| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2032853 = | NA (NA) | 6 (0.070) | 6/238 | NT | 32.7% | coding (291/1665 nt) | pgi‑I | glucose 6‑phosphate isomerase |
| ? | NC_002947 | 2032878 = | 13 (0.140) | coding (316/1665 nt) | pgi‑I | glucose 6‑phosphate isomerase | |||||
CTCAAAAAACCTGATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGATGGCCTGTGGCGCGGCTACAGC > NC_002947/2032730‑2033000 | gctgtagccgcgccacaggccatcgtgaatgcgaccaaccagttcggtaatctggttgagcaccttgtgcacttccggcatgacgttcacgccgttgacgctgagtttgtcacctacaggccggcgcaaggcggtgtgcagcaccggaCg > 1:980687‑M2/149‑150 (MQ=255)ctCAAAAAACCTGATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCg > 2:1821665/1‑150 (MQ=35) tCAAAAAACCTGATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCgg > 2:1323479/1‑150 (MQ=35) gtagccgcgccacaggccatcgtgaatgcgaccaaccagttcggtaatctggttgagcaccttgtgcacttccggcatgacgttcacgccgttgacgctgagtttgtcacctacaggccggcgcaaggcggtgtgcagcaccggaCGGcc < 1:861474‑M2/5‑1 (MQ=255) aaaaaaCCTGATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGcc > 1:2414097/1‑150 (MQ=33) aaaaaCCTGATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCt > 1:1311341/1‑150 (MQ=32) atccTCATCACCGAGCAATGACGCGATCTGCTGGTCAACCTGGCTAATAACGTGGGCCTGCAGGACGCCATCAAGTCGCTGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCCGCCTGTa < 2:1085107/148‑1 (MQ=11) ccTGATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAgg > 1:1758364/1‑150 (MQ=32) tGATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTGCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCCCACCGCCTTGCGCCGGCCTGTAGGTg > 2:52018/1‑150 (MQ=17) aCCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGATGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCTTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGGAGGTGACtaa < 2:278690/150‑1 (MQ=255) aCCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCATCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACaaa > 2:111267/1‑150 (MQ=17) aCCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCATCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACaaa > 2:111748/1‑150 (MQ=17) gAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTc > 2:479986/1‑150 (MQ=32) aaaGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCg > 1:1816561/1‑150 (MQ=32) aTCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCg > 1:1957684/1‑150 (MQ=32) tCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGt < 1:1323479/150‑1 (MQ=32) gTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTc < 2:1311341/150‑1 (MQ=32) gTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTc > 2:2203970/1‑150 (MQ=32) gccgttgacgctgagtttgtcacctacaggccggcgcaaggcggtgtgcagcaccggaCGGc > 1:1149‑M2/59‑62 (MQ=255) gccgttgacgctgagtttgtcacctacaggccggcgcaaggcggtgtgcagcaccggaCGGc < 2:1149‑M2/4‑1 (MQ=255) ctacaggccggcgcaaggcggtgtgcagcaccggaCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAg > 1:392879‑M2/36‑87 (MQ=255) ctacaggccggcgcaaggcggtgtgcagcaccggaCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAg < 2:392879‑M2/52‑1 (MQ=255) aggccggcgcaaggcggtgtgcagcaccggaCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGATGGCCTGTGGCGCGGCTa > 2:1347783‑M2/32‑150 (MQ=255) cggcgcaaggcggtgtgcagcaccggaCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGATGGCCTGTGGCGCGGCTACAGc < 1:1347783‑M2/123‑1 (MQ=255) cgcaaggcggtgtgcagcaccggaCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGc < 2:506446‑M2/64‑1 (MQ=255) cgcaaggcggtgtgcagcaccggaCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGc > 1:506446‑M2/25‑88 (MQ=255) | CTCAAAAAACCTGATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGATGGCCTGTGGCGCGGCTACAGC > NC_002947/2032730‑2033000 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |