New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4039437 =85 (0.910)10 (0.110) 7/236 NT 11.8% coding (250/864 nt) PP_3560 LysR family transcriptional regulator
?NC_002947 4039462 = 69 (0.780)coding (275/864 nt) PP_3560 LysR family transcriptional regulator

Only 100 of 109 total aligned reads displayed.

ACTGAAGGTGACCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATG  >  NC_002947/4039313‑4039611
                                                                                                                                                     |                                                                                                                                                       
cgcgccagctccgccgacatgcccgaggccacgctgatgtgtagctgcgggtgatgggccttgatccacaccagcgccttgggcaaacgccgcgccagcaccgtgtggatcgcccccaggcgcaAGCGGCCCAAGCCTGCGCGGCCGCtt                                                                                                                                                         >  2:95999‑M1/125‑150 (MQ=255)
cgcgccagctccgccgacatgcccgaggccacgctgatgtgtagctgcgggtgatgggccttgatccacaccagcgccttgggcaaacgccgcgccagcaccgtgtggatcgcccccaggcgcaAGCGGCCCAAGCCTGCGCGGCCGCtt                                                                                                                                                         >  1:1594797‑M1/125‑150 (MQ=255)
cgcgccagctccgccgacatgcccgaggccacgctgatgtgtagctgcgggtgatgggccttgatccacaccagcgccttgggcaaacgccgcgccacaatcttgttgatcgcccccaggcgcaAGCGGCCCAAGCCTGCGCGGCCGCtt                                                                                                                                                         >  1:2275294‑M1/125‑150 (MQ=255)
 cggAAGGTGACCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCAGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTg                                                                                                                                                        <  2:377135/148‑1 (MQ=255)
       gctccgccgacatgcccgaggccacgctgatgtgtagctgcgggtgatgggccttgatccacaccagcgccttgggcaaacgccgcgccagcaccgtgtggatcgcccccaggcgccAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTg                                                                                                                                                  >  2:1554328‑M1/118‑150 (MQ=255)
       gTGACCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTg                                                                                                                                                  <  1:631431/150‑1 (MQ=255)
         tccgccgacatgcccgaggccacgctgatgtgtagctgcgggtgatgggccttgatccacaccagcgccttgggcaaacgccgcgccagcaccgtgtggatcgcccccaggcgcaAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTggg                                                                                                                                                <  2:183478‑M1/35‑1 (MQ=255)
         ctccgccgacatgcccgaggccacgctgatgtgtagctgcgggtgatgggccttgatccacaccagcgccttgggcaaacgccgcgccagcaccgtgtggatcgccccctggcca‑GCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTgggg                                                                                                                                               >  2:2055030‑M1/116‑150 (MQ=255)
          aCCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTgggg                                                                                                                                               <  1:1502613/150‑1 (MQ=255)
           cgccgacatgcccgaggccacgctgatgtgtagctgcgggtgatgggccttgatccacaccagcgccttgggcaaacgccgcgccagcaccgtgtggatcgcccccaggcgcaAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTggggg                                                                                                                                              >  1:183478‑M1/114‑150 (MQ=255)
           ccTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTgggat                                                                                                                                              <  1:1902123/150‑3 (MQ=255)
               gTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGAt                                                                                                                                          <  1:130262/150‑1 (MQ=255)
                    aCCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCcaca                                                                                                                                     >  1:1936773/1‑150 (MQ=255)
                     ccGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCacac                                                                                                                                    >  1:1640553/1‑150 (MQ=255)
                         aGCCGCGGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCACGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑Tg                                                                                                                               <  1:790459/150‑1 (MQ=255)
                         aGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑Tg                                                                                                                               <  1:571582/150‑1 (MQ=255)
                             gcaggcagGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTgg                                                                                                                           <  2:2150242/150‑1 (MQ=255)
                              caggcaggTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCca                                                                                                                                       >  1:1169642/1‑138 (MQ=255)
                              caggcaggTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCca                                                                                                                                       <  2:1169642/138‑1 (MQ=255)
                                   aggTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑Cgcggc                                                                                                                    <  1:1135188/150‑1 (MQ=255)
                                          aCTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGcc                                                                                                             <  2:592711/150‑1 (MQ=255)
                                              aCCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAg                                                                                                         >  2:464585/1‑150 (MQ=255)
                                              aCCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAg                                                                                                         <  1:1187080/150‑1 (MQ=255)
                                                cGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGgc                                                                                                       >  2:2035808/1‑150 (MQ=255)
                                                 gAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCGATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGgcg                                                                                                      >  1:1966324/1‑150 (MQ=255)
                                                    gCTGGCCAGTTGGCGGTGGCCCGCGCCGAACGCCTTCTGGCTGCCTATGACGAACGGGCCGATGCCCTGGCCAGCGGCGCAAGCCTGCGCGGCGGCTTGGGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTg                                                                                                   <  2:820899/150‑1 (MQ=255)
                                                     cTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTgg                                                                                                  >  2:1741749/1‑150 (MQ=255)
                                                     cTGGCCAGTGGGCGGTGGCCCGCGCCGAAAGCCTCCTGGCTGCCTATGACGAACTGGCCGATGCCCGGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTgg                                                                                                  <  2:1710774/150‑1 (MQ=255)
                                                      tGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGGACAGGTCGTTT‑CCCAAGGCGCTGgt                                                                                                 >  1:722763/1‑150 (MQ=255)
                                                      tGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGgt                                                                                                 >  1:193865/1‑150 (MQ=255)
                                                        gCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCGTATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGgtgt                                                                                               >  1:1995728/1‑150 (MQ=255)
