New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5689117 =88 (0.940)7 (0.080) 7/246 NT 7.8% coding (471/555 nt) pilI twitching motility protein PilI
?NC_002947 5689140 = 79 (0.860)coding (448/555 nt) pilI twitching motility protein PilI

Only 100 of 106 total aligned reads displayed.

TGGCAGTGACGGGGGTGGCAGGCTTGTTCACGTTCGCAGGTCCTATAACGCCACATCGAGAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATCCAGCACCAGCACTCGCCGCTGCTTGCCCGGTGCGGCGTGG  >  NC_002947/5688991‑5689285
                                                                                                                                                     |                                                                                                                                                  
tggCAGTGACGGGGGTGGCAGGCTTGTTCACGTTCGCAGGTCCTATAACGCCACATCGAGAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGc                                                                                                                                                    >  1:1075300/1‑150 (MQ=255)
  gCAGTGACGGGGGTGGCAGGCTTGTTCACGTTCGCAGGTCCTATAACGCCACATCGAGAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAg                                                                                                                                                  <  2:2363216/150‑1 (MQ=255)
     gTGACGGGGGTGGCAGGCTTGTTCACGTTCGCAGGTCCTATAACGCCACATCGAGAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCa                                                                                                                                                   <  2:1682335/146‑1 (MQ=255)
     gTGACGGGGGTGGCAGGCTTGTTCACGTTCGCAGGTCCTATAACGCCACATCGAGAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCa                                                                                                                                                   >  1:1682335/1‑146 (MQ=255)
          gggggTGGCAGGCTTGTTCACGTTCGCAGGTCCTATAACGCCACATCGAGAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACTCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGc                                                                                                                                          <  2:845410/150‑1 (MQ=255)
                           tCACGTTCGCAGGTCCTATAACGCCACATCGAGAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAg                                                                                                                         <  1:1866191/150‑1 (MQ=255)
                                   gCAGGTCCTATAACGCCACATCGAGAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGc                                                                                                                >  2:205096/1‑150 (MQ=255)
                                   gCAGGTCCTATAACGCCACATCGAGAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGc                                                                                                                >  2:596817/1‑150 (MQ=255)
                                   gCAGGTCCTATAACGCCACATCGAGAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGAACAGCGGCTGCGGCGGCGACAG‑CTGCAGGc                                                                                                                >  2:882333/1‑150 (MQ=255)
                                      ggTCCTATAACGCCACATCGAGAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTgg                                                                                                             >  2:140318/1‑149 (MQ=255)
                                       gTCCTATAACGCCACATCGAGAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTc                                                                                                            >  1:2067252/1‑150 (MQ=255)
                                        tCCTATAACGCCACATCGAGAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGAAGGGAACAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCg                                                                                                           >  1:844869/1‑150 (MQ=255)
                                         ccTATAACGCCACATCGAGAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGa                                                                                                          <  2:955778/150‑1 (MQ=255)
                                          cTATAACGCCACATCGAGAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAGCCTGCA‑GCTGTCgcc                                                                                                         <  2:2053967/150‑3 (MQ=255)
                                          cTATAACGCCACATCGAGAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAGCCTGCA‑GCTGTCgcc                                                                                                         >  1:2053967/1‑148 (MQ=255)
                                           tataACGCCACATCGAGAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAgg                                                                                                        <  1:1464359/150‑1 (MQ=255)
                                                 gCCAGATCGAGAAAGCACGGCTCCACGTCCATGGCGAAGGTGCTGAATATCGCCCAGTTACGTTCACGCGGAACATACCCATGCACACAGAGTAACGCAGGAGGTATTAGCCTCAGGAGCGTCGACAG‑CGGCAGGCTGTCGAGGGCAAAg                                                                                                  >  2:1729457/1‑150 (MQ=255)
                                                  ccACATCGAGAACGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGt                                                                                                 <  1:204306/150‑1 (MQ=255)
                                                  ccACATCGAGAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGt                                                                                                 >  2:577061/1‑150 (MQ=255)
                                                   cacaTCGACAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACACGGAAAATACCCCTGCACCAACCGTGGGGAGTCGGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTg                                                                                                >  2:918719/1‑150 (MQ=255)
                                                    acaTCGAGAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGc                                                                                               >  2:1620712/1‑150 (MQ=255)
                                                     caTCGAGAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCt                                                                                              <  2:1364990/150‑1 (MQ=255)
                                                      aTCGAGAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTg                                                                                             >  1:232188/1‑150 (MQ=255)
                                                       tCGCGAACGCCCGGCGCGGGGGCCAGGGCAAAGGGGCTGAAGTGCGCCCAGTTACGGTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGa                                                                                            <  2:162444/150‑1 (MQ=255)
                                                       tCGAGAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAgg                                                                                                        <  2:883614/138‑1 (MQ=255)
                                                         gagaAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAg                                                                                          >  2:396613/1‑150 (MQ=255)
                                                           gtgctgggccttcagcactttgccctcgacagcctgcagctgtcgccgccgcagccgctgatccctgCCCCTGCACAAAGCGTGCAGCGGCAGGGAt                                                                                                                                              >  2:1081928‑M1/68‑97 (MQ=255)
                                                           gtgctgggccttcagcactttgccctcgacagcctgcagctgtcgccgccgcagccgctgatccctgCCCCTGCACAAAGCGTGCAGCGGCAGGGAt                                                                                                                                              <  1:1081928‑M1/30‑1 (MQ=255)
                                                              aGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATATGCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCa                                                                                     <  1:124688/150‑1 (MQ=255)
                                                                cccGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCCTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGc                                                                                   <  1:980029/150‑1 (MQ=255)
                                                                 ccGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCa                                                                                  >  2:471752/1‑150 (MQ=255)
                                                                  cGGCGCCTGGGCCAGGGCAAAGGGGCTGCAGATCACCCACGTACGTTCACGCGGAAAATACCCCTGCAAAACGTTTACAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCAc                                                                                 <  1:532154/150‑1 (MQ=255)
                                                                      gcCTGGGCCAGGGCAAAGGGGCTGAAGATCGACCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCtcg                                                                             >  1:1044485/1‑150 (MQ=255)
                                                                        cTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCtcgtc                                                                           <  2:1075300/150‑1 (MQ=255)
                                                                        cTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCtcgtc                                                                           >  1:1541997/1‑150 (MQ=255)
                                                                          gggCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGACAGGGATCAGCGGCTGCGGGGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGa                                                                         >  1:815030/1‑150 (MQ=255)
                                                                            ctttgccctcgacagcctgcagctgtcgccgccgcagccgctgatccctgCCCCTGCACAAAGCGTGCAGCGGCAg                                                                                                                                                  <  1:2406127‑M1/26‑1 (MQ=255)
                                                                            ctttgccctcgacagcctgcagctgtcgccgccgcagccgctgatccctgCCCCTGCACAAAGCGTGCAGCGGCAg                                                                                                                                                  >  2:2406127‑M1/51‑76 (MQ=255)
                                                                             ccAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGa                                                                                                                            >  1:418308/1‑97 (MQ=255)
                                                                             ccAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGa                                                                                                                            <  2:418308/97‑1 (MQ=255)
                                                                             ccAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCa                                                                      >  2:1198052/1‑150 (MQ=255)
                                                                             ccAAGGCAAAGAGACTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACGCCTGCACAAAGCGTGCAGCGGCAGGGATCATCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGCCCCAGCACCTCGTCGACCa                                                                      <  2:1044485/150‑1 (MQ=255)
                                                                               aGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGc                                                                    <  1:577061/150‑1 (MQ=255)
                                                                                gggCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCa                                                                   >  2:1071371/1‑150 (MQ=255)
                                                                                    aaaGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAAcc                                                               >  1:2132185/1‑150 (MQ=255)
                                                                                      aGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACcga                                                             <  1:841524/150‑1 (MQ=255)
                                                                                       ggggCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACcgac                                                            <  1:1153005/150‑1 (MQ=255)
                                                                                            tGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGaa                                                         <  2:2072150/148‑1 (MQ=255)
                                                                                            tGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGaa                                                         >  1:2072150/1‑148 (MQ=255)
                                                                                             gAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAg                                                      <  2:1941399/150‑1 (MQ=255)
                                                                                              aaGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAgg                                                     <  2:2421474/150‑1 (MQ=255)
                                                                                              aaGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAgg                                                     <  1:1071371/150‑1 (MQ=255)
                                                                                              aaGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAgg                                                     >  1:825220/1‑150 (MQ=255)
                                                                                               aGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGgt                                                    <  1:1620712/150‑1 (MQ=255)
                                                                                                gATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGGCCAGCACCTCGTCGACCAGCAAACCGACGAACCGgtc                                                   >  1:129379/1‑150 (MQ=255)
                                                                                                gATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGgtc                                                   >  1:1297748/1‑150 (MQ=255)
                                                                                                gATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGgtc                                                   <  2:756513/150‑1 (MQ=255)
                                                                                                gATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGAGCGATGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGgtc                                                   <  1:2090195/150‑1 (MQ=255)
                                                                                                     cccAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTcgtcgt                                              >  2:1344864/1‑150 (MQ=255)
                                                                                                       ctgTTACGTTCACGCGGAAAATTCCCCTGCATAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGa                                            <  1:525691/148‑1 (MQ=255)
                                                                                                       cAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGa                                            <  1:471752/150‑1 (MQ=255)
                                                                                                       cAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGa                                            <  2:2416347/150‑1 (MQ=255)
                                                                                                           tACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATcca                                        <  1:205096/150‑1 (MQ=255)
                                                                                                            aCGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATccag                                       <  2:232188/150‑1 (MQ=255)
                                                                                                              gTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATccagca                                     >  2:1581245/1‑150 (MQ=255)
                                                                                                               ttCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGGCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATccagcac                                    <  1:755232/150‑1 (MQ=255)
                                                                                                                    gcgGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGaa                                                                                           <  1:576132/90‑1 (MQ=255)
                                                                                                                    gcgGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGaa                                                                                           >  2:576132/1‑90 (MQ=255)
                                                                                                                    gcgGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACcga                                                             <  1:2419194/120‑1 (MQ=255)
                                                                                                                    gcgGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACcga                                                             >  2:2419194/1‑120 (MQ=255)
                                                                                                                     cgGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATCcagcaccagcac                              <  1:396613/150‑1 (MQ=255)
                                                                                                                       gAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATcc                                         >  2:799849/1‑137 (MQ=255)
                                                                                                                       gAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATcc                                         <  1:799849/137‑1 (MQ=255)
                                                                                                                       atccctgccgctgcacgctttgtgcaggggCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCAc                                                                                 <  1:1081928‑M2/67‑1 (MQ=255)
                                                                                                                       atccctgccgctgcacgctttgtgcaggggCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCAc                                                                                 >  2:1081928‑M2/31‑97 (MQ=255)
                                                                                                                        aaaaTACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATCCAGCACCAGCACTcg                           >  1:1272458/1‑150 (MQ=255)
                                                                                                                           ctgccgctgcacgctttgtgcaggggCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAg                                                                                                  >  2:2406127‑M2/27‑76 (MQ=255)
