New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5279939 =93 (1.000)5 (0.060) 5/242 NT 5.1% coding (110/1086 nt) trmA tRNA/tmRNA (uridine(54)‑C5)‑methyltransferase TrmA
?NC_002947 5279975 = 96 (1.060)coding (146/1086 nt) trmA tRNA/tmRNA (uridine(54)‑C5)‑methyltransferase TrmA

Only 100 of 125 total aligned reads displayed.

GCATGAGTGCTGCTTTCGACCCCTCCTCCTACGCCACCCAGCTGGATGCCAAAGTGGCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGCCGCGCCTGAAGGCAGCCTGGCAGGCCAGC  >  NC_002947/5279828‑5280123
                                                                                                                                                   |                                                                                                                                                    
gCATGAGTGCTGCTTTCGACCCCTCCTCCTACGCCACCCAGCTGGATGCCAAAGTGGCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTcc                                                                                                                                                    >  2:2364642/1‑150 (MQ=255)
  aTGAGTGCTGCTTTCGACCCCTCCTCCTACGCCACCCAGCTGGATGCCAAAGTGGCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGc                                                                                                                                                  >  2:2432599/1‑150 (MQ=255)
    gAGTGCTGCTTTCGACCCCTCCTCCTACGCCACCCAGCTGGATGCCAAAGTGGCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCt                                                                                                                                                <  1:2432599/150‑1 (MQ=255)
      gTGCTGCTTTCGACCCCTCCTCCTACGCCACCCAGCTGGATGCCAAAGTGGCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCtgt                                                                                                                                              >  1:2005370/1‑150 (MQ=255)
         ctgctTTCGACCCCTCCTCCTACGCCACCCAGCTGGATGCCAAAGTGGCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGgc                                                                                                                                           >  2:86189/1‑150 (MQ=255)
         ctgctTTCGACCCCTCCTCCTACGCCACCCAGCTGGATGCCAAAGTGGCCCCGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCCCCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGgc                                                                                                                                           >  1:428312/1‑150 (MQ=255)
           gctTTCGACCCCTCCTCCTACGCCACCCAGCTGGATGCCAAAGTGGCCCGGCTGAGCGAGATGCTGGAACCATTCGGCGCGCCGGAACCGGCAATTTTTGGCTCACCGCGCGAGTATTACCGCCTGCCCGCCGAGTTCCGCCTGTGgcgc                                                                                                                                         >  2:192039/1‑150 (MQ=255)
              ttCGACCCCTCCTCCTACGCCACCCAGCTGGATGCCAAAGTGGCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCTACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAg                                                                                                                                      <  1:290763/150‑1 (MQ=255)
              ttCGACCCCTCCTCCGACGCCACCCAGCTGGATGCCAGCTTAGCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAg                                                                                                                                      <  1:1451591/150‑1 (MQ=255)
               tCGACCCCTCCTCCTACGCCACCCAGCTGGATGCCAAAGTGGCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGCGCATTCCCTCGTGCGCGGCGAGGTCCGCCTGTAGCGCGAgg                                                                                                                                     >  2:390460/1‑150 (MQ=255)
                 gACCCCTCCTCCTACGCCACCCAGCTGGATGCCAAAGTGGCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGAt                                                                                                                                   <  2:2005370/150‑1 (MQ=255)
                  aCCCCTCCTCCTACGCCACCCAGCTGGATGCCAAAGTGGCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATg                                                                                                                                  <  1:208058/150‑1 (MQ=255)
                  aCCCCTCCTCCTACGCCACCCAGCTGGATGCCAAAGTGGCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACGAACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATg                                                                                                                                  <  1:691672/150‑1 (MQ=255)
                      ctcctcctACGCCACCCAGCTGGATGCCAAAGTGGCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCa                                                                                                                              >  1:2439152/1‑150 (MQ=255)
                             tACGCCACCCAGCTGGATGCCAAAGTGGCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCAc                                                                                                                       >  1:2198569/1‑150 (MQ=255)
                                gCCACCCAGCTGGATGCCAAAGTGGCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTAc                                                                                                                    >  1:1885093/1‑150 (MQ=255)
                                gCCACCCAGCTGGATGCCAAAGTGGCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTAc                                                                                                                    <  2:1665527/150‑1 (MQ=255)
                                   aCCCAGCTGGATGCCAAAGTGGCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGcc                                                                                                                 >  2:954912/1‑150 (MQ=255)
                                   aCCCAGCTGGATGCCAAAGTGGCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGcc                                                                                                                 >  1:984998/1‑150 (MQ=255)
                                   aCCCAGCTGGATGCCAAAGTGGCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGcc                                                                                                                 >  1:1053848/1‑150 (MQ=255)
                                     ccAGCTGGATGCCAAAGTGGCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCAt                                                                                                               >  2:959790/1‑150 (MQ=255)
                                              tGCCAAAGTGGCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGcccc                                                                                                      >  1:960988/1‑150 (MQ=255)
                                                ccAAAGTGGCCCGGCTGCGCAAGCTGCTGGCACCGTTCGGCGCGCCGGGACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCgg                                                                                                    >  2:2040809/1‑150 (MQ=255)
                                                       ggCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGaa                                                                                             <  2:567330/150‑1 (MQ=255)
                                                        gCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAg                                                                                            <  2:431774/150‑1 (MQ=255)
                                                        gCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAg                                                                                            <  1:2297408/150‑1 (MQ=255)
                                                        gCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAg                                                                                            >  2:1936557/1‑150 (MQ=255)
                                                          ccGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCCCTACGCCATGTTCGCCCCGGGCGAGAAGca                                                                                          >  1:2369686/1‑150 (MQ=255)
                                                          ccGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGca                                                                                          >  2:1809557/1‑150 (MQ=255)
                                                             gCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTTTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACaa                                                                                       <  1:1893520/150‑1 (MQ=255)
                                                                       ctgctgGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTg                                                                             >  2:2129937/1‑150 (MQ=255)
                                                                        tgctgGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCgaga                                                                                              <  1:914205/132‑1 (MQ=255)
                                                                        tgctgGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGa                                                                            >  1:1254103/1‑150 (MQ=255)
                                                                        tgctgGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGa                                                                            <  2:1938437/150‑1 (MQ=255)
                                                                         tctgGAACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTCCGCCATGTTCGCACCGGGCGAGAAGCACAAGGCAATCCTTAt                                                                           <  1:192039/149‑1 (MQ=255)
                                                                         gctgGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGAt                                                                           <  1:2149679/150‑1 (MQ=255)
                                                                           tgGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATcg                                                                         >  1:830737/1‑150 (MQ=255)
                                                                           tgGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCAGGCGAGAAGCACAAGGCAATCCTGATcg                                                                         >  1:1567527/1‑150 (MQ=255)
                                                                           tgGCACCGTTCGGCGCGCCGGAACCGGCTGGTTTGGACTCACCGCGCGAGCATTACCGACTGCGGGCCGAGTTCCGCCTGTGGCGCGAGGGTGGCCAACGCCACTACGCCATGGTCGCCCCGGGCGAGAAGCAGAAGGCAATCCTGATcg                                                                         >  2:36555/1‑150 (MQ=255)
                                                                             gCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGtt                                                                                                                                                      >  1:543370/1‑71 (MQ=255)
                                                                                   ttCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACAACATGTCCGCCCGAGGCAAGAAACACAACGCAATCCTGATCGACGAtttt                                                                 >  2:1841922/1‑149 (MQ=255)
                                                                                    tCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTcc                                                                <  2:1053848/150‑1 (MQ=255)
                                                                                      ctcgcgcCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCCCAAGTCAATCCTGATCGACGATTTcccc                                                              <  1:2156738/148‑1 (MQ=255)
                                                                                         gcgcCGGAACCGTCTGTTTTCGACTCACCGCGCGGGCATTACCGCCTGCGCGCCGAGGTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACGACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCAtt                                                           >  2:1559946/1‑150 (MQ=255)
                                                                                         gcgcCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTcccc                                                              <  1:2156173/147‑1 (MQ=255)
                                                                                         gcgcCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCAtt                                                           <  1:1936557/150‑1 (MQ=255)
                                                                                         gcgcCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCAGGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCaag                                                           >  2:2156738/1‑148 (MQ=255)
                                                                                           gcCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTTGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAATGCAATCCTGATCGACGATTTCCCCATTGc                                                         <  2:1696640/150‑1 (MQ=255)
                                                                                             cGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCa                                                       <  2:960988/150‑1 (MQ=255)
