New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6002402 =115 (1.230)11 (0.140) 8/218 NT 10.1% intergenic (‑46/+100) amaA/amaB L‑pipecolate oxidase/L‑piperidine‑6‑carboxylate dehydrogenase
?NC_002947 6002454 = 96 (1.180)intergenic (‑98/+48) amaA/amaB L‑pipecolate oxidase/L‑piperidine‑6‑carboxylate dehydrogenase

Only 100 of 151 total aligned reads displayed.

GACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGCGACGCATGTAGCCTTTCCAGGCATCCGAGCCCGA  >  NC_002947/6002306‑6002600
                                                                                                                                                    |                                                                                                                                                  
gACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCt                                                                                                                                                   >  2:2328331/1‑150 (MQ=255)
 aCGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTa                                                                                                                                                  >  1:816961/1‑150 (MQ=255)
  cGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTAc                                                                                                                                                 <  1:855814/150‑1 (MQ=255)
    tgtTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCACAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTAccc                                                                                                                                               <  2:1217943/150‑1 (MQ=255)
         ccACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGaa                                                                                                                                          >  1:912063/1‑150 (MQ=255)
             aaGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCgg                                                                                                                                      >  1:2117801/1‑150 (MQ=255)
                 gttgttgACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGc                                                                                                                                  >  2:1861121/2‑150 (MQ=255)
                    gttgACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCcg                                                                                                                                              >  2:2050078/1‑135 (MQ=255)
                    gttgACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAg                                                                                                                               >  1:2365306/1‑150 (MQ=255)
                     ttgACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCgggg                                                                                                                                    <  1:1133741/144‑1 (MQ=255)
                     ttgACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGAGGCAGCGCAGTCACCCTTTCGCGAGTAAACCCTCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAgg                                                                                                                              >  1:2125067/1‑150 (MQ=255)
                          gCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGccccc                                                                                                                         >  1:1087155/1‑150 (MQ=255)
                          gCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGccccc                                                                                                                         >  2:785905/1‑150 (MQ=255)
                           cAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCTGGCCCCCg                                                                                                                        <  1:401842/150‑1 (MQ=255)
                           cAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCg                                                                                                                        <  1:779835/150‑1 (MQ=255)
                              ttCGGACATGGCCTGCTCCAGCAAGGTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGcc                                                                                                                     >  2:1851578/1‑150 (MQ=255)
                               tCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCa                                                                                                                    <  1:1198517/150‑1 (MQ=255)
                                   aCATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATgca                                                                                                                <  1:764606/150‑1 (MQ=255)
                                     aTGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCg                                                                                                                        <  2:2194333/140‑1 (MQ=255)
                                      tGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTCCAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATgcagca                                                                                                             <  1:1861121/150‑1 (MQ=255)
                                       ggCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCAt                                                                                                            >  2:1440177/1‑150 (MQ=255)
                                        gCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATc                                                                                                           >  1:1013122/1‑150 (MQ=255)
                                           ggttCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAAt                                                                                                        <  2:2146315/147‑1 (MQ=255)
                                               ccAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGCGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACAt                                                                                                    <  2:1037265/150‑1 (MQ=255)
                                               ccAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACAt                                                                                                    <  1:1529381/150‑1 (MQ=255)
                                                cAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATAc                                                                                                      <  1:516946/147‑1 (MQ=255)
                                                 aGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCa                                                                                                  <  1:1697954/150‑1 (MQ=255)
                                                 aGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCa                                                                                                  >  1:1538313/1‑150 (MQ=255)
                                                 aGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGAACACCCGCTCCTACAGGGGTCGGTGTCGCTTGGCCGAACCCTGTAGGAGCGGGTCTACCCGCGCACCGGGGGCCAGGCCCCCGGCCACGCGGCGTCAATACATCa                                                                                                  >  1:1282361/1‑150 (MQ=255)
                                                    aaTTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTc                                                                                               <  1:1473234/150‑1 (MQ=255)
                                                    aaTTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTc                                                                                               <  1:2238939/150‑1 (MQ=255)
                                                     aTTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGAGGGGAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCg                                                                                              >  1:300550/1‑150 (MQ=255)
                                                         gTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGTCATGCAGCATCAATACATCAGTCGAaca                                                                                          <  2:2365306/150‑1 (MQ=255)
                                                          ttCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAacac                                                                                         <  1:2328331/150‑1 (MQ=255)
                                                            cTTGTTGGGGCCCACGCGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGTCGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGa                                                                                       <  2:1131332/150‑1 (MQ=255)
                                                             ttgttgGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGAt                                                                                      >  2:1445999/1‑150 (MQ=255)
                                                                ttgGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGTCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATAcc                                                                                   >  1:868097/1‑150 (MQ=255)
                                                                  ggggCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATc                                                                                                           >  2:2276797/1‑124 (MQ=255)
                                                                    ggCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTgc                                                                               <  1:1851578/150‑1 (MQ=255)
                                                                      ccGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATa                                                                                     <  2:1876659/142‑1 (MQ=255)
                                                                      ccGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATa                                                                                     >  1:1876659/1‑142 (MQ=255)
                                                                      ccGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTgcgc                                                                             >  2:1760782/1‑150 (MQ=255)
                                                                        gCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCa                                                                           >  1:270441/1‑150 (MQ=255)
                                                                         ccctgcggcCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAg                                                                          >  2:1831262/5‑150 (MQ=255)
                                                                          aGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCggg                                                                                                                                     <  2:1953471/90‑1 (MQ=255)
                                                                          aGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCggg                                                                                                                                     >  1:1953471/1‑90 (MQ=255)
                                                                              cggcCCTTTGGCGGGTAAACCCGCTGCTACAGGGGTCGGTGTTGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAAGACATCAGTCGATCACGATACCCTGCGCCAGCGGCa                                                                     <  2:410501/150‑1 (MQ=255)
                                                                              cggcCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCa                                                                     <  1:2133721/150‑1 (MQ=255)
                                                                              cggcCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCa                                                                     <  2:386152/150‑1 (MQ=255)
                                                                               ggcCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCACCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAg                                                                    >  1:1623268/1‑150 (MQ=255)
                                                                                  ccTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCa                                                                     >  2:649205/1‑146 (MQ=255)
                                                                                  ccTTTCGCGGGTAAACCCGCGCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCa                                                                     <  1:649205/146‑1 (MQ=255)
                                                                                   cTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTcg                                                                >  2:2163815/1‑150 (MQ=255)
                                                                                      tCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTcggcc                                                             <  1:1664206/150‑4 (MQ=255)
                                                                                        gcgGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCa                                                                     >  1:2132436/1‑140 (MQ=255)
                                                                                         cgGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCGAGCTGCCGCTggcgcagg                                                          <  2:2295167/150‑4 (MQ=255)
                                                                                         cgGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGag                                                          <  2:1538313/150‑1 (MQ=255)
                                                                                               aaCCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTc                                                    >  2:20680/1‑150 (MQ=255)
                                                                                                  ccgctcctacagggttcgtccaagcgacaccgacccctgtaggagcgggtCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCa                                                   >  2:891095‑M2/51‑148 (MQ=255)
                                                                                                  ccgctcctacagggttcgtccaagcgacaccgacccctgtaggagcgggtCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCAc                                                  <  1:2188368‑M2/99‑1 (MQ=255)
                                                                                                  ccgctcctacagggttcgtccaagcgacaccgacccctgtaggagcgggtCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACg                                                 >  2:1115538‑M2/51‑150 (MQ=255)
                                                                                                    GCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGgt                                               <  1:1354558‑M1/150‑1 (MQ=255)
                                                                                                       CCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGtt                                            >  1:684654‑M1/1‑150 (MQ=255)
                                                                                                        CTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTg                                           >  2:376464‑M1/1‑150 (MQ=255)
                                                                                                         TACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTgg                                          <  1:209058‑M1/150‑1 (MQ=255)
                                                                                                          acagggttcgtctaagcgacaccgacccctgtaggagcgggtCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGt                                         >  2:2206238‑M2/43‑150 (MQ=255)
                                                                                                          acagggttcgtccaagcgacaccgacccctgtaggagcgggtCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGagta                                                        <  2:119750‑M2/93‑1 (MQ=255)
                                                                                                          acagggttcgtccaagcgacaccgacccctgtaggagcgggtCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGagta                                                        >  1:119750‑M2/43‑135 (MQ=255)
                                                                                                            AGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCt                                       <  2:1311078‑M1/150‑1 (MQ=255)
                                                                                                            AGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCt                                       >  2:741795‑M1/1‑150 (MQ=255)
                                                                                                              GGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTgg                                     >  1:2256192‑M1/1‑150 (MQ=255)
                                                                                                               GGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGc                                    >  2:481901‑M1/1‑150 (MQ=255)
                                                                                                               GGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGc                                    >  2:1734856‑M1/1‑150 (MQ=255)
                                                                                                                   ggTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTgg                                     <  1:337001/145‑1 (MQ=255)
                                                                                                                    gtgtCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGCGACGc                               <  1:1445999/150‑1 (MQ=255)
                                                                                                                    gtgtCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGCGACGc                               <  1:1440177/150‑1 (MQ=255)
                                                                                                                      gtCGCTTGGACGAACCCTGTGGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGCGACGCAt                             <  2:1460631/150‑1 (MQ=255)
                                                                                                                         gCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGCGACGCATGTa                          >  1:1816970/1‑150 (MQ=255)
                                                                                                                          cTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAGCACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGCGACGCATGTAg                         >  2:1301316/1‑150 (MQ=255)
                                                                                                                          cTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGCGACGCATGTAg                         <  2:209058/150‑1 (MQ=255)
                                                                                                                           ttGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAGCACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGCGACGCATGTAGc                        <  2:1372409/150‑1 (MQ=255)
                                                                                                                           ttGGACGAACCCTGTAGGAGCGGGTATCCTCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGCGACGCATGTAGc                        <  2:300550/150‑1 (MQ=255)
                                                                                                                              accgacccctgtaggagcgggtCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGCGACGCATGTAGCCtt                     <  1:1801418‑M2/128‑1 (MQ=255)
                                                                                                                                 gAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGCGACGCATGTAGCCTTTcc                  <  1:511950/150‑1 (MQ=255)
                                                                                                                                  aaCCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAGCACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGCGACGCATGTAGCCTTTCCa                 <  1:1301316/150‑1 (MQ=255)
                                                                                                                                  aaCCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGCGACGCATGTAGCCTTTCCa                 <  1:1760782/150‑1 (MQ=255)
                                                                                                                                  aaCCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGCGACGCATGTAGCCTTTCCa                 <  2:816961/150‑1 (MQ=255)
                                                                                                                                  aaCCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGCGACGCATGTAGCCTTTCCa                 >  1:943986/1‑150 (MQ=255)
                                                                                                                                  aaCCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGCGACGCATGTAGCCTTTCCa                 <  1:1311078/150‑1 (MQ=255)
                                                                                                                                   aCCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCACCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTGTGGCGACGCATGTAGCCTTTCCAg                <  2:1623268/150‑1 (MQ=255)
                                                                                                                                    ccctgtaggagcgggtCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGCGACGCATGTAGCCTTTCCAgg               >  2:820606‑M2/17‑150 (MQ=255)
                                                                                                                                     cctgtaggagcgggtCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGc                                                                      >  2:1114106‑M2/16‑94 (MQ=255)
                                                                                                                                     cctgtaggagcgggtCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGc                                                                      <  1:1114106‑M2/79‑1 (MQ=255)
                                                                                                                                     cctgtaggagcgggtCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGCGACGCATGTAGCCTTTCCAGGc              >  1:38757‑M2/16‑150 (MQ=255)
                                                                                                                                       tgtaggagcgggtCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCCTCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGCGACGCATGTAGCCTTTCCAGGCAt            >  2:326885‑M2/14‑150 (MQ=255)
                                                                                                                                           ggagcgggtCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGCGACGCATGTAGCCTTTCCAGGCATCCGa        <  1:2163815‑M2/141‑1 (MQ=255)
                                                                                                                                            gagcgggtCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGCGACGCATGTAGCCTTTCCAGGCATCCGAg       <  1:271958‑M2/142‑1 (MQ=255)
                                                                                                                                              gcgggtCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGGACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGGTCACGGTGTTGGTCTGGCGGCGCAGGGAGCCTTTCCCGGCAGACGAGcc     >  2:794303‑M2/7‑150 (MQ=255)
                                                                                                                                                  gtCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGaa                                                                                            <  1:2067199‑M2/57‑1 (MQ=255)
                                                                                                                                                  gtCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGt                                         <  1:1911585‑M2/108‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
GACGTGTTCCCACAAGCATTGTTGACGCAGTTCGGACATGGCCGGCTCCAGCAATTTGTTCTTGTTGGGGCCGCAGGGCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTCGGTGTCGCTTGGACGAACCCTGTAGGAGCGGGTCTACCCGCGAACCGGGGGCCAGGCCCCCGGCCATGCAGCATCAATACATCAGTCGAACACGATACCCTGCGCCAGCGGCAGCTCGCGCGAGTAGTTCACGGTGTTGGTCTGGCGACGCATGTAGCCTTTCCAGGCATCCGAGCCCGA  >  NC_002947/6002306‑6002600

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.