| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,628,125 | C→G | 7.4% | intergenic (+11/‑129) | PP_3198 → / → PP_3199 | 2Fe‑2S ferredoxin/monooxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,628,125 | 0 | C | G | 7.4% | 338.7 / 15.6 | 108 | intergenic (+11/‑129) | PP_3198/PP_3199 | 2Fe‑2S ferredoxin/monooxygenase |
| Reads supporting (aligned to +/- strand): ref base C (50/50); new base G (4/4); total (54/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.52e-01 | |||||||||||
Only 100 of 115 total aligned reads displayed.
GCCCACGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACTGTGAACAACGTG > NC_002947/3627980‑3628274 | gCCGACGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTTTTGCCGCTTGAGCAGCTCGATCGCTGACCTATcgcgccgcgc < 1:891293/150‑1 (MQ=255)gCCCACGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATcgcgccgcgc > 1:911959/1‑150 (MQ=255) ccACGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGa > 2:2409566/1‑150 (MQ=255) ccACGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGa > 2:2264824/1‑150 (MQ=255) ccACGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGa > 2:1798682/1‑150 (MQ=255) cACGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGAt > 2:506495/1‑150 (MQ=255) cGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCGGCGCGATAg < 1:792499/150‑1 (MQ=255) gcgcgcgcTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCGGCGCGATAGGt < 2:2423203/150‑1 (MQ=255) cgcgcgcTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTc < 1:702357/150‑1 (MQ=255) ttCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGATGCACTCGATCCCAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTTACCTATCGCGCCGCGCGATAGGTCGCATccc > 1:652506/1‑150 (MQ=255) ttCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATccc > 1:2179765/1‑150 (MQ=255) ttCACGCCCGAAGACGGCACTTGCGTTCACGGCCACGGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATccc > 1:1380400/1‑150 (MQ=255) gCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCcgcgac > 1:248793/1‑150 (MQ=255) ccGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCcgcgacgc > 1:296947/1‑150 (MQ=255) ccGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCcgcgacgc > 1:246651/1‑150 (MQ=255) cGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCcgcgacgcg > 2:2074491/1‑150 (MQ=255) aGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCACCGCGCGATAGGTCGCATCCCGCGACGCGAtt < 2:1788778/150‑1 (MQ=255) gACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTg < 2:1982804/150‑1 (MQ=255) cACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCAt < 1:2109439/150‑1 (MQ=255) cACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCAt < 1:1582430/150‑1 (MQ=255) aCTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATg < 1:26058/150‑1 (MQ=255) ttGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATg > 2:784258/1‑148 (MQ=255) cGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCg < 1:2409566/150‑1 (MQ=255) ttCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGgc > 1:497699/1‑150 (MQ=255) ttCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGgc < 2:1269057/150‑1 (MQ=255) aCGGCCCCTGCCGAGGCGCAGCCTTGGCGGCACTCTGTCACAAGGAAGCGTGCTGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCa < 2:2091601/150‑1 (MQ=255) aCGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCa > 2:950357/1‑150 (MQ=255) cccTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGAt > 2:1516798/1‑127 (MQ=255) cccTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGAt < 1:1516798/127‑1 (MQ=255) cccTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCgg > 2:1163203/1‑150 (MQ=255) cccTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCgg > 1:1888386/1‑150 (MQ=255) cTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGa > 1:1639865/1‑135 (MQ=255) cTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGa < 2:1639865/135‑1 (MQ=255) tGCNGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGaa > 2:1517818/1‑150 (MQ=255) aGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCtgt < 2:2179765/150‑1 (MQ=255) aGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTCGTCATGGACCGGCGCAGGCGGGAAGCtgt < 1:1883757/150‑1 (MQ=255) gCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGc > 2:908809/1‑150 (MQ=255) gCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGc > 2:223341/1‑150 (MQ=255) ccTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCGCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGcctatgc > 2:1253570/1‑144 (MQ=255) tttgAGGCACTAGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGcac > 1:1265363/4‑150 (MQ=255) ggAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAg < 2:940562/150‑1 (MQ=255) gCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCCTATGCACAgcttc < 1:1253570/150‑5 (MQ=255) cTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACgg < 2:246651/150‑1 (MQ=255) aTCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGgccgc < 2:1218994/150‑1 (MQ=255) acaAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGcccc > 1:2309297/1‑150 (MQ=255) caAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCg > 2:2107020/1‑150 (MQ=255) aaGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGc > 2:2098447/1‑150 (MQ=255) ggAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCAt < 1:2107020/150‑1 (MQ=255) gAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCcgcgac < 1:1435303/83‑1 (MQ=255) gAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCcgcgac > 2:1435303/1‑83 (MQ=255) gAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCa > 1:1908647/1‑94 (MQ=255) gAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCa < 2:1908647/94‑1 (MQ=255) ggcggcTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACgggg < 2:617277/150‑1 (MQ=255) ggcggcTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACgggg < 1:313029/150‑1 (MQ=255) ggcggcTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCACAGGCACAGGAAACGGCCGCCCCGCATGACgggg < 1:2264824/150‑1 (MQ=255) gcggcTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGgc > 1:1150226/1‑150 (MQ=255) ggctgCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCacaa < 1:1913004/150‑1 (MQ=255) ctgctATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGa > 1:1086960/1‑50 (MQ=255) ctgctATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGa < 2:1086960/50‑1 (MQ=255) tgctATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCAcaacaa > 1:892253/1‑150 (MQ=255) tgctATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCAcaacaa < 1:1714193/150‑1 (MQ=255) tgctATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCAGCCCCGCATGACGGGGCGCAcaacaa < 1:1517818/150‑1 (MQ=255) gctATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGt > 1:995181/1‑53 (MQ=255) ctATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGa < 2:1380400/150‑1 (MQ=255) gCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACaaa < 1:1195472/150‑1 (MQ=255) ccGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACgg < 2:2436580/114‑1 (MQ=255) ccGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACaaaa < 1:950357/150‑1 (MQ=255) ccGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACaaaa > 2:1733844/1‑150 (MQ=255) gCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACAAAACg > 1:1104205/1‑150 (MQ=255) cTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGAGGTGGCGATGATCCCGGTACTCGATTGGTCATGGACCTGCTCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACAAAACGt < 1:1739867/150‑1 (MQ=255) ttGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGt < 2:1702825/42‑1 (MQ=255) ttGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGt > 1:1702825/1‑42 (MQ=255) gcagcTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACAAAACGTGAGAc > 1:156074/1‑150 (MQ=255) gcagcTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACAAAACGTGAGAc > 2:2190360/1‑150 (MQ=255) gATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGgc < 2:2102613/64‑1 (MQ=255) gATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGgc > 1:2102613/1‑64 (MQ=255) gATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCAt > 1:1662613/1‑150 (MQ=255) cGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGaa < 1:1163203/150‑1 (MQ=255) cGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGaa < 2:2309297/150‑1 (MQ=255) gCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATg < 1:1891891/53‑1 (MQ=255) gCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATg > 2:1891891/1‑53 (MQ=255) cTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCa > 1:1803983/1‑50 (MQ=255) cTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCa < 2:1803983/50‑1 (MQ=255) cTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATa > 1:1989183/1‑150 (MQ=255) aCCTATCGCGCGGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACtg > 1:380089/1‑150 (MQ=255) aCCTATCGCGCGGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACtg > 1:983061/1‑150 (MQ=255) aCCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGAGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACtg > 1:589765/1‑150 (MQ=255) ccTATCGCGCGGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGaa < 2:1391417/121‑1 (MQ=255) ccTATCGCGCGGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGaa > 1:1391417/1‑121 (MQ=255) ccTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACtgt < 1:506495/150‑1 (MQ=255) ccTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCAGAAAACGAGAACAAAACGTGAGACATGCCATGAATACtgt > 1:723209/1‑150 (MQ=255) ctcacgcgccgcgcGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATa < 1:701491/141‑1 (MQ=255) cTATCGCGCGGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACtgtg > 2:1789105/1‑150 (MQ=255) cTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATa > 2:701491/1‑145 (MQ=255) aTCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACTGTGaa < 2:1265363/150‑1 (MQ=255) tCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACAAAACGTga < 2:455598/127‑1 (MQ=255) gcgccgcgcGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGaa > 2:1531358/1‑115 (MQ=255) gcgccgcgcGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGaa < 1:1531358/115‑1 (MQ=255) gccgcgcGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACTGTGAACAACg < 2:1571727/150‑1 (MQ=255) cgcgcgATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACTGTGAACAACgtg < 2:296947/150‑1 (MQ=255) | GCCCACGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGCATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACTGTGAACAACGTG > NC_002947/3627980‑3628274 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |