >  2:1375162/1‑150 (MQ=255)
                                                                                            ccAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCg                                                                                                                      >  1:602724/1‑86 (MQ=255)
                                                                                            ccAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCg                                                                                                                      <  2:602724/86‑1 (MQ=255)
                                                                                            ccAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGa                                                      <  1:1812711/150‑1 (MQ=255)
                                                                                             aaaTGATGCTTTTAATAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCTAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAg                                                     <  2:1321866/149‑1 (MQ=255)
                                                                                              aaTGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGt                                                    <  2:1474951/150‑1 (MQ=255)
                                                                                              aaTGATGCCTTCAAAAGGGAGGGCGACTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGGACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGt                                                    >  1:983749/1‑150 (MQ=255)
                                                                                                 gatgCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGTTgc                                                 >  2:2420271/1‑150 (MQ=255)
                                                                                                 gatgCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGTTgc                                                 <  1:2228980/150‑1 (MQ=255)
                                                                                                 gatgCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGTTgc                                                 <  2:592937/150‑1 (MQ=255)
                                                                                                     ccTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGTTGCGCCa                                             >  1:559316/1‑150 (MQ=255)
                                                                                                      cTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGc                                                                            <  2:882293/118‑1 (MQ=255)
                                                                                                      cTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGc                                                                            >  1:882293/1‑118 (MQ=255)
                                                                                                      cTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGTTGCGCCAt                                            >  1:1895295/1‑150 (MQ=255)
                                                                                                        tCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGTTGCGCCAttt                                          <  2:559316/150‑1 (MQ=255)
                                                                                                            aaGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGTTGCGCCATTTCAGc                                      >  1:596566/1‑150 (MQ=255)
                                                                                                                gagggCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGTTGCGCCATTTCAGCGACa                                  >  1:1871627/1‑150 (MQ=255)
                                                                                                                 agggCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGTTGCGCCATTTCAGCGACAg                                 <  1:899470/150‑1 (MQ=255)
                                                                                                                     cGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGTTGCGCCATTTCAGCGACAGGTcc                             <  1:1716333/150‑1 (MQ=255)
                                                                                                                           gCCTATTCGCGGGTTTATCCGCGAAGaggccagacgccctcccttttgaaggcatcattggcaacagcgtgatgaaaaccctgccatgaattgcccagtgcgagctgccgccattcgctgagctgatgatggtggtgactgcaggctatc                       <  2:2234677‑M2/150‑125 (MQ=255)
                                                                                                                           gCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCg                                                                                                   >  1:499441/1‑74 (MQ=255)
                                                                                                                           gCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCg                                                                                                   <  2:499441/74‑1 (MQ=255)
                                                                                                                            ccTATTCGCGGGTTTATCCGCGAAGaggccagacgccctcccttttgaaggcatcattgg                                                                                                                <  1:1163051‑M2/60‑36 (MQ=255)
                                                                                                                            ccTATTCGCGGGTTTATCCGCGAAGaggccagacgccctcccttttgaaggcatcattgg                                                                                                                >  2:1163051‑M2/1‑25 (MQ=255)
                                                                                                                             cTATTCGCGGGTTTATCCGCGAAGaggccagacgccctcccttttgaaggcatcattggcaacagcgtgatgaaaaccctgccatgaattgcccagtgcgagctgccgccattcgctgagctgatgatggtggtgactgcaggctatcct                     <  1:2174192‑M2/150‑127 (MQ=255)
                                                                                                                             cTATTCGCGGGTTTATCCGCGAAGaggccagacgccctcccttttgaaggcatcattg                                                                                                                 >  2:1776694‑M2/1‑24 (MQ=255)
                                                                                                                             cTATTCGCGGGTTTATCCGCGAAGaggccagacgccctcccttttgaaggcatcattg                                                                                                                 <  1:1776694‑M2/58‑35 (MQ=255)
                                                                                                                              tATTCGCGGGTTTATCCGCGAATaggccagacgccctcccttttgaaggcatcattggcaacagcgtgatgaaaaccctgccatgaattgcccagtgcgagctgccgccattcgctga                                                    <  2:165878‑M2/118‑96 (MQ=255)
                                                                                                                              tATTCGCGGGTTTATCCGCGAATaggccagacgccctcccttttgaaggcatcattggcaacagcgtgatgaaaaccctgccatgaattgcccagtgcgagctgccgccattcgctga                                                    >  1:165878‑M2/1‑23 (MQ=255)
                                                                                                                              tATTCGCGGGTTTATCCGCGAAGaggccagacgccctcccttttgaaggcatcattggcaacagcgtgatgaaaaccctgccatgaattgcccagtgcgagctgccgccattcgctgagctgatgatggtggtgactgcaggctatcctg                    <  1:818549‑M2/150‑128 (MQ=255)
                                                                                                                                 tCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGTTGCGCCATTTCAGCGACAGGTCCTTGAAGCTGccc                 <  1:2420271/150‑1 (MQ=255)
                                                                                                                                   gcgGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGTTGCGCCATTTCAGCGACAGGTCCTTGAAGCTGCCCGa               <  1:1595398/150‑1 (MQ=255)
                                                                                                                                       gTTTATCCGCGAATaggccagacgccctcccttttgaaggcatcattggcaacagcgtgatgaaaaccctgccatgaattgcccagtgcgagctgccgccattcgctaatcagatgatggtgttgacggcaggctatcctgatcagtatc           <  2:982253‑M2/150‑137 (MQ=255)
                                                                                                                                       gTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTg                                                                                >  1:2048336/1‑81 (MQ=255)
                                                                                                                                       gTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTg                                                                                <  2:2048336/81‑1 (MQ=255)
                                                                                                                                       gTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACACACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGTTGCGCCATTTCAGCGACAGGTCCTTGAAGCTGCCCGACTGc           >  2:1040622/1‑150 (MQ=255)
                                                                                                                                         ttATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGTTGCGCCATTTCAGCGACAGGTCCTTGAAGCTGCCCGACTGcac         <  2:1871627/150‑1 (MQ=255)
                                                                                                                                         ttATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGTTGCGCCATTTCAGCGACAGGTCCTTGAAGCTGCCCGACTGcac         <  2:1657418/150‑1 (MQ=255)
                                                                                                                                            tCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGTTGCGCCATTTCAGCAACAGGTCCTTGAAGCTGCCCGACTGcaccac      >  2:1979124/1‑150 (MQ=255)
                                                                                                                                              cgcgAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGTTGCGCCATTTCAGCGACAGGTCCTTGAAGCTGc                   <  1:510781/135‑1 (MQ=255)
                                                                                                                                              cgcgAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGTTGCGCCATTTCAGCGACAGGTCCTTGAAGCTGCCCGACTGCACCACAt    >  2:955529/1‑150 (MQ=255)
                                                                                                                                              cgcgAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGTTGCGCCATTTCAGCGACAGGTACTTGAAGCTGc                   >  2:510781/1‑135 (MQ=255)
                                                                                                                                                cgAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGTTGCGCCATTTCAGCGACAGGTCCTTGAAGCTGCCCGACTGCACCACATAg  <  2:877303/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
CAGGATAGCCTGCAGTCACCACCATCATCAGCTCAGCGAATGGCGGCAGCTCGCACTGGGCAATTCATGGCAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAGTCGCGACGCATGGTCGAGTTGCGCCATTTCAGCGACAGGTCCTTGAAGCTGCCCGACTGCACCACATAG  >  NC_002947/1575105‑1575398

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.