                                                                                              ggAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAg                                                      >  1:1950303/1‑150 (MQ=255)
                                                                                              ggAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAg                                                      <  2:2198569/150‑1 (MQ=255)
                                                                                                    ggCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAgg                                                                                     >  2:1342008/1‑113 (MQ=255)
                                                                                                    ggCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTACGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAgg                                                                                     <  1:1342008/113‑1 (MQ=255)
                                                                                                     gCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGc                                               >  1:2126567/1‑150 (MQ=255)
                                                                                                         ttttCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCAt                                                                                                               >  2:472499/1‑82 (MQ=255)
                                                                                                         ttttCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCAt                                                                                                               <  1:472499/82‑1 (MQ=255)
                                                                                                           ttCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAAc                                         <  2:421036/150‑1 (MQ=255)
                                                                                                              gACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAGGCACAAGGAAATATTCAGCGTTGATTTCCCCATTGCCAGCGAACGCATCAAcgcg                                      >  1:1739387/1‑150 (MQ=255)
                                                                                                               actcggcgcgcaggcggtaatgctcgcgcggtgagtTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCAt                                             <  1:627269‑M2/106‑1 (MQ=255)
                                                                                                               actcggcgcgcaggcggtaatgctcgcgcggtgagtTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCAt                                             >  2:627269‑M2/37‑142 (MQ=255)
                                                                                                               ACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCga                                                                                                >  2:570433‑M1/1‑91 (MQ=255)
                                                                                                               ACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGt                                     >  2:1338518‑M1/1‑150 (MQ=255)
                                                                                                                CTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGtt                                    >  1:994785‑M1/1‑150 (MQ=255)
                                                                                                                CTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTGCGCCCCGGGCGAGAAGCACAAGGCAATCCTGCTCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGtt                                    >  2:256367‑M1/1‑150 (MQ=255)
                                                                                                                 tcggcgcgcaggcggtaatgctcgcgcggtgagtTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTccc                                                               >  2:2248442‑M2/35‑122 (MQ=255)
                                                                                                                 TCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATc                                                                                <  1:1415568‑M1/105‑1 (MQ=255)
                                                                                                                 TCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTg                                   <  2:1479267‑M1/150‑1 (MQ=255)
                                                                                                                 TCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTg                                   >  2:830737‑M1/1‑150 (MQ=255)
                                                                                                                   aCCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAg                                                                                                                                      >  1:1640465/1‑49 (MQ=255)
                                                                                                                   aCCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAg                                                                                                                                      <  2:1640465/49‑1 (MQ=255)
                                                                                                                   aCCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTccc                                                               <  1:186934/120‑1 (MQ=255)
                                                                                                                   aCCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGAt                                 >  1:1866030/1‑150 (MQ=255)
                                                                                                                   aCCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGAt                                 >  1:1176613/1‑150 (MQ=255)
                                                                                                                   aCCGCGCGAACATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGAt                                 >  1:1588497/1‑150 (MQ=255)
                                                                                                                      gcgcgAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGcc                              >  1:673131/1‑150 (MQ=255)
                                                                                                                      gcgcgAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGcc                              >  1:667320/1‑150 (MQ=255)
                                                                                                                      gcgcgAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGcc                              >  1:135700/1‑150 (MQ=255)
                                                                                                                        gcgAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCTAGCGAACGCATCAACGCGTTGATGCcgc                            <  2:1254103/150‑1 (MQ=255)
                                                                                                                        gcgAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGCcgc                            <  2:673131/150‑1 (MQ=255)
                                                                                                                          gAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGCCgcgc                          <  2:984998/150‑1 (MQ=255)
                                                                                                                          gAGCATTACCGCCTGAGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGCCgcgc                          >  2:801029/1‑150 (MQ=255)
                                                                                                                          aggcggtaatgctcgcgcgccgagtTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGCCgcgc                          >  2:187619‑M2/26‑150 (MQ=255)
                                                                                                                             cATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGCCGCGCCTg                       >  1:1064329/1‑150 (MQ=255)
                                                                                                                              cgatctgCCTGCGCGCCGGGTCCCGCCTGGGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGCCGCGCCTGa                      <  2:554436/144‑1 (MQ=255)
                                                                                                                                 aCCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGGCGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGCCGCGCCTGAAgg                   <  1:863354/150‑1 (MQ=255)
                                                                                                                                  ccGCCTGCGCGCCGAGTTCCGCCGGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCAACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGCCGCGCCTGAAGGc                  <  1:86189/150‑1 (MQ=255)
                                                                                                                                   cGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGCCGCGCCTGAAGGCa                 >  2:2328815/1‑150 (MQ=255)
                                                                                                                                    gCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAg                                                      <  1:261092/112‑1 (MQ=255)
                                                                                                                                    gCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAg                                                      >  2:261092/1‑112 (MQ=255)
                                                                                                                                     ccTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCTCAACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGCCGCGCCTGaaagatcg               >  1:554436/1‑144 (MQ=255)
                                                                                                                                     ccTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGCCGCGCCTGAAGGCAGc               <  2:2129983/150‑1 (MQ=255)
                                                                                                                                         cgcgcCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGCCGCGCCTGAAGGCAGCCTgg           <  1:2324230/150‑1 (MQ=255)
                                                                                                                                           cgcCGAGTTCCGCGTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGCCGCGCCTGAAGGCAGCCTGGCa         <  2:299071/150‑1 (MQ=255)
                                                                                                                                            gcCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGCCGCGCCTGAAGGCAGCCTGGCAg        >  1:241258/1‑150 (MQ=255)
                                                                                                                                            gcCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGCCGCGCCTGAAGGCAGCCTGGCAg        >  1:186346/1‑150 (MQ=255)
                                                                                                                                            gcCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGCCGCGCCTGAAGGCAGCCTGGCAg        >  1:1578936/1‑150 (MQ=255)
                                                                                                                                               gagtTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGCCGCGCCTGAAGGCAGCCTGGCAGGcc     >  2:124986‑M2/5‑150 (MQ=255)
                                                                                                                                                agtTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGCCGCGCCTGAAGGCAGCCTGGCAGGCCa    <  2:186346‑M2/147‑1 (MQ=255)
                                                                                                                                                 gtTCCGCCTGGGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGCCGCGCCTGAAGGCAGCCTGGCAGGCCAg   <  2:428312‑M2/148‑1 (MQ=255)
                                                                                                                                                  tTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGCCGCGCCTGAAGGCAGCCTGGCAGGCCAGc  <  2:365688‑M2/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
GCATGAGTGCTGCTTTCGACCCCTCCTCCTACGCCACCCAGCTGGATGCCAAAGTGGCCCGGCTGCGCGAGCTGCTGGCACCGTTCGGCGCGCCGGAACCGGCTGTTTTCGACTCACCGCGCGAGCATTACCGCCTGCGCGCCGAGTTCCGCCTGTGGCGCGAGGATGGCCAGCGCCACTACGCCATGTTCGCCCCGGGCGAGAAGCACAAGGCAATCCTGATCGACGATTTCCCCATTGCCAGCGAACGCATCAACGCGTTGATGCCGCGCCTGAAGGCAGCCTGGCAGGCCAGC  >  NC_002947/5279828‑5280123

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.