| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4647603 = | 11 (0.120) | 6 (0.090) | 6/172 | NT | 45.2% | intergenic (+10/+121) | fusB/PP_4112 | elongation factor G 2/sulfate transporter |
| ? | NC_002947 | 4647711 = | 7 (0.110) | intergenic (+118/+13) | fusB/PP_4112 | elongation factor G 2/sulfate transporter | |||||
GGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGAATAATCGACAAA > NC_002947/4647621‑4647858 | GGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCg < 1:1042390‑M1/150‑1 (MQ=255) GTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCaa < 1:1231520‑M1/105‑1 (MQ=255) GTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCaa > 2:1231520‑M1/1‑105 (MQ=255) ACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGa > 2:737875‑M1/1‑85 (MQ=255) ACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGa < 1:737875‑M1/85‑1 (MQ=255) CCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATg < 2:1764125‑M1/150‑1 (MQ=255) CCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGCAATGACGGTTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACCGCTTCTTGCACCGCTCCGACAAATg < 1:61489‑M1/150‑1 (MQ=255) ccgctcctacaggggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGc > 1:277351‑M2/83‑150 (MQ=255) CCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGC‑‑TCGCccgcccgc > 1:1538024‑M1/1‑117 (MQ=255) CCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGC‑‑TCGCccgcccgc < 2:1538024‑M1/117‑1 (MQ=255) cGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAG‑TCAC‑AGGTTGCAACCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGca > 2:1880722/1‑150 (MQ=37) CGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGca > 1:1764125‑M1/1‑150 (MQ=255) CGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGca < 2:1889440‑M1/150‑1 (MQ=255) CGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGca < 2:327599‑M1/150‑1 (MQ=255) gctcctacaggggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGcac > 1:2107411‑M2/81‑150 (MQ=255) tcctacaggggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGcacca > 1:2096845‑M2/79‑150 (MQ=255) ctacaggggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAAtg < 2:1210335‑M2/19‑1 (MQ=255) ctacaggggggcgcacaatggttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAAtg > 1:1210335‑M2/77‑95 (MQ=255) CTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGca > 2:2063230‑M1/1‑145 (MQ=255) CTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGca < 1:2063230‑M1/145‑1 (MQ=255) ACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGAACAGACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCAcgcg < 1:456187‑M1/150‑1 (MQ=255) GATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGtt > 1:2138278‑M1/1‑82 (MQ=255) GATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGtt < 2:2138278‑M1/82‑1 (MQ=255) cGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTg > 1:2083100/1‑150 (MQ=255) cacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGc < 2:2096845‑M2/87‑1 (MQ=255) cccAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGcc > 1:2250339/1‑150 (MQ=255) aaCATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTgg > 2:2181573/1‑150 (MQ=255) cATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGc < 2:1340308/139‑1 (MQ=255) cATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGc > 1:1340308/1‑139 (MQ=255) tgtgCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAg < 2:2083100/150‑1 (MQ=255) gcCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGATGC‑‑TCGGCCGCCCGCTTGAACAGCCTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCAGCCTTGGCATAGCGCtg > 1:652034/1‑149 (MQ=39) ccatcctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTcg > 1:2079567‑M2/44‑150 (MQ=255) ctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGcttctt < 1:1330540‑M2/49‑1 (MQ=255) ctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTCTCAATGCTGC‑‑TCTCCCGCCCGCTTCAACAGcttctt > 2:1330540‑M2/39‑87 (MQ=255) ggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGttt > 2:821889‑M2/34‑150 (MQ=255) gcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCa > 1:447994‑M2/31‑150 (MQ=255) gcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCa > 2:1656491‑M2/31‑150 (MQ=255) gtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAgg > 2:672060‑M2/27‑139 (MQ=255) gtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAgg < 1:672060‑M2/113‑1 (MQ=255) acccgcgaagaggccggcacagACCGCAACAGTTTTCa > 2:1313183‑M2/23‑38 (MQ=255) acccgcgaagaggccggcacagACCGCAACAGTTTTCa < 1:1313183‑M2/16‑1 (MQ=255) ccgcgaggaggccgtcacagACCGCAACAGTTTTCAATGCTGC‑‑TCTCCCTCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAAc > 2:930689‑M2/21‑150 (MQ=255) ccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAAc > 1:175120‑M2/21‑150 (MQ=255) ccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAAc > 1:182964‑M2/21‑150 (MQ=255) ccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTACTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGGTTCCAGCGCCGCCAc > 2:329840‑M2/21‑150 (MQ=255) cgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACg > 2:974891‑M2/20‑150 (MQ=255) cgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACg < 2:2107411‑M2/131‑1 (MQ=255) gcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACgg > 1:121210‑M2/19‑150 (MQ=255) gaggccggcacagACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTAAGAAAAAAGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGaa > 1:2121648‑M2/14‑150 (MQ=255) cggcacagACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGAATAATc > 1:34388‑M2/9‑150 (MQ=255) ggcacagACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAAt < 1:174678‑M2/66‑1 (MQ=255) ggcacagACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAAt > 2:174678‑M2/8‑73 (MQ=255) acagACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCCCCACGTGCAGAAGCGTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTACGCGCCGACACGGCCGAATAATCGACa > 1:746695‑M2/5‑150 (MQ=255) agACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGAATAATCGACaaa > 2:2437369‑M2/3‑150 (MQ=255) | GGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGC‑‑TCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGAATAATCGACAAA > NC_002947/4647621‑4647858 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |