| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 36,172 | A→T | 8.1% | intergenic (+57/+26) | PP_0032 → / ← PP_0033 | hypothetical protein/undecaprenyl‑glycosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 36,172 | 0 | A | T | 8.1% | 474.3 / 27.2 | 160 | intergenic (+57/+26) | PP_0032/PP_0033 | hypothetical protein/undecaprenyl‑glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base A (82/65); new base T (5/8); total (87/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.53e-01 | |||||||||||
Only 100 of 162 total aligned reads displayed.
AGCGATGACTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGATGT > NC_002947/36026‑36320 | aGCGATGACTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAAc < 1:622401/150‑1 (MQ=255) gACTCGTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCt < 1:354601/150‑1 (MQ=255) aCTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGTACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGCtt < 1:887200/150‑1 (MQ=255) tctTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCtttt > 2:840037/1‑150 (MQ=255) ttCNGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCtttttt > 2:1499510/1‑150 (MQ=255) tCGGACCAGAACAAACAAGAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGCTTTTTtg < 2:1751903/150‑1 (MQ=255) acaaGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGCTTTTTtgtcga < 2:2431225/147‑4 (MQ=38) ccAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTgg > 2:1652168/1‑137 (MQ=255) ccAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTgg < 1:1652168/137‑1 (MQ=255) ccAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCtt < 1:2382429/150‑1 (MQ=255) ccAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATAAGGAGTAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCtt < 1:1969398/150‑1 (MQ=255) aGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTgg > 2:1709207/1‑150 (MQ=255) gAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGa > 2:2171389/1‑150 (MQ=255) gAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGa > 2:1430843/1‑150 (MQ=255) aacaaacaACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGaa < 2:1894206/150‑1 (MQ=255) aaacaaCAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAATCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAAttt > 1:47251/1‑150 (MQ=255) aacaacAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGTCTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTa < 2:1375881/150‑1 (MQ=255) aacaacAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGACGACAATTAATCGGCGGTAAAATAGGACTTCAAATGACGAAAGAAATCGAAAAAAAAGCCAGGGTAAAATCTGGCTTTTTTGTGCTTGGAAATTa > 2:124533/1‑150 (MQ=255) aacaaGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGcc > 2:429312/1‑150 (MQ=255) aacaaGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGcc > 2:829593/1‑150 (MQ=255) acaaGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCt > 1:512596/1‑150 (MQ=255) caaGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCtt > 2:2320281/1‑150 (MQ=255) gatctgCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTc < 1:1097998/145‑1 (MQ=255) aaGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTg < 2:2323109/122‑1 (MQ=255) tCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGtt > 1:1551958/1‑150 (MQ=255) cGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTc < 1:829593/150‑1 (MQ=255) tCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTg > 2:2025277/1‑150 (MQ=255) cAAGAGCAAAAGAAAGAAAGCAAGGATGGTTAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGc < 1:2403536/150‑1 (MQ=255) agagCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGa < 1:840037/150‑1 (MQ=255) agagCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACCTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGa < 2:915285/150‑1 (MQ=255) gagCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAg < 2:1022074/150‑1 (MQ=255) agCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAgg > 2:105763/1‑150 (MQ=255) agCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAgg < 1:1384874/150‑1 (MQ=255) gCAAAAGAAAGAAAGCAAGGATGTTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGc > 2:1185056/1‑150 (MQ=255) aaaaGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGt > 2:2250019/1‑150 (MQ=255) aaaaGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGt > 1:1315958/1‑150 (MQ=255) aaagaaagaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGtt > 1:2084502/1‑150 (MQ=255) gaaagaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTcc > 1:28031/1‑150 (MQ=255) gaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACACAAAAGCCAGGGTAACACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCAt < 1:1749437/150‑1 (MQ=255) aaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCAtt < 1:2258885/150‑1 (MQ=255) cAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCtt > 2:48563/1‑150 (MQ=255) aTGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTcc < 1:186522/150‑1 (MQ=255) tGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCg < 1:1185056/150‑1 (MQ=255) ggTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTtctc < 2:2194728/147‑1 (MQ=255) ggTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTtctc > 1:2194728/1‑147 (MQ=255) tAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTg > 1:1278790/1‑120 (MQ=255) gAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGAc > 1:806509/1‑150 (MQ=255) ccGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTc > 2:18533/1‑120 (MQ=255) ccGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTc < 1:18533/120‑1 (MQ=255) ccGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGc > 2:862237/1‑150 (MQ=255) ccGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGGAAAACCTGGCTGTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGc > 2:251357/1‑150 (MQ=255) cGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGCATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCa > 1:1844981/1‑150 (MQ=255) cGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCa > 1:1672068/1‑150 (MQ=255) gACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTtc < 2:742224/130‑1 (MQ=255) aaTTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCtt > 2:1812758/1‑150 (MQ=255) aaTTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCtt > 1:1010283/1‑150 (MQ=255) aaTCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCgg < 1:285616/128‑1 (MQ=255) tCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCgg < 2:2245965/150‑1 (MQ=255) ggcggTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGTGTAAAACCTGGCTTTTTTGTGCTTGGAAt > 2:1326011/1‑80 (MQ=255) ggcggTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAAt < 1:1326011/80‑1 (MQ=255) gcggTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGc < 2:1757028/101‑1 (MQ=255) ggTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGa < 1:2281137/96‑1 (MQ=255) ggTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCgg > 2:1349708/1‑149 (MQ=255) tAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTc < 2:345679/150‑1 (MQ=255) aaTAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCttt > 2:615797/1‑110 (MQ=255) aaTAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCttt < 1:615797/110‑1 (MQ=255) tAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAAt < 1:1709207/150‑1 (MQ=255) aGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTg < 1:1111497/103‑1 (MQ=255) aGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTg > 2:1111497/1‑103 (MQ=255) ggACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATgg > 2:2204268/1‑150 (MQ=255) gACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATg > 2:78951/1‑148 (MQ=255) gACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATg < 1:78951/148‑1 (MQ=255) aCTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTCTGCGGGGCGTTTCCAATGGcc > 1:201033/1‑149 (MQ=255) ttCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGcc < 1:436412/110‑1 (MQ=255) ttCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGcaca > 1:2296539/1‑150 (MQ=255) tCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCAcag < 2:28031/150‑1 (MQ=255) cAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCAcagc < 1:1720047/150‑1 (MQ=255) tGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGa < 1:2171389/150‑1 (MQ=255) gaaagaaaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgctg > 2:1986222/1‑150 (MQ=255) gaaagaaaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCATGCGTCTGGTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGCCGATTCCAATGGAGCAGCAGGAgctg > 1:1971358/1‑150 (MQ=255) gaaaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGCATAGATCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgctggctg > 1:1022773/1‑150 (MQ=255) aaaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCggg < 1:2350526/118‑1 (MQ=255) aaaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGctggctgg > 2:1572719/1‑150 (MQ=255) aaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCtggctggc < 2:806509/150‑1 (MQ=255) aagcaCAAAAAAGCCAGGTTTTACCCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCtt > 1:46449/5‑109 (MQ=37) aagcaCAAAAAAGCCAGGTTTTACCCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCtt < 2:46449/105‑1 (MQ=37) aaaaaaGCCAGGTTTTACCCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCggg > 1:1783185/1‑110 (MQ=38) aaaaaaGCCAGGTTTTACCCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGtt < 1:1893480/146‑1 (MQ=255) aaaaaaGCCAGGTTTTACCCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGtt < 1:1890701/146‑1 (MQ=255) aaaaaaGCCAGGTTTTACCCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGtt > 2:1890701/1‑146 (MQ=255) aaaaaGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCtt > 1:1172172/1‑150 (MQ=255) aaaaGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTc > 1:93322/1‑150 (MQ=255) cAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGAt < 2:2296539/150‑1 (MQ=255) aGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCGTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCATGTGCGCGTCGTTTCAAGTGGCGAAGCAGGAGCTGGTTGGCGTGCGCTGCGGTGagc > 2:724294/1‑148 (MQ=255) ggTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGca > 2:2135808/1‑114 (MQ=255) ggTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGca < 1:2135808/114‑1 (MQ=255) ggTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGca > 2:2140493/1‑114 (MQ=255) ggTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGtt < 1:7208/135‑1 (MQ=255) aaaaCCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGAtgt < 2:487354/150‑1 (MQ=255) aaaaCCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGAtgt < 1:1572719/150‑1 (MQ=255) | AGCGATGACTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGATGT > NC_002947/36026‑36320 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |