| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 308,575 | C→T | 5.8% | intergenic (+1589/‑281) | hslO → / → PP_0254 | molecular chaperone HslO/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 308,575 | 0 | C | T | 5.8% | 294.2 / 2.9 | 102 | intergenic (+1589/‑281) | hslO/PP_0254 | molecular chaperone HslO/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (45/50); new base T (5/2); total (50/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 102 total aligned reads displayed.
GTTGGCAAGCGCTTCAGCATCCCCACCACCCGTGCCGTGATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGCCATCAAGGCCGCTGGCCCGCAGCTGTAAGCCGAGCTCAGCCGC > NC_002947/308429‑308722 | gTTGGCAAGCGCTTCAGCATCCCCACCACCCGTGCCGTGATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTTCTCAAc < 2:1690021/150‑1 (MQ=255) ttGGCAAGCGCTTCAGCATCCCCACCACCCGTGCCGTGATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAAcc < 1:2307862/150‑1 (MQ=255) gCAAGCGCTTCAGCATCCCCACCACCCGTGCCGTGATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCcgc > 1:2080747/1‑150 (MQ=255) gCAAGCGCTTCAGCATCCCCACCACCCGTGCCGTGATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCcgc < 1:2292771/150‑1 (MQ=255) aaGCGCTTCAGCATCCCCACCACCCGTGCCGTGATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCgcgc > 1:1489035/1‑150 (MQ=255) cTTCAGCATCCCCACCACCCGTGCCGTGATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCaa > 2:2441757/1‑150 (MQ=255) ttCAGCATCCCCACCACCCGTGCCGTGATCGCTGCAATCCAGCGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAAc > 2:803274/1‑150 (MQ=255) ttCAGCATCCCCACCACCCGTGCCGTGATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAAc > 1:1071558/1‑150 (MQ=255) ttCAGCATCCCCACCACCCGTGCCGTGATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAAc < 1:982699/150‑1 (MQ=255) ttCAGCATCCCCACCACCCGTGCCGTGATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCAGTTCCGGCCGTTG‑GACCGG‑‑GACGGCTTAACCGGCGCGCCAAc > 2:1098374/1‑150 (MQ=255) cAGCATCCCCACCACCCGTGCCGTGATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTg < 1:2418205/150‑1 (MQ=255) gCATCCCCACCACCCGTGCCGTGATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTggg > 2:2408441/1‑150 (MQ=255) gCATCCCCACCACCCGTGCCGTGAGCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTggg > 1:1627873/1‑150 (MQ=255) ccccACCACCCGTGCCGTGATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGa < 1:538032/150‑1 (MQ=255) ccaccaCCCGTGCCGTGATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACa > 2:1298991/1‑150 (MQ=255) ccaccaCCCGTGCCGTGATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACa > 1:79384/1‑150 (MQ=255) accaccCGTGCCGTGATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACaaa < 2:1410744/150‑1 (MQ=255) accaccCGTGCCGTGATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACaaa > 1:2263295/1‑150 (MQ=255) ccccGTGCCGTGATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCg < 1:1098374/149‑1 (MQ=255) cccGTGCCGTGATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCgg < 2:2120313/150‑1 (MQ=255) ccgtgccgtgATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGc < 2:2080747/150‑1 (MQ=255) ccgcgccgtgATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGc < 1:2344493/150‑1 (MQ=255) cgtgccgtgATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGcc < 1:1734161/150‑1 (MQ=255) cgtgccgtgATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCAGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGcc < 2:2345278/150‑1 (MQ=255) gtgATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTacgac > 2:1490921/1‑150 (MQ=255) gATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTAcgacga < 2:1489035/150‑1 (MQ=255) gATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTAcgacga < 2:924657/150‑1 (MQ=255) gCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCt > 2:1070957/1‑150 (MQ=255) gCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCt < 2:921309/150‑1 (MQ=255) gCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGcc > 1:1585990/1‑150 (MQ=255) aTCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑CAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCaaa < 1:1268355/150‑1 (MQ=255) tCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCg < 1:489173/128‑1 (MQ=255) tCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCg > 2:489173/1‑128 (MQ=255) tCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAg < 1:260207/150‑1 (MQ=255) tCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAg < 2:1676385/150‑1 (MQ=255) ccAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAgg < 1:982485/150‑1 (MQ=255) cAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGt > 1:1361203/1‑150 (MQ=255) agagCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCt > 2:716588/1‑116 (MQ=255) agagCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCt < 1:716588/116‑1 (MQ=255) agCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTg < 2:1550998/150‑1 (MQ=255) gcACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTACCGAAGGACGTTCCGGGCGTTGCAAATGC‑‑AACCAGTTAA‑TCGACTAGTAAGTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCCAAGGTCTGGCCAAg > 1:543714/1‑150 (MQ=255) gcACTGGTCGGTGCCGAAACCGAGCAACTGGACATAATCAACCTGGACGTGCCGAAGGCTGTTCCGGGCGTTG‑AAAACGGTAAAAAATTTGGCCCCG‑‑CCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAg > 1:543673/1‑150 (MQ=255) cACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGc < 2:485904/150‑1 (MQ=255) aaCTGGTCGGTCCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGc < 2:618510/149‑1 (MQ=255) tGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGt > 1:1701917/1‑150 (MQ=255) ggTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTTAAcc > 2:1470756/1‑82 (MQ=255) ggTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTTAAcc < 1:1470756/82‑1 (MQ=255) ggTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATc < 1:2302029/150‑1 (MQ=255) ggTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATc < 2:2263295/150‑1 (MQ=255) ggTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATc < 1:2441757/150‑1 (MQ=255) tGCCGAAACCGAGCACCTGGACATCATCCCCCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCgg < 1:757103/107‑1 (MQ=255) tGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCgg > 2:757103/1‑107 (MQ=255) gAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAAc > 2:1932223/1‑150 (MQ=255) aaCCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACtt > 2:297799/1‑150 (MQ=255) ccGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGTCGGCGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCa < 1:1634629/150‑1 (MQ=255) cGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCaa > 1:2145513/1‑150 (MQ=255) ccTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTgg > 2:2136455/1‑119 (MQ=255) ccTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTgg < 1:2136455/119‑1 (MQ=255) cTGGACATCATCAACCTGGACGTGCCGAAGGCTCAGCCGTGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACCAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTc > 1:1774918/1‑150 (MQ=255) cTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGc < 1:1258623/107‑1 (MQ=255) cTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGc > 2:1258623/1‑107 (MQ=255) cTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTc > 2:555541/1‑150 (MQ=255) gACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGaa < 2:1627873/150‑1 (MQ=255) gACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGaa < 2:201827/150‑1 (MQ=255) gACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGaa < 1:1940621/150‑1 (MQ=255) atcatcAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGtt > 1:1282806/1‑150 (MQ=255) atcaACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTcc > 2:318964/1‑150 (MQ=255) atcaACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCAAAGTTTcc > 1:950610/1‑150 (MQ=255) ccTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AGACCG‑‑AACTGCTCGACCCGCGCGCCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACATCAAGAAGTTCGAAGTTTCCGACGc > 1:1547175/1‑150 (MQ=255) ccTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGc < 2:543673/150‑1 (MQ=255) ccTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGc > 1:2237343/1‑150 (MQ=255) ccTGGACGTACCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGc < 2:543714/150‑1 (MQ=255) gACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGCCATc < 2:607738/150‑1 (MQ=255) gACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGCCATc < 2:1833350/150‑1 (MQ=255) gTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGCCATCAAg < 1:1298991/150‑1 (MQ=255) cGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTTAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTg < 1:1712633/92‑1 (MQ=255) cGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTTAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTg > 2:1712633/1‑92 (MQ=255) gAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGCCATCAAGGCCGc > 1:305913/1‑150 (MQ=255) aaGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGCCATCAAGGCCGCt > 1:592992/1‑150 (MQ=255) aGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGCCATCAAGGCCGCTg < 2:1585990/150‑1 (MQ=255) aGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGCCATCAAGGCCGCTg < 1:214009/150‑1 (MQ=255) gCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCCTCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGCCATCAAGCCAGCTGGc > 2:913664/1‑150 (MQ=255) gCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGCCATCAAGGCCGCTGGc > 1:438277/1‑150 (MQ=255) cGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGCCATCAAGGCCGCTGGccc > 1:448550/1‑150 (MQ=255) ccGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGCCATCAAGGCCGCTGGCCCGCAg < 2:2237343/150‑1 (MQ=255) tG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGCCATCAAGGCCGCTGGCCCGCAGCTGTAAGc < 1:1070957/150‑1 (MQ=255) aaCCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTc < 2:554551/111‑1 (MQ=255) aaCCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTc > 1:554551/1‑111 (MQ=255) aaCCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGCCATCAAGGCCGCTGGCCCGCAGCTGTAAGCCGa > 1:2181943/1‑150 (MQ=255) aCCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTc < 2:1056421/110‑1 (MQ=255) aCCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTc > 1:1056421/1‑110 (MQ=255) aCCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGCCATCAAGGc < 2:2353316/125‑1 (MQ=255) aCCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGCCATCAAGGc > 1:2353316/1‑125 (MQ=255) aCCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGCCATCAAGGCCGCTGGCCCGCAGCTGTAAGCCGAg > 1:2363300/1‑150 (MQ=255) g‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGCCATCAAGGCCGCTGGCCCGCAGCTGTAAGCCGa < 2:1568337/146‑1 (MQ=255) g‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGCCATCAAGGCCGCTGGCCCGCAGCTGTAAGCCGa > 1:1568337/1‑146 (MQ=255) aCTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCTGAAGCTATCAATGCCGCTGGCCCGCCGCTGTAAGCCGAGCTCAg > 2:564547/1‑150 (MQ=255) cTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGCCATCAAGGCCGCTGGCCCGCAGCTGTaa > 1:735837/1‑135 (MQ=255) cTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGCCATCAAGGCCGCTGGCCCGCAGCTGTaa < 2:735837/135‑1 (MQ=255) cTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGCCATCAAGGCCGCTGGCCCGCAGCTGTAAGCCGAGCTCAGCCGc > 1:859632/1‑150 (MQ=255) | GTTGGCAAGCGCTTCAGCATCCCCACCACCCGTGCCGTGATCGCTGCAATCCAGAGCGGCGCACTGGTCGGTGCCGAAACCGAGCACCTGGACATCATCAACCTGGACGTGCCGAAGGCCGTTCCGGGCGTTG‑AAACCG‑‑AACTGCTCAACCCGCGCACCAACTGGGCTGACAAAGCGGCCTACGACGAGGCTGCCAAAGGTCTGGCCAAGCTGTTCATCGAAAACTTCAAGAAGTTCGAAGTTTCCGACGCCATCAAGGCCGCTGGCCCGCAGCTGTAAGCCGAGCTCAGCCGC > NC_002947/308429‑308722 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |