New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3513211 =73 (0.780)4 (0.050) 4/238 NT 5.5% coding (1836/4158 nt) PP_3108 rhs family protein
?NC_002947 3513240 = 68 (0.770)coding (1865/4158 nt) PP_3108 rhs family protein

CACACTGGTGACCCAGGTCAGCTACCCGGATGGCAGCACTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAACGCCAGCACCTGGTCGCAGTAACCGACGCGCTGAACCAGACCACCA  >  NC_002947/3513091‑3513386
                                                                                                                                                     |                                                                                                                                                  
cacaCTGGTGACCCAGGTCAGCTACCCGGATGGCAGCACTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGa                                                                                                                                                    >  1:673752/1‑150 (MQ=255)
  cacTGGTGACCCAGGTCAGCTACCCGGATGGCAGCACTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATg                                                                                                                                                  <  2:955732/150‑1 (MQ=255)
  cacTGGTGACCCAGGTCAGCTACCCGGATGGCAGCACTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATg                                                                                                                                                  <  1:810124/150‑1 (MQ=255)
     tGGTGACCCAGGTCAGCTACCCGGATGGCAGCACTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGa                                                                                                                                               >  2:1392270/1‑150 (MQ=255)
       gTGACCCAGGTCAGCTACCCGGATGGCAGCACTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGAcc                                                                                                                                             >  2:2124074/1‑150 (MQ=255)
        tGACCCAGGTCAGCTACCCGGATGGCAGCACTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACTGCCTGCCGCACACCATCATCGATGCGACCt                                                                                                                                            >  1:138847/1‑150 (MQ=255)
          aCCCAGGTCAGCTACCCGGATGGCAGCACTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTAc                                                                                                                                          >  2:1786028/1‑150 (MQ=40)
            ccAGGTCAGCTACCCGGATGGCAGCACTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACaa                                                                                                                                        >  1:540389/1‑150 (MQ=39)
            ccAGGTCAGCTACCCGGATGGCAGCACTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACaa                                                                                                                                        >  2:1475696/1‑150 (MQ=39)
            ccAGGTCAGCTACCCGGATGGCAGCACTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACaa                                                                                                                                        >  2:1361033/1‑150 (MQ=38)
                gTCAGCTACCCGGATGGCAGCACTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTcc                                                                                                                                    <  2:1544624/150‑1 (MQ=39)
                  cAGCTACCCGGATGGCAGCACTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCaa                                                                                                                                  <  1:1392270/150‑1 (MQ=39)
                   aGCTACCCGGATGGCAGCACTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAg                                                                                                                                 <  2:1750192/150‑1 (MQ=38)
                   aGCTACCCGGATGGCAGCACTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAg                                                                                                                                 <  1:2138884/150‑1 (MQ=39)
                    gCTACCCGGATGGCAGCACTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACAGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGt                                                                                                                                >  1:2147897/1‑150 (MQ=255)
                         ccGGATGGCAGCACTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCtg                                                                                                                           >  1:2431522/1‑150 (MQ=39)
                          tagcggtagtacgtactcttgcccgagcagtcctggtagcgctcgacctgggccagggtgttccaccacaggtacttggacttgtaggtcgcatCGATGACGGCCTGCCGCACACCATCATCGATg                                                                                                                                                  >  1:477821‑M1/95‑126 (MQ=255)
                          tagcggtagtacgtactcttgcccgagcagtcctggtagcgctcgacctgggccagggtgttccaccacaggtacttggacttgtaggtcgcatCGATGACGGCCTGCCGCACACCATCATCGATg                                                                                                                                                  <  2:477821‑M1/32‑1 (MQ=255)
                           ggATGGCAGCACTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCtgtg                                                                                                                         <  1:774033/150‑1 (MQ=38)
                              tGGCAGCACTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCCAACATCATCGGACCTGAACTCCTGTTTGTGCTGGCCGCACTCCATCATCGATGCGACCTACAAGTCCAAGTACCTgtggtg                                                                                                                      <  1:2124074/150‑1 (MQ=9)
                              tGGCAGCACTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTgtggtg                                                                                                                      <  2:540389/150‑1 (MQ=39)
                               ggCAGCACTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGtggtgg                                                                                                                     <  1:1361033/150‑1 (MQ=38)
                                gcagcaCTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGAt                                                                                                                                                   <  1:2049001/119‑1 (MQ=255)
                                gcagcaCTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGAt                                                                                                                                                   >  2:2049001/1‑119 (MQ=255)
                                 cagcaCTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGaa                                                                                                                   <  2:673752/150‑1 (MQ=38)
                                    caCTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAacac                                                                                                                <  2:2380349/150‑1 (MQ=37)
                                          gCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGc                                                                                                          >  1:1203285/1‑150 (MQ=35)
                                            gAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGCACCTGTGGTGGAACACCCCGGccc                                                                                                        >  2:734977/1‑150 (MQ=25)
                                            gAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCCCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGccc                                                                                                        <  1:258361/150‑1 (MQ=25)
                                             aGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCa                                                                                                       >  2:2321031/1‑150 (MQ=34)
                                              gcgcGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACAGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAg                                                                                                      <  2:2147897/150‑1 (MQ=25)
                                               cgcgTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAgg                                                                                                     <  2:305826/150‑1 (MQ=35)
                                                       gacgacAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAgcgc                                                                                             >  1:477847/1‑150 (MQ=32)
                                                        acgacAAGGGCAACCTGCTAGCCGAATTCGACGTCCTCGGCCAGATGACCGGGTACCTGAACAGCGCCGACGGCCTGCCGCACACCATCATCGATGCCACCTCCAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCt                                                                                            >  2:1057546/1‑150 (MQ=11)
                                                            cAAGGGCAACCTGCGCGCCGAATTCAATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCa                                                                                        <  1:519907/150‑1 (MQ=21)
                                                                  cAACCTGCTCGACGAATTCCATGCCCTCGGCCAAATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGCACTACTAGTCCAATCACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTg                                                                                  <  1:501309/150‑1 (MQ=11)
                                                                    aCCTGCTCGCCGAATTCGATGCCCTCGGCCAGATTACTGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGAAGCGAACTACAAGTCCAAGTACCTTTGGGGGAACACCCTGGCCCAGGTCGAGCGCTACCACGACTGCt                                                                                >  1:907297/1‑150 (MQ=11)
                                                                       tGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGTCTGCTCgg                                                                             >  1:1284005/1‑150 (MQ=25)
                                                                       tGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCgg                                                                             >  2:1816/1‑150 (MQ=35)
                                                                         cTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAg                                                                                       >  1:2194938/1‑138 (MQ=37)
                                                                         cTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAg                                                                                       <  2:2194938/138‑1 (MQ=35)
                                                                          tCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCa                                                                          >  1:673603/1‑150 (MQ=35)
                                                                           tgCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCaa                                                                         <  1:2352543/149‑1 (MQ=21)
                                                                             ccGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCCCCCCGTCATCGATGCGCCCTACAAGACGAAGTACCTGTTGTGTAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAagc                                                                       <  2:990572/150‑2 (MQ=11)
                                                                             ccGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTAACAGGACTGCCCggcacaga                                                                       >  2:2352543/1‑144 (MQ=255)
                                                                              cGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCa                                                                                        <  1:1407186/132‑1 (MQ=35)
                                                                              cGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCa                                                                                        >  2:1407186/1‑132 (MQ=35)
                                                                               gAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAgt                                                                     >  1:829684/1‑150 (MQ=35)
                                                                               gAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAgt                                                                     >  1:1362888/1‑150 (MQ=37)
                                                                                 aTTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTc                                                                               <  2:2289159/138‑1 (MQ=37)
                                                                                 aTTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTc                                                                               >  1:2289159/1‑138 (MQ=37)
                                                                                     gATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGACGCGCCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAgtacgtac                                                               >  1:1730904/1‑150 (MQ=255)
                                                                                       tGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGtacta                                                             >  1:2231083/1‑150 (MQ=38)
                                                                                              ggCCAGATCACCGAGTACCTGAAAAGCGATGACGGATTGCCGCACACTGTCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTAt                                                      <  2:2231083/150‑1 (MQ=14)
                                                                                                ccAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGa                                                    >  2:915252/1‑150 (MQ=38)
                                                                                                ccAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGAGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGa                                                    <  1:1595767/150‑1 (MQ=255)
                                                                                                    aTGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGaa                                                <  2:1864267/150‑1 (MQ=40)
                                                                                                         cGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAACGCCa                                           >  1:118956/1‑150 (MQ=255)
                                                                                                               ccTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAACGCCAGCACCt                                     <  1:1786028/150‑1 (MQ=255)
                                                                                                               ccTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAACGCCAGCACCt                                     >  2:1983522/1‑150 (MQ=255)
                                                                                                                ctggaaggCGATGGCGGCCTTCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAACGCCAGCACCTg                                    <  2:1357156/143‑1 (MQ=255)
                                                                                                                cTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTTCTCGGGCAAGAGTACGTACTACCGCTATGa                                                    >  2:96830/1‑134 (MQ=38)
                                                                                                                cTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTCCCGCTATGACGAACGCCAGCACCTg                                    >  2:1195103/1‑150 (MQ=255)
                                                                                                                cTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGa                                                    <  1:96830/134‑1 (MQ=38)
                                                                                                                     catcgatgatggtgtgcggcaggccgtcatcgATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTa                                                       >  1:477821‑M2/33‑126 (MQ=255)
                                                                                                                     catcgatgatggtgtgcggcaggccgtcatcgATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTa                                                       <  2:477821‑M2/94‑1 (MQ=255)
                                                                                                                      aGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCTCATGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAACGCCAGCACCTGGTCGCa                              <  1:1983522/150‑1 (MQ=255)
                                                                                                                      aGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAACGCCAGCACCTGGTCGCa                              <  1:1858578/150‑1 (MQ=255)
                                                                                                                      aGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAACGCCAGCACCTGGTCGCa                              <  2:477847/150‑1 (MQ=255)
                                                                                                                      aGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTAAAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAACGCCAGCACCTGGTCGCa                              <  1:734977/150‑1 (MQ=255)
                                                                                                                          atgatggtgtgcggcaggccgtcatcgATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTgg                                                                                                           >  1:2138282‑M2/28‑69 (MQ=255)
                                                                                                                          atgatggtgtgcggcaggccgtcatcgATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTgg                                                                                                           <  2:2138282‑M2/42‑1 (MQ=255)
                                                                                                                          ATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAACGCCa                                           >  1:389241‑M1/1‑133 (MQ=255)
                                                                                                                          ATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAACGCCa                                           <  2:389241‑M1/133‑1 (MQ=255)
                                                                                                                          ATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAACGCCAGCACCTGGTCGCAGTaa                          >  2:150350‑M1/1‑150 (MQ=255)
                                                                                                                          ATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAACGCCAGCACCTGGTCGCAGTaa                          <  1:150350‑M1/150‑1 (MQ=255)
                                                                                                                           TGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAACGCCAGCACCTGGTCGCAGTAAc                         >  2:2431522‑M1/1‑150 (MQ=255)
                                                                                                                            GACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAACGCCAGCACCTGGTCGCAGTAAcc                        >  1:2321031‑M1/1‑150 (MQ=255)
                                                                                                                              cGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAACGCCAGCACCTGGTCGCAGTAACCGa                      <  2:1034132/150‑1 (MQ=255)
                                                                                                                              cGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCACTTTGACTAACGCCAGCACCTGGTCGCAGTAACCGa                      >  2:2017180/1‑150 (MQ=255)
                                                                                                                               ggCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAACGCCAGCACCTGGTCGCAGTAACCGAc                     >  2:170567/1‑150 (MQ=255)
                                                                                                                                gCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCGCTCCCAGGTCTAGAGCAACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAACGCCAGCACCTGGTCGCAGTAACCGAcg                    <  1:1475696/150‑1 (MQ=14)
                                                                                                                                   tGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAACGCCAGCACCTGGTCGCAGTAACCGACgcgc                 >  1:827875/1‑150 (MQ=255)
                                                                                                                                      cGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAAc                                               >  2:253350/1‑117 (MQ=255)
                                                                                                                                      cGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAAc                                               <  1:253350/117‑1 (MQ=255)
                                                                                                                                          cacCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAACGCCAGCACCTGGTCGCAGTAACCGACGCGCTGAACCa          <  1:915252/150‑1 (MQ=255)
                                                                                                                                             catcatCGATGCGACCTACAAGTGCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTAt                                                      >  2:1188656/1‑103 (MQ=255)
                                                                                                                                             catcatCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTAt                                                      <  1:1188656/103‑1 (MQ=255)
                                                                                                                                                  tcgATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGggcacgc                                                                       >  1:1474759‑M2/4‑78 (MQ=255)
                                                                                                                                                  tcgATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAaga                                                                       <  2:1474759‑M2/78‑1 (MQ=255)
                                                                                                                                                  tcgATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAACGCCAGCACCTGGTCGCAGTAACCGACGCGCTGAACCAGAccacca  >  1:612335‑M2/4‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                  
CACACTGGTGACCCAGGTCAGCTACCCGGATGGCAGCACTTGGCGAGCGCGTTTCGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGCTCGGGCAAGAGTACGTACTACCGCTATGACGAACGCCAGCACCTGGTCGCAGTAACCGACGCGCTGAACCAGACCACCA  >  NC_002947/3513091‑3513386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.