                                                                                                                           ctgccgctgcacgctttgtgcaggggCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAg                                                                                                  <  1:2406127‑M2/50‑1 (MQ=255)
                                                                                                                             aCCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGAGCCAGCAACAGCACTcgatgct                      >  2:392193/1‑145 (MQ=255)
                                                                                                                               CCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAg                                                      <  1:1163321‑M1/116‑1 (MQ=255)
                                                                                                                               CCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAg                                                      >  2:1163321‑M1/1‑116 (MQ=255)
                                                                                                                                gctgcacgctttgtgcagcggCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATCCAGCACCAGCACTCGCCgctgct                   >  2:1955819‑M2/22‑150 (MQ=255)
                                                                                                                                ccTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATCCAGCACCAGCACTCGCCgctgct                   >  2:266450/1‑150 (MQ=255)
                                                                                                                                  tGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATCCAGCACCAGCACTCGCCGCTGCTTg                 >  1:673502/1‑150 (MQ=255)
                                                                                                                                    cacgctttgtgcaggggCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATCCAGCACCAGCACTCGCCGCTGCTTGcc               >  1:1919091‑M2/18‑150 (MQ=255)
                                                                                                                                     acaAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGTCTTTCGAGGGCAAAGTGCTGCAGCCGCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATCCAGCACCAGCACTCGCCGCTGCTTGccc              <  1:1344864/150‑1 (MQ=255)
                                                                                                                                      cgctttgtgcagcggCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATCCAGCACCAGCACTCGCCGCTGCTTGCCCg             <  1:1955819‑M2/135‑1 (MQ=255)
                                                                                                                                       aaaGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATCCAGCACCAGCACTCGCCGCTGCTTGCCCgg            >  1:226654/1‑150 (MQ=255)
                                                                                                                                           cGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATCCAGCACCAGCACTCGCCGCTGCTTGCCCGGTgcg        <  1:93304/150‑1 (MQ=255)
                                                                                                                                           cGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATCCAGCACCAGCACTCGCCGCTGCTTGCCCGGTgca        <  2:673502/150‑2 (MQ=255)
                                                                                                                                             ggCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATCCAGCACCAGCACTCGCCGCTGCTTGCCCGGTgcggc      <  2:815030/149‑1 (MQ=255)
                                                                                                                                               cAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATCCAGCACCAGCACTCGCCGCTGCTTGCCCGGTGCGGCGt    <  2:2402447/150‑1 (MQ=255)
                                                                                                                                                aGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATCCAGCACCAGCACTCGCCGCTGCTTGCCCGGTTCGGCGTg   <  1:392193/150‑1 (MQ=255)
                                                                                                                                                aGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATCCAGCACCAGCACTCGCCGCTGCTTGCCCGGTGCGGCGTg   <  1:1826222/150‑1 (MQ=255)
                                                                                                                                                aGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATCCAGCACCAGCACTCGCCGCTGCTTGCCCGGTGCGGCGTg   <  2:2132185/150‑1 (MQ=255)
                                                                                                                                                 gCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACTACTGGTCGTGATCCAGCACCAGCACTCGCCGCTGCTTGCCCGGTGCGGCGTgg  <  1:61589/150‑1 (MQ=255)
                                                                                                                                                    gCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGgt                                                    >  2:1636817‑M2/2‑97 (MQ=255)
                                                                                                                                                    gCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGgt                                                    <  1:1636817‑M2/96‑1 (MQ=255)
                                                                                                                                                     cAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATCCAGCACCAGCACTCGCCGCTGCTTGCCCGGt           <  1:2369642/137‑1 (MQ=255)
                                                                                                                                                     cAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATCCAGCACCAGCACTCGCCGCTGCTTGCCCGGt           >  2:2369642/1‑137 (MQ=255)
                                                                                                                                                     |                                                                                                                                                  
TGGCAGTGACGGGGGTGGCAGGCTTGTTCACGTTCGCAGGTCCTATAACGCCACATCGAGAAAGCCCGGCGCCTGGGCCAGGGCAAAGGGGCTGAAGATCGCCCAGTTACGTTCACGCGGAAAATACCCCTGCACAAAGCGTGCAGCGGCAGGGATCAGCGGCTGCGGCGGCGACAG‑CTGCAGGCTGTCGAGGGCAAAGTGCTGAAGGCCCAGCACCTCGTCGACCAGCAAACCGACGAACAGGTCGTCGTGATCCAGCACCAGCACTCGCCGCTGCTTGCCCGGTGCGGCGTGG  >  NC_002947/5688991‑5689285

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.