Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,612,797 G→A 5.0% P310P (CCC→CCT)  mcoA ← Mn(II) copper oxidase A

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,612,7970GA 5.0% 239.0 / 2.2 79P310P (CCC→CCT) mcoAMn(II) copper oxidase A
Reads supporting (aligned to +/- strand):  ref base G (35/40);  new base A (2/2);  total (37/42)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.96e-01

GCCGTCGCTTTCGGCCGGGGAGTGGCCGTTGTGCTCGTGGGTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCGGAGGTCTGGTAGTACAGGCCTCCCGGGGCGAATTCACC  >  NC_002947/3612650‑3612946
                                                                                                                                                   |                                                                                                                                                     
gCCGTCGCTTTCGGCCGGGGAGTGGCCGTTGTGCTCGTGGGTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTggg                                                                                                                                                     >  1:692454/1‑150 (MQ=255)
   gTCGCTTTCGGCCGGGGAGTGGCCGTTGTGCTCGTGGGTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCgg                                                                                                                                                  <  1:2325157/150‑1 (MQ=255)
        tttCGGCCGGGGAGTGGCCGTTGTGCTCGTGGGTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAg                                                                                                                                             <  1:263235/150‑1 (MQ=255)
        tttCGGCCGGGGAGTGGCCGTTGTGCTCGTGGGTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAg                                                                                                                                             >  1:629208/1‑150 (MQ=255)
         ttCGGCCGGGGAGTGGCCGTTGTGCTCGTGGGTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGt                                                                                                                                            <  2:1613807/150‑1 (MQ=255)
                  ggAGTGGCCGTTGTGCTCGTGGGTCGAAATGGTATGCAGGCCAAAGCCCCCGTTCGCTGAGGGGTCAATTGGCAGGGAATTGTAATGGCGCATCAGGATCGCCGCTCCGGAGCGTACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGaa                                                                                                                                   <  1:1863700/150‑1 (MQ=255)
                   gAGTGGCCGTTGTGCTCGTGGGTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAg                                                                                                                                  <  2:1619237/150‑1 (MQ=255)
                      tGGCCGTTGTGCTCGTGGGTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTc                                                                                                                               <  2:1586860/150‑1 (MQ=255)
                      tGGCCGTTGTGCTCGTGGGTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTc                                                                                                                               >  2:1366616/1‑150 (MQ=255)
                          cGTTGTGCTCGTGGGTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCcaca                                                                                                                           >  1:730268/1‑150 (MQ=255)
                          cGTTGTGCTCGTGGGTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCcaca                                                                                                                           >  1:51267/1‑150 (MQ=255)
                          cGTTGTGCTCGTGGGTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTAGGCGGGAAAGTGCCGTCGAAGGTCcaca                                                                                                                           <  1:772919/150‑1 (MQ=255)
                          cGTTGTGCTCGTGGGTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTAGGCGGGAAAGTGCCGTCGAAGGTCcaca                                                                                                                           <  1:772388/150‑1 (MQ=255)
                          cGTTGTGCTCGTGGGTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTAGGCGGGAAAGTGCCGTCGAAGGTCcaca                                                                                                                           >  2:772388/1‑150 (MQ=255)
                          cGTTGTGCTCGTGGGTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTAGGCGGGAAAGTGCCGTCGAAGGTCcaca                                                                                                                           >  2:772919/1‑150 (MQ=255)
                           gTTGTGCTCGTGGGTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCACTTGGCAGGGCGTTGTAATTGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGaaa                                                                                                                                              >  2:1160064/1‑130 (MQ=255)
                           gTTGTGCTCGTGGGTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATTGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGaaa                                                                                                                                              <  1:1160064/130‑1 (MQ=255)
                            ttGTGCTCGTGGGTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCGTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGc                                                                                                                         >  1:380408/1‑150 (MQ=255)
                                   cGTGGGTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTtgt                                                                                                                  <  2:692454/150‑1 (MQ=255)
                                    gTGGGTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTtgtg                                                                                                                 >  2:460404/1‑150 (MQ=255)
                                    gTGGGTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTtgtg                                                                                                                 <  2:629208/150‑1 (MQ=255)
                                    gTGGGTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTtgtg                                                                                                                 <  1:546317/150‑1 (MQ=255)
                                       ggTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGtt                                                                                                              <  1:1896538/150‑1 (MQ=255)
                                        gTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGNGTCAATNGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGttt                                                                                                             >  1:1977157/1‑150 (MQ=255)
                                         tCGNAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCTGTCGTGGGTCCACAGCGATTTGTGGtttt                                                                                                            >  2:1495743/1‑150 (MQ=255)
                                                ggTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCgg                                                                                                     <  1:377116/150‑1 (MQ=255)
                                                         gCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCgg                                                                                            >  1:2096513/1‑150 (MQ=255)
                                                           cAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGAt                                                                                          <  2:2011477/150‑1 (MQ=255)
                                                               gCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGaa                                                                                      <  2:730268/150‑1 (MQ=255)
                                                               gCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTCTTGCAGCGGCATGTTCGGATGGaa                                                                                      >  2:2031782/1‑150 (MQ=255)
                                                                ccACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAg                                                                                     >  2:2195684/1‑150 (MQ=255)
                                                                 cACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGc                                                                                    >  1:967329/1‑150 (MQ=255)
                                                                           cGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGAt                                                                          >  2:192243/1‑150 (MQ=255)
                                                                               gggTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGAttt                                                                                                                    >  2:1825452/1‑104 (MQ=255)
                                                                               gggTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGAttt                                                                                                                    <  1:1825452/104‑1 (MQ=255)
                                                                                 gTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCtt                                                                    >  2:878057/1‑150 (MQ=255)
                                                                                 gTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCtt                                                                    >  1:881434/1‑150 (MQ=255)
                                                                                 gTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCtt                                                                    <  1:1532796/150‑1 (MQ=255)
                                                                                     aTTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTtggtg                                                                <  1:878057/150‑1 (MQ=255)
                                                                                     aTTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTtggtg                                                                <  1:192243/150‑1 (MQ=255)
                                                                                       tGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTGCGGATGGAAGCGTGTGTCGATGCCCTTggtggt                                                              <  1:460404/150‑1 (MQ=255)
                                                                                       tGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCCGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTggtggt                                                              <  2:1150706/150‑1 (MQ=255)
                                                                                            gggCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCa                                                         <  2:1977222/150‑1 (MQ=255)
                                                                                             ggCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAg                                                        >  1:2328009/1‑150 (MQ=255)
                                                                                                gTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGt                                                     <  2:2096513/150‑1 (MQ=255)
                                                                                                 ttGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTg                                                    >  2:2270470/1‑150 (MQ=255)
                                                                                                 ttGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTg                                                    <  1:49715/150‑1 (MQ=255)
                                                                                                    tAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTc                                                 <  2:967329/150‑1 (MQ=255)
                                                                                                      aTGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCgg                                               <  2:881434/150‑1 (MQ=255)
                                                                                                       tGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCgt                                                                                  >  2:2235935/1‑114 (MQ=255)
                                                                                                       tGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCgt                                                                                  <  1:2235935/114‑1 (MQ=255)
                                                                                                         gcgcATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAAt                                            >  1:1221934/1‑150 (MQ=255)
                                                                                                             aTCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGCTGCCCTTGGGGGTGCCCAGCGTGGTCGGAATGTCg                                        >  2:2133828/1‑150 (MQ=255)
                                                                                                               cAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCGGa                                      <  1:2195684/150‑1 (MQ=255)
                                                                                                               cAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGGCGGAATGTCGGa                                      >  1:490568/1‑150 (MQ=255)
                                                                                                                aGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCGGAg                                     <  2:2256074/150‑1 (MQ=255)
                                                                                                                    tCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCGGAGGTCt                                 >  1:2329183/1‑150 (MQ=255)
                                                                                                                    tCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCGGAGGTCt                                 >  1:2328954/1‑150 (MQ=255)
                                                                                                                    tCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCGGAGGTCt                                 <  1:1083908/150‑1 (MQ=255)
                                                                                                                     cGGCTGGCCGTGGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCGGAGGTCTg                                <  2:651195/150‑1 (MQ=255)
                                                                                                                      ggCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCGGAGGTCTgg                               <  2:490568/150‑1 (MQ=255)
                                                                                                                       gCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTtgg                                                                  >  2:1870161/1‑114 (MQ=255)
                                                                                                                       gCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTtgg                                                                  <  1:1870161/114‑1 (MQ=255)
                                                                                                                         tGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCg                                        <  1:435991/138‑1 (MQ=255)
                                                                                                                         tGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCg                                        >  2:435991/1‑138 (MQ=255)
                                                                                                                         tGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCGGAGGTCTGgtag                            >  1:567901/1‑150 (MQ=255)
                                                                                                                           gCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCGGAGGTCTGgtagta                          >  2:1469755/1‑150 (MQ=255)
                                                                                                                               tAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGCATGTCGGAGGTCTGGTAGTACCgg                      >  1:529956/1‑150 (MQ=255)
                                                                                                                                 gcgcACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGCAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCGGAGGTCTGGTAGTACAGGcc                    >  2:1049641/1‑150 (MQ=255)
                                                                                                                                      ccATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCGGAGGTCTGGTAGTACAg                       <  2:2430181/142‑1 (MQ=255)
                                                                                                                                      ccATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCGGAGGTCTGGTAGTACAg                       <  2:1234641/142‑1 (MQ=255)
                                                                                                                                      ccATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCGGAGGTCTGGTAGTACAg                       >  1:2430181/1‑142 (MQ=255)
                                                                                                                                      ccATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCGGAGGTCTGGTAGTACAg                       >  1:1234641/1‑142 (MQ=255)
                                                                                                                                         tCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCGGa                                      <  2:419681/124‑1 (MQ=255)
                                                                                                                                         tCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCGGa                                      >  1:419681/1‑124 (MQ=255)
                                                                                                                                            gcagcTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGc                                                                        <  1:505062/87‑1 (MQ=255)
                                                                                                                                            gcagcTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGc                                                                        >  2:505062/1‑87 (MQ=255)
                                                                                                                                             gagcTGGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCGGAGGTCTGGTAGTACAGGCCTCCCGGGGCGaa        <  1:306195/149‑1 (MQ=255)
                                                                                                                                             cagcTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCGGAGGTCTGGTAGTACAGGCCTCCCGGGGCGaa        <  2:2128253/150‑1 (MQ=255)
                                                                                                                                                 ttGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTCTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCGGAGGTCTGGTAGTACAGGCCTCCCGGGGCGAATTCa    <  1:2031782/150‑1 (MQ=255)
                                                                                                                                                   gggCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCGGAGGTCTGGTAGTACAGGCCTCCCGGGGCGAATTCAcc  >  2:1631715/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
GCCGTCGCTTTCGGCCGGGGAGTGGCCGTTGTGCTCGTGGGTCGAAATGGTATGCAGGCCAAAGCCACCGTTGGCCGAGGGGTCAATTGGCAGGGCGTTGTAATGGCGCATCAGGATCGGCTGGCCGTAGCGCACCATCAGCAGCTTGGGCGGGAAAGTGCCGTCGAAGGTCCACAGCGATTTGTGGTTTTGCAGCGGCATGTTCGGATGGAAGCGTGTGTCGATGCCCTTGGTGGTGCCCAGCGTGGTCGGAATGTCGGAGGTCTGGTAGTACAGGCCTCCCGGGGCGAATTCACC  >  NC_002947/3612650‑3612946

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