Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,796,469 T→C 12.6% T10A (ACC→GCC) ‡ fcs ← feruloyl‑CoA‑synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,796,4690TC12.6% 214.1 / 18.8 88T10A (ACC→GCC) ‡fcsferuloyl‑CoA‑synthetase
Reads supporting (aligned to +/- strand):  ref base T (41/35);  new base C (6/5);  total (47/41)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.37e-01

CAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGGCTAGATGGGATAGTGACGCGGGCCGTGCTGG  >  NC_002947/3796321‑3796618
                                                                                                                                                     |                                                                                                                                                     
cAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGggtcggtc                                                                                                                                                      >  2:2062042/1‑150 (MQ=255)
 aaTGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGgtcggtcg                                                                                                                                                     >  1:1715793/1‑150 (MQ=255)
 aaTGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGgtcggtcg                                                                                                                                                     >  2:1550516/1‑150 (MQ=255)
   tGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGAc                                                                                                                                                   <  1:2358428/150‑1 (MQ=255)
    gCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGAcc                                                                                                                                                  <  2:564030/150‑1 (MQ=255)
        cAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGACCGACCNTgg                                                                                                                                              <  2:1504200/150‑2 (MQ=255)
        cAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGCTGGCCAGGGTCGACCGACCCTgg                                                                                                                                              <  2:1192705/150‑2 (MQ=255)
            cgcTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCgg                                                                                                                                          <  1:1550516/150‑1 (MQ=255)
             gcTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCggg                                                                                                                                         >  2:1686381/1‑150 (MQ=255)
             gcTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGGTTGCATGCGCAGAACAAAGGTGGCGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCggg                                                                                                                                         >  2:324770/1‑150 (MQ=255)
              cTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGc                                                                                                                                        <  1:1832101/150‑1 (MQ=255)
               tCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCt                                                                                                                                       >  1:598746/1‑150 (MQ=255)
               tCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCt                                                                                                                                       <  2:598746/150‑1 (MQ=255)
                   gCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGt                                                                                                                                   <  1:656588/150‑1 (MQ=255)
                        cgcgcCGGCAGCGGCGCCAGTGGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGCCCCTGAGAGGGCTTAGTTATTc                                                                                                                              <  2:634842/150‑1 (MQ=255)
                        cgcgcCGGCAGCGGCGCCAGTGGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTc                                                                                                                              <  2:1854381/150‑1 (MQ=255)
                         gctccGGCAGCGGCGCCAGTGGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCa                                                                                                                             >  1:1282235/4‑150 (MQ=255)
                          cgcCGGCAGCGGCGCCAGTGGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCAc                                                                                                                            <  1:269969/150‑1 (MQ=255)
                             cGGCAGCGGCGCCAGTGGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCa                                                                                                                         >  2:546592/1‑150 (MQ=255)
                                     gcgcCAGTGGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTc                                                                                                                 <  1:272995/150‑1 (MQ=255)
                                        ccAGTGGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCctt                                                                                                              >  1:618588/1‑150 (MQ=255)
                                              gCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCgg                                                                                                                                          <  1:952873/116‑1 (MQ=255)
                                              gCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCgg                                                                                                                                          >  2:952873/1‑116 (MQ=255)
                                              gCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCg                                                                                                                                           >  1:983677/1‑115 (MQ=255)
                                              gCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCg                                                                                                                                           <  2:983677/115‑1 (MQ=255)
                                                 cGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCcttgttctngtt                                                                                                     <  2:1507719/150‑1 (MQ=255)
                                                  gACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAg                                                                                                                        >  2:740158/1‑130 (MQ=255)
                                                  gACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAg                                                                                                                        <  1:740158/130‑1 (MQ=255)
                                                   aCAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTtgttgt                                                                                                   >  2:2129473/1‑150 (MQ=255)
                                                   aCAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCAAGTGAC‑TGGGCCAGGGTCGGTCGACCCTGAGCGGGCTTACTTCTTAACGCAGGTTGCTCCTTGTTTTtgttgt                                                                                                   >  1:1860977/1‑150 (MQ=255)
                                                     aGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTAc                                                                                                 <  2:446516/150‑1 (MQ=255)
                                                            aTGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTgc                                                                                          <  1:26631/150‑1 (MQ=255)
                                                             tGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATc                                                                                              <  1:111534/145‑1 (MQ=255)
                                                             tGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATc                                                                                              >  2:111534/1‑145 (MQ=255)
                                                              gcgcAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCcttgttct                                                                                                         >  1:1087384/1‑133 (MQ=255)
                                                              gcgcAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCcttgttct                                                                                                         <  2:1087384/133‑1 (MQ=255)
                                                                gcagcaCGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCcttg                                                                                                             >  1:691898/1‑127 (MQ=255)
                                                                gcagcaCGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCcttg                                                                                                             <  2:691898/127‑1 (MQ=255)
                                                                gcagcaCGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTgccgcc                                                                                      >  2:1368202/1‑150 (MQ=255)
                                                                gcagcaCGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGAGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTgccgcc                                                                                      >  1:497268/1‑150 (MQ=255)
                                                                    caCGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCTGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGccc                                                                                  >  1:22692/1‑150 (MQ=255)
                                                                    caCGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGccc                                                                                  <  1:1686381/150‑1 (MQ=255)
                                                                     aCGTCGACGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATcc                                                                                             <  1:537452/138‑1 (MQ=255)
                                                                     aCGTCGACGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATcc                                                                                             >  2:537452/1‑138 (MQ=255)
                                                                      cgtcttCGACTCGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGa                                                                                <  2:1715793/150‑1 (MQ=255)
                                                                        tcgtcgACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGACAACTTGTTGCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGata                                                                              <  2:1380857/150‑1 (MQ=255)
                                                                          gtcgACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATg                                                                            >  2:13890/1‑150 (MQ=255)
                                                                          gtcgACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATg                                                                            >  1:1767439/1‑150 (MQ=255)
                                                                                       acCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGt                                                               >  2:903336/1‑150 (MQ=255)
                                                                                         cTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCa                                                             >  2:1373975/1‑150 (MQ=255)
                                                                                          tGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCGGGTTGCTCCTTGTTCTGGTTGTACATCCTGCCGGCGCCCGCTATGACGGGGCGGCGGTCAt                                                            >  1:368332/1‑150 (MQ=255)
                                                                                          tGCACCTGGGGATGCCCGATGGCCACCTGCCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCag                                                            >  2:658262/1‑149 (MQ=255)
                                                                                          tGCACCTGGGGACGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTAc                                                                                                 >  1:2216905/1‑113 (MQ=255)
                                                                                          tGCACCTGGGGACGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTAc                                                                                                 <  2:2216905/113‑1 (MQ=255)
                                                                                            cACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCcttgttctt                                                                                                        <  2:1859804/104‑1 (MQ=255)
                                                                                            cACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCcttgttctt                                                                                                        >  1:1859804/1‑104 (MQ=255)
                                                                                             aCCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCtt                                                         <  2:1265390/150‑1 (MQ=255)
                                                                                               cTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCAATATGACGGGGCGGCGGTCATCTTGc                                                       >  1:1785624/1‑150 (MQ=255)
                                                                                                tGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGcc                                                      <  2:1488376/150‑1 (MQ=255)
                                                                                                tGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGATCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGcc                                                      >  1:541702/1‑150 (MQ=255)
                                                                                                 ggggATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCg                                                     >  1:805746/1‑150 (MQ=255)
                                                                                                  gggATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCgg                                                    >  1:1041998/1‑150 (MQ=255)
                                                                                                    gATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAg                                                  <  1:585648/150‑1 (MQ=255)
                                                                                                    gATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGCGTCGGTCGTCCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTANATCCTGCCGCCGCCCGATATGTCGTGGCGGCGGTCATCTTGCCGGAg                                                  <  1:300929/150‑1 (MQ=255)
                                                                                                         ccGATGGCCACCTGGCGGTAGCGCG‑GGCGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTg                                             >  2:577404/1‑150 (MQ=255)
                                                                                                         ccGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTg                                             >  1:370944/1‑150 (MQ=255)
                                                                                                         ccGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTg                                             >  2:219489/1‑150 (MQ=255)
                                                                                                          cGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTgg                                            >  1:194765/1‑150 (MQ=255)
                                                                                                          cGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTgg                                            <  1:1437136/150‑1 (MQ=255)
                                                                                                          cGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTgg                                            <  2:370944/150‑1 (MQ=255)
                                                                                                           gATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCAATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTggg                                           <  2:1785624/150‑1 (MQ=255)
                                                                                                                ccACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAgg                                                 <  1:2429259/139‑1 (MQ=255)
                                                                                                                ccACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAgg                                                 >  2:2429259/1‑139 (MQ=255)
                                                                                                                ccACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGc                                      >  2:1922845/1‑150 (MQ=255)
                                                                                                                         ggTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGGCTAg                             >  1:2402427/1‑150 (MQ=255)
                                                                                                                               gcg‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGGCTAGATGGGa                       <  2:2402427/150‑1 (MQ=255)
                                                                                                                               gcg‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGGCTAGATGGGa                       <  1:324770/150‑1 (MQ=255)
                                                                                                                                 g‑gACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGGCTAGATGGGATa                     >  2:278517/1‑150 (MQ=255)
                                                                                                                                      gTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGGCTAGATGGGATAGTGa                 >  2:395415/1‑150 (MQ=255)
                                                                                                                                       ccgctcAGGGTCGACCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTACTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGGCTAGATGGGATAGTGAc                >  1:2125982/6‑150 (MQ=255)
                                                                                                                                        cgctcAGGGTCGACCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGGCTAGATGGGATAGTGAcg               >  1:2353384/5‑150 (MQ=255)
                                                                                                                                        cgctcAGGGTCGACCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCCGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGGCTAGATgg                         <  1:2052871/136‑1 (MQ=255)
                                                                                                                                        cgctcAGGGTCGACCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCCGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGGCTAGATgg                         >  2:2052871/5‑140 (MQ=255)
                                                                                                                                        cgctcAGGGTCGACCGACCCTG‑GCGGGCTTCGTTATTCACGCAGGTTGCTGCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACgg                                                                        >  2:1327316/5‑92 (MQ=38)
                                                                                                                                        cgctcAGGGTCGACCGACCCTG‑GCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACgg                                                                        <  1:137197/88‑1 (MQ=38)
                                                                                                                                        cgctcAGGGTCGACCGACCCTG‑GCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACgg                                                                        <  1:1327316/88‑1 (MQ=38)
                                                                                                                                        cgctcAGGGTCGACCGACCCTG‑GCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACgg                                                                        >  2:137197/5‑92 (MQ=38)
                                                                                                                                         gctcAGGGTCGACCGACCCTGGGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGGCTAGATGGGATAGTGAcgc              >  2:1384290/4‑150 (MQ=255)
                                                                                                                                           ccAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGGCTAGATGGGATAGTGACGCgg            >  1:312489/1‑150 (MQ=255)
                                                                                                                                              gggTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGGCTAGATggg                        >  1:467622/1‑135 (MQ=255)
                                                                                                                                              gggTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGGCTAGATggg                        <  2:467622/135‑1 (MQ=255)
                                                                                                                                                   ggtcgACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGGCTAGATGGGATAGTGACGCGGGCCGTGCt    >  1:2076853/1‑150 (MQ=255)
                                                                                                                                                   ggtcgACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGGCTAGATGGGATAGTGACGCGGGCCGTGCt    <  1:1373975/150‑1 (MQ=255)
                                                                                                                                                   ggtcgACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGGCTAGATGGGATAGTGACGCGGGCCGTGCt    >  1:2076854/1‑150 (MQ=255)
                                                                                                                                                    gtcgACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGGCTAGATGGGATAGTGACGCGGGCCGTGCTg   >  1:2246744/1‑150 (MQ=255)
                                                                                                                                                     tcgACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGGCTAGATGGGATAGTGACGCGGGCCGTGCTgg  >  2:2221248/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCG‑GACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGGCTAGATGGGATAGTGACGCGGGCCGTGCTGG  >  NC_002947/3796321‑3796618

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