                                                        gCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGgtgt                                                                                               >  1:61011/1‑150 (MQ=255)
                                                        gCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGgtgt                                                                                               <  1:336987/150‑1 (MQ=255)
                                                         ccAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTtgtgtg                                                                                              <  1:12065/150‑1 (MQ=255)
                                                          cAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTgg                                                                                             >  2:59751/1‑150 (MQ=255)
                                                            ttgatccacaccagcgccttgggcaaccgccgcgccagcaccgtgtggatcgcccccaggcgcaAGCGGCCCAAGCCTGCGCGGCCGCtt                                                                                                                                                         >  2:2039502‑M1/65‑90 (MQ=255)
                                                            ttgatccacaccagcgccttgggcaaacgccgcgccagcaccgtgtggatcgcccccaggcgcaAGCGGCCCAAGCCTGCGCGGCCGCtt                                                                                                                                                         <  1:2039502‑M1/26‑1 (MQ=255)
                                                             ttGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCt                                                                                                                             >  2:1888433/1‑116 (MQ=255)
                                                             ttGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCt                                                                                                                             <  1:1888433/116‑1 (MQ=255)
                                                                  ggTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGc                                                                                     >  1:294153/1‑150 (MQ=255)
                                                                   gTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCATGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGcc                                                                                    >  2:722782/1‑150 (MQ=255)
                                                                        ccGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCa                                                                               >  2:267956/1‑150 (MQ=255)
                                                                          gcgcCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGTGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCAcc                                                                             >  1:1231904/1‑150 (MQ=255)
                                                                             ccGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCCTGGACCCTCACCCGc                                                                          >  2:1357783/1‑150 (MQ=255)
                                                                              cGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCa                                                                         >  1:1859973/1‑150 (MQ=255)
                                                                                aaaGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTg                                                                                                   >  2:911782/1‑122 (MQ=255)
                                                                                aaaGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTg                                                                                                   <  1:911782/122‑1 (MQ=255)
                                                                                aaaGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGtgtg                                                                                              >  2:2129494/1‑127 (MQ=255)
                                                                                aaaGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGtgtg                                                                                              <  1:2129494/127‑1 (MQ=255)
                                                                                aaaGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGc                                                                       >  2:1348879/1‑150 (MQ=255)
                                                                                  aGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTa                                                                     <  1:1497826/150‑1 (MQ=255)
                                                                                   gCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTac                                                                    <  1:267956/150‑1 (MQ=255)
                                                                                     cTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTacac                                                                  <  2:2121581/150‑1 (MQ=255)
                                                                                      ttCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTAcaca                                                                 >  1:332098/1‑150 (MQ=255)
                                                                                        cTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATc                                                               <  2:193865/150‑1 (MQ=255)
                                                                                         tGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCa                                                              >  1:759152/1‑150 (MQ=255)
                                                                                          ggCTGCCTATGACGCACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAg                                                             <  1:492456/150‑1 (MQ=255)
                                                                                           gCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGCTCCACCCGGTTGATGG‑C‑CGGCGGTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGc                                                            >  1:1750065/1‑150 (MQ=255)
                                                                                             tGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCaa                                                                                                          >  1:737836/1‑102 (MQ=255)
                                                                                             tGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCaa                                                                                                          <  2:737836/102‑1 (MQ=255)
                                                                                              gCCTATGACGAACTGGCCGATGCCCTGGCCAGTGGCCCAAGCCTGCGCGTCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTg                                                         <  2:1231904/150‑1 (MQ=255)
                                                                                               ccTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTgg                                                        <  2:1859973/150‑1 (MQ=255)
                                                                                                cTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTg                                                         >  2:1895894/1‑148 (MQ=255)
                                                                                                   tGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTg                                                                                                   >  1:1808141/1‑103 (MQ=255)
                                                                                                   tGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTg                                                                                                   <  2:1808141/103‑1 (MQ=255)
                                                                                                       gAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGc                                                >  1:833024/1‑150 (MQ=255)
                                                                                                          cTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGc                                                                          >  2:1745080/1‑121 (MQ=255)
                                                                                                          cTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGc                                                                          <  1:1745080/121‑1 (MQ=255)
                                                                                                           tGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGcc                                                                                    <  1:693396/110‑1 (MQ=255)
                                                                                                           tGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGcc                                                                                    >  2:693396/1‑110 (MQ=255)
                                                                                                             gCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTcg                                          >  2:1906524/1‑150 (MQ=255)
                                                                                                               cGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTcggc                                        <  1:2397424/150‑1 (MQ=255)
                                                                                                                cccccaggcgcaagcggccgcgcaggcttgggccgctTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTcggcg                                       >  1:183478‑M2/38‑150 (MQ=255)
                                                                                                                  ccccaggcgcaagcggccgcgcaggcttgggccgcTG‑GCCAGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAg                                    >  2:2055030‑M2/36‑150 (MQ=255)
                                                                                                                  cccaggcgcaagcggccgcgcaggcttgggccgctTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGa                                     <  2:183478‑M2/115‑1 (MQ=255)
                                                                                                                    caggcgcaagcggccgcgcaggcttgggccgctGGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGc                                   >  2:1554328‑M2/34‑150 (MQ=255)
                                                                                                                     ccTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCt                                  >  1:1806547/1‑150 (MQ=255)
                                                                                                                           cAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTggcgcg                            >  2:2245201/1‑150 (MQ=255)
                                                                                                                           aagcggccgcgcaggcttgggccgctTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCaa                                                                                        <  1:2039502‑M2/64‑1 (MQ=255)
                                                                                                                           aagcggccgcgcaggcttgggccgctTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTggcgcg                            >  1:1594797‑M2/27‑150 (MQ=255)
                                                                                                                             GCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCaca                                                                             <  1:145802‑M1/99‑2 (MQ=255)
                                                                                                                             GCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCAcc                                                                             >  2:145802‑M1/1‑99 (MQ=255)
                                                                                                                             GCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTggcgcggc                          >  1:464585‑M1/1‑150 (MQ=255)
                                                                                                                                gccgcgcaggcttgggccgctTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGgcgcggcgcg                       >  1:2323677‑M2/22‑150 (MQ=255)
                                                                                                                                  CCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCa                                                                                         <  2:1411401‑M1/82‑1 (MQ=255)
                                                                                                                                  CCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCa                                                                                         >  1:1411401‑M1/1‑82 (MQ=255)
                                                                                                                                  CCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTg                     <  1:2128733‑M1/150‑1 (MQ=255)
                                                                                                                                  CCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTg                     >  2:61011‑M1/1‑150 (MQ=255)
                                                                                                                                   cAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTgg                    <  2:1035459/150‑1 (MQ=255)
                                                                                                                                       ccTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGa                <  1:1348879/150‑1 (MQ=255)
                                                                                                                                          gcgcGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACgg             <  2:294153/150‑1 (MQ=255)
                                                                                                                                            gcgGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTg           >  1:812081/1‑150 (MQ=255)
                                                                                                                                             cgGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGa          <  2:2184016/150‑1 (MQ=255)
                                                                                                                                               gccgctTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCa                                                                         <  1:1188010‑M2/79‑1 (MQ=255)
                                                                                                                                                ccgctTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAATGCGCTGGTGTGTATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCt       <  1:2366842‑M2/145‑1 (MQ=255)
                                                                                                                                                 cgctTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTc      <  2:1594797‑M2/146‑1 (MQ=255)
                                                                                                                                                 cgctTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCAAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTc      >  2:1863367‑M2/5‑150 (MQ=255)
                                                                                                                                                    tTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGtgtg                                                                                              <  2:2213216‑M2/58‑1 (MQ=255)
                                                                                                                                                    tTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGtgtg                                                                                              >  1:2213216‑M2/2‑59 (MQ=255)
                                                                                                                                                     tGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATg  <  2:2128733/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                       
ACTGAAGGTGACCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGG‑TGCTGG‑CGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATG  >  NC_002947/4039313‑4039611

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.