| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,473,762 | A→T | 5.0% | L130Q (CTG→CAG) | PP_3086 ← | RNA polymerase sigma‑70 factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,473,762 | 0 | A | T | 5.0% | 321.4 / 5.5 | 99 | L130Q (CTG→CAG) | PP_3086 | RNA polymerase sigma‑70 factor |
| Reads supporting (aligned to +/- strand): ref base A (53/41); new base T (3/2); total (56/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
CCCAGGATCAGCGGGTCAATGCGCTGCACCATCACTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATGGGCGATGGCCTCCAGGTAGGCCCGCTCGACAT > NC_002947/3473613‑3473909 | cccAGGATCAGCGGGTCAATGCGCTGCACCATCACTCGATGCTCAGGCAGGTAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGAcagca < 1:814407/150‑1 (MQ=255)cccAGGATCAGCGGGTCAATGCGCTGCACCATCACTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGAcagca > 1:2108017/1‑150 (MQ=255) ggATCAGCGGGTCAATGCGCTGCACCATCACTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGaa < 1:1956371/150‑1 (MQ=255) gATCAGCGGGTCAATGCGCTGCACCATCACTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAac > 1:780923/1‑150 (MQ=255) gATCAGCGGGTCAATGCGCTGCACCATCACTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAac > 2:2146498/1‑150 (MQ=255) tCAGCGGGTCAATGCGCTGCACCATCACTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAacac < 1:1199963/150‑1 (MQ=255) atgcacAATGCGCTGCACCATCACTCGAGGCTCAGGCAGGCAAGTTATGCCTTACGCATGTCGCGCTTGATCGTGATCAGCTAAANCTGCAGNTGTTCGGNGATTNGGGCGTAGGTCAGGNCGTCCAGCTGTGACAGCAGGAACACCTGa < 1:509876/145‑1 (MQ=255) cAATGCGCTGCACCATCACTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTAc > 1:678896/1‑150 (MQ=255) tGCACCATCACTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGa > 2:1111326/1‑137 (MQ=255) tGCACCATCACTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGa < 1:1111326/137‑1 (MQ=255) gCACCATCACTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCgg < 1:1811907/150‑1 (MQ=255) aCCATCACTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGAAGGAAAACCTGACGTACCAGCGCCGTCa > 2:1960220/1‑150 (MQ=255) cATCACTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATg > 1:1794001/1‑150 (MQ=255) cATCACTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGCGACAGCAGGAACACCTGACGTACCCGCGCCGGCATg > 1:1128765/1‑150 (MQ=255) aTCACTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCt < 2:2252272/129‑1 (MQ=255) aTCACTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCt > 1:2252272/1‑129 (MQ=255) aTCACTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGt > 2:2235365/1‑150 (MQ=255) aTCACTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGt > 2:2391394/1‑150 (MQ=255) aCTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTcgc > 2:2328082/1‑150 (MQ=255) aCTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCGGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTcgc > 1:242298/1‑150 (MQ=255) cTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTa < 2:1770265/131‑1 (MQ=255) cTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTa > 1:1770265/1‑131 (MQ=255) cTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTcgcg > 1:2129572/1‑150 (MQ=255) cTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTcgcg > 2:621125/1‑150 (MQ=255) cGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCgca < 1:2146498/150‑1 (MQ=255) aTGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCgcagc > 1:1676871/1‑150 (MQ=255) ggcaggcaAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGt > 1:2174058/1‑150 (MQ=255) caAGGAATGCCGTACGCATGTCGCGCTTGATCGTGAACAGCGAAAACTGCAGCTGTTCGGAGAAGTGGGAGTAGATCAGGACGTACAGCTGAGACAGCAGGAGCACCTGACGTACGCGCGCCGGCATGTCGGGCGGCATGGCGTCGATGc > 2:520146/1‑150 (MQ=255) aaggCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTAccc < 1:257174/109‑1 (MQ=255) aaTGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTAccc > 2:257174/1‑112 (MQ=255) ccGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAggg < 2:2174058/150‑1 (MQ=255) gTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGtt > 2:705154/1‑150 (MQ=255) gTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGACTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGtt < 2:2277022/150‑1 (MQ=255) tACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGGTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGttt < 1:509214/150‑1 (MQ=255) aCGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTc < 1:1590227/150‑1 (MQ=255) gCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCaa < 2:383461/150‑1 (MQ=255) gCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCaa < 1:528211/150‑1 (MQ=255) gTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGAt < 2:481550/150‑1 (MQ=255) tCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATc > 2:384989/1‑150 (MQ=255) gcgcTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATcag > 1:1071536/1‑150 (MQ=255) ttGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATcagccag < 2:2293762/150‑1 (MQ=255) ttGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATcagccag < 2:1676871/150‑1 (MQ=255) tCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCaa > 2:2392813/1‑135 (MQ=255) tCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCaa < 1:2392813/135‑1 (MQ=255) cGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCgcgc > 2:2281206/1‑90 (MQ=255) cGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCgcgc < 1:2281206/90‑1 (MQ=255) gTGATCAGCGAAGCCTGCAGCGGTTCGGCGATTTGGGCGTCGGTCAGGCCGTCCAGCTGTGACCGCAGGAACACCTGACGTACAGGCGCCAGCCTGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGtt < 2:577099/150‑1 (MQ=255) gTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGtt < 2:139784/150‑1 (MQ=255) gATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTc > 2:1154768/1‑150 (MQ=255) gATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTc > 2:1610458/1‑150 (MQ=255) cAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCgg > 1:2341965/1‑150 (MQ=255) aGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGc > 2:354278/1‑150 (MQ=255) gCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCgg > 1:1659207/1‑148 (MQ=255) gCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCgg < 2:1659207/148‑1 (MQ=255) cGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGa > 2:880897/1‑150 (MQ=255) gAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGaa < 2:68539/150‑1 (MQ=255) gAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGaa < 2:68550/150‑1 (MQ=255) gAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGCCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGaa < 1:1118116/150‑1 (MQ=255) aaaCCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAg > 1:1694174/1‑150 (MQ=255) aaCCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAgg < 1:1246138/150‑1 (MQ=255) gCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCgg < 2:2129572/150‑1 (MQ=255) cTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCggg > 2:1877708/1‑150 (MQ=255) ttCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTg > 1:749146/1‑150 (MQ=255) ttCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTg > 2:265472/1‑150 (MQ=255) cGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCg < 1:996487/150‑1 (MQ=255) gtacgtttGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCgg > 1:683929/6‑150 (MQ=255) ggCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCgg > 2:486917/1‑150 (MQ=255) gCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGc > 2:58194/1‑150 (MQ=255) gATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGCTGCGGcca > 1:491842/1‑148 (MQ=255) tGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATgg < 1:1610458/150‑1 (MQ=255) tGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATgg < 1:1877708/150‑1 (MQ=255) gggCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATggg > 2:1587112/1‑150 (MQ=255) gTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACa < 1:55768/86‑1 (MQ=255) gTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACa > 2:55768/1‑86 (MQ=255) gTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGTCACCTCGGGTTGCGGCAAATGGGCGAt < 2:1414840/150‑1 (MQ=255) gTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATGGGCGAt < 1:2350419/150‑1 (MQ=255) ggTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATGGGCGATGGc < 1:67474/150‑1 (MQ=255) ggTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATGGGCGATGGc > 2:67474/1‑150 (MQ=255) gTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACTTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATGGGCGATGGcc > 2:633450/1‑150 (MQ=255) gTCAGGCCGGCCAGCTGTGACAGCAGGAACACCTGACGTGGCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGGGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATGGGCGATGGcc < 2:242298/150‑1 (MQ=255) tCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACATGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATGGGCGATGGCCt > 1:1547517/1‑150 (MQ=255) tCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATGGGCGATGGCCt > 2:2282486/1‑150 (MQ=255) tCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATGGGCGATGGCCt > 2:858302/1‑150 (MQ=255) ggCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATGGGCGATGGCCTCCa > 1:1458404/1‑150 (MQ=255) gCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATGGGCGATGGCCTCCAg < 2:2108017/150‑1 (MQ=255) ttcctgCTGTCACAGCTGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGc > 2:1136310/6‑124 (MQ=255) ttcctgCTGTCACAGCTGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGc < 1:1136310/119‑1 (MQ=255) ttcatgCTGTCACAGCTGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATGGGCGATGGCCTCCAGGTa > 1:220950/6‑150 (MQ=255) tCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATGGGCGATg < 1:950669/138‑1 (MQ=255) tCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATGGGCGATg > 2:950669/1‑138 (MQ=255) tCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATGGGAGATGGCCTCCAGGTAg > 2:1217198/1‑150 (MQ=255) cctgCTGTCACAGCTGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATGGGCGATGGCCTCCAGGTAgg > 2:393023/4‑150 (MQ=255) aGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATGGGCGATGGCTTCCAGGTAGGcc < 2:1404277/150‑1 (MQ=255) tgACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATGGGCGATGGCCTCCAGGTAGGCCCGCTc > 1:614011/1‑150 (MQ=255) aCAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATGGGCGATGGCCTCCAGGTAGGCCCGCTCGa > 1:227377/1‑150 (MQ=255) agcagGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTc > 2:2230458/1‑104 (MQ=255) agcagGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTc < 1:2230458/104‑1 (MQ=255) agcagGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATGGGCGAt < 1:921996/125‑1 (MQ=255) agcagGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATGGGCGAt > 2:921996/1‑125 (MQ=255) gcagGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATGGGCGATGGCCTCCAGGTAGGCCCGCTCGACAt > 1:1959104/1‑150 (MQ=255) | CCCAGGATCAGCGGGTCAATGCGCTGCACCATCACTCGATGCTCAGGCAGGCAAGGAATGCCGTACGCATGTCGCGCTTGATCGTGATCAGCGAAACCTGCAGCTGTTCGGCGATTTGGGCGTAGGTCAGGCCGTCCAGCTGTGACAGCAGGAACACCTGACGTACCCGCGCCGGCATGTCGCGCAGCATGGCGTCGATGCGGTACAGGGTTTCAAGGATCAGCCAGCGCGTTTCCGGCGAAGGCACCTCGGGTTGCGGCAAATGGGCGATGGCCTCCAGGTAGGCCCGCTCGACAT > NC_002947/3473613‑3473909 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |