| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,125,894 | A→G | 6.2% | intergenic (‑19/+167) | PP_3629 ← / ← opdT‑II | hypothetical protein/tyrosine‑specific outer membrane porin D |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,125,894 | 0 | A | G | 6.2% | 239.0 / 2.8 | 79 | intergenic (‑19/+167) | PP_3629/opdT‑II | hypothetical protein/tyrosine‑specific outer membrane porin D |
| Reads supporting (aligned to +/- strand): ref base A (38/36); new base G (3/2); total (41/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTGAAGGGTAATCGGCGGGAGCCTGGTGCACAGCGACAACCCGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGCCCCAAGCGGAGCGCCAGAAAATCCACCTAAACCAAAGG > NC_002947/4125746‑4126036 | cTGAAGGGTGAGTGGCGGGAGCCTGGTGCACAGCGACAACCCGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGaa < 2:436453/150‑1 (MQ=255)cTGAAGGGTAATCGGCGGGAGCCTGGTGCACAGCGACAACCCGGCTATCGGGGCAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGaa > 1:1366051/1‑150 (MQ=255)cTGAAGGGTAATCGGCGGGAGCCTGGTGCACAGCGACAACCCGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGaa < 1:939743/150‑1 (MQ=255)cTGAAGGGTAATCGGCGGGAGCCTGGTGCACAGCGACAACCCGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGaa > 1:1791834/1‑150 (MQ=255)cTGAAGGGTAATCGGCGGGAGCCTGGTGCACAGCGACAACCCGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGaa > 2:363362/1‑150 (MQ=255) aTCGGCGGGAGCCTGGTGCACAGCGACAACCCGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCtt < 1:2287751/150‑1 (MQ=255) aTCGGCGGGAGCCTGGTGCACAGCGACAACCCGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCtt > 2:1294680/1‑150 (MQ=255) cggcggGAGCCTGGTGCACAGCGACAACCCGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGa > 1:2089205/1‑150 (MQ=255) aGCCTGGTGCACAGCGACAACCCGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGc < 2:2089205/150‑1 (MQ=255) gTGCACAGCGACAACCCGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATa < 1:924502/150‑1 (MQ=255) gTGCACAGCGACAACCCGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATa < 2:2337963/150‑1 (MQ=255) gCACAGCGACAACCCGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGGAGGTGAGCCTTGAGTCTAGCCCCATAGc > 2:892702/1‑150 (MQ=255) gCACAGCGACAACCCGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGGAGGTGAGCCTTGAGTCTAGCCCCATAGc > 2:892712/1‑150 (MQ=255) gCACAGCGACAACCCGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGc > 2:892741/1‑150 (MQ=255) acaGCGACAACCCGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAg > 1:1020153/1‑127 (MQ=255) acaGCGACAACCCGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAg < 2:2277449/127‑1 (MQ=255) acaGCGACAACCCGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAg < 2:1020153/127‑1 (MQ=255) acaGCGACAACCCGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAg > 1:2277449/1‑127 (MQ=255) caGCGACAACCCGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGcccc < 1:1674150/150‑1 (MQ=255) gCGACAACCCGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCgg > 1:2209467/1‑150 (MQ=255) cccGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTa < 1:896821/128‑1 (MQ=255) cccGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTa > 2:896821/1‑128 (MQ=255) cccGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATa < 2:2309692/136‑1 (MQ=255) cccGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATa > 1:2309692/1‑136 (MQ=255) cTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGc < 1:849204/150‑1 (MQ=255) aTCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGt > 2:1577003/1‑118 (MQ=255) aTCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGt < 1:1577003/118‑1 (MQ=255) aaaGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGacca > 1:2248762/1‑150 (MQ=255) ttCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTg > 1:1151459/1‑150 (MQ=255) gggCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTa < 1:2073310/132‑1 (MQ=255) gggCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTa > 2:2073310/1‑132 (MQ=255) gAAGTTCGTCGCCTCTTCGGCATCTTTGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGc < 1:2335004/150‑1 (MQ=255) aGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAg < 1:676359/150‑1 (MQ=255) gTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAg < 1:1657034/81‑1 (MQ=255) gTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAg > 2:1657034/1‑81 (MQ=255) ccTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAg > 1:1261620/1‑150 (MQ=255) tctTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATTCAAATGCAGGATTGATAGGc > 1:546945/1‑150 (MQ=255) tctTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGc < 1:2426651/150‑1 (MQ=255) ttCGGCATCGTGGTCGTACCACAGGCAGATGGTAATCATGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGa > 1:1145466/1‑150 (MQ=255) ggCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAAt < 1:1671899/130‑1 (MQ=255) ggCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAAt > 2:1671899/1‑130 (MQ=255) gCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGAt > 1:754669/1‑123 (MQ=255) gCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGAt < 2:754669/123‑1 (MQ=255) cacaGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAg > 1:136933/1‑118 (MQ=255) cacaGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAg < 2:136933/118‑1 (MQ=255) caGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAg > 1:132207/1‑134 (MQ=255) caGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAg < 2:132207/134‑1 (MQ=255) aGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGGAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGcc > 1:421091/1‑150 (MQ=255) aGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGcc > 1:421204/1‑150 (MQ=255) aGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGCCCCaa > 1:1738605/1‑150 (MQ=255) gATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGGAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGCCCCAAg < 1:892702/150‑1 (MQ=255) gATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGGAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGCCCCAAg < 1:892712/150‑1 (MQ=255) gATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGa > 2:1171277/1‑123 (MQ=255) gATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGa < 1:1171277/123‑1 (MQ=255) gATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGCCCCAAg < 1:892741/150‑1 (MQ=255) ggTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGCCCCAAGCgg < 2:2248762/150‑1 (MQ=255) gtTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGCCCCAAGCGGAgc < 1:1294680/150‑1 (MQ=255) ttGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCCAGCGTCGAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGCCCCAAGCGGAGCGCCa > 1:553714/1‑150 (MQ=255) gCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCgg < 1:1800209/68‑1 (MQ=255) gCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCgg > 2:1800209/1‑68 (MQ=255) tCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGCCCCAAGCGGAGCGCCAGAAAATc < 1:401382/150‑1 (MQ=255) gTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAg < 2:2106372/97‑1 (MQ=255) gTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAg > 1:2106372/1‑97 (MQ=255) cTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGCCCCAAGCGGAGCGCCAGAAAATCCACCTAAACCa > 2:53533/1‑150 (MQ=255) tCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGCCCCAAGCGGAGCGCCAGAAAATCCACCTAAACCaa > 2:869644/1‑150 (MQ=255) ccAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGAt < 1:1434968/87‑1 (MQ=255) ccAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGAt > 2:1434968/1‑87 (MQ=255) ccAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGCCCCAAGCGGAGCGCCAGAAAATCCACCTAAACCaaa < 2:1261620/150‑1 (MQ=255) ccAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGCCCCAAGCGGAGCGCCAGAAAATCCACCTAAACCaaa > 1:2245657/1‑150 (MQ=255) ccAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGCCCCAAGCGGAGCGCCAGAAAATCCACCTAAACCaaa < 1:363362/150‑1 (MQ=255) ccAAGATCGAAGGTGAGCCTTGAGTCTACCCCCATAGCCCTGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGCCCCAAGCGGAGCGCCAGAAAATCCACCTAAACCaaa < 1:217554/150‑1 (MQ=255) cAAGATCGAAGGTGAGCCTTGATTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGa > 1:1856444/1‑68 (MQ=255) cAAGATCGAAGGTGAGCCTTGATTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGa < 2:1856444/68‑1 (MQ=255) cAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCTGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGCCCCAAGCGGGTCGCCAGAAAATCCACCTAAACCAAAg > 1:1567484/1‑150 (MQ=255) cAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGAt > 2:1164092/1‑82 (MQ=255) cAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGAt < 1:1164092/82‑1 (MQ=255) aaGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGCCCCAAGCGGAGCGCCAGAAAATCCAc < 1:2335141/138‑1 (MQ=255) aaGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGCCCCAAGCGGAGCGCCAGAAAATCCACCTAAACCAAAgg > 1:1409366/1‑150 (MQ=255) aaGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGCCCCAAGCGGAGCGCCAGAAAATCCACCTAAACCAAAgg > 1:870869/1‑150 (MQ=255) aaGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGCCCCAAGCGGAGCGCCAGAAAATCCACCTAAACCAAAgg > 1:1745187/1‑150 (MQ=255) aaGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGCCCCAAGCGGAGCGCCAGAAAATCCACCTAAACCAAAgg < 2:870869/150‑1 (MQ=255) aaGATCGAAGGTGAGACTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGCCCCAAGCGGAGCGCCAGAAAATCCAc > 2:2335141/1‑138 (MQ=255) tCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGAT‑AAAAAAGCGCCCCAAGc < 2:4008/114‑1 (MQ=255) tCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGAT‑AAAAAAGCGCCCCAAGc > 1:4008/1‑114 (MQ=255) | CTGAAGGGTAATCGGCGGGAGCCTGGTGCACAGCGACAACCCGGCTATCGGGGAAAGTTCGGGCGTAGAAGTTCGCCGCCTCTTCGGCATCGTGGTCGTACCACAGGCAGATGGTGTTCTTGGCAGTCATGGTCTTGCTCCAAGATCGAAGGTGAGCCTTGAGTCTAGCCCCATAGCCCCGGCGTACCGGTAGCACCTGACCACCTGATGCAAATGCAGGATTGATAGGCGATCAAGCCGATAAAAAAAGCGCCCCAAGCGGAGCGCCAGAAAATCCACCTAAACCAAAGG > NC_002947/4125746‑4126036 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |