| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,270,911 | T→G | 5.9% | I336S (ATC→AGC) | mrdA‑I → | transpeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,270,911 | 0 | T | G | 5.9% | 281.6 / 5.3 | 102 | I336S (ATC→AGC) | mrdA‑I | transpeptidase |
| Reads supporting (aligned to +/- strand): ref base T (45/50); new base G (2/5); total (47/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.47e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 104 total aligned reads displayed.
CCCCAGCTTCGACCCCAACTTGTTCGTCAAGGGCATCAGCTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTC > NC_002947/4270765‑4271058 | ccccAGCTTCGACCCCAACTTGTTCGTCAAGGGCATCAGCTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACAGGGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGc > 1:1595239/1‑150 (MQ=255) ccAGCTTCGACCCCAACTTGTTCGTCAAGGGCATCAGCTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTg > 2:228620/1‑150 (MQ=255) cAGCTTCGACCCCAACTTGTTCGTCAAGGGCATCAGCTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCCgg > 2:371254/1‑150 (MQ=255) cAGCTTCGACCCCAACTCGTTCGTCAAGGGCATCAGCTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCCACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCAGCGATgg < 1:2064062/150‑1 (MQ=255) cTTCGACCCCAACTTGTTCGTCAAGGGCATCAGCTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCAt > 2:119399/1‑141 (MQ=255) cTTCGACCCCAACTTGTTCGTCAAGGGCATCAGCTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCAt < 1:119399/141‑1 (MQ=255) ttCGACCCCAACTTGTTCGTCAAGGGCATCAGCTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTc > 2:726637/1‑150 (MQ=255) ccAACTTGTTCGTCAAGGGCATCAGCTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCg < 2:1596867/150‑1 (MQ=255) aaCTTGTTCGTCAAGGGCATCAGCTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCggg < 2:1169603/150‑1 (MQ=255) aaCTTGTTCGTCAAGGGCATCAGCTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCggg < 2:1436792/150‑1 (MQ=255) aaCTTGTTCGTCAAGGGCATCAGCTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCggg < 2:2182033/150‑1 (MQ=255) tGTTCGTCAAGGGCATCAGCTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGa < 2:2393160/150‑1 (MQ=255) gTTCGGCAAGGGCATCAGCTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGAt < 1:401998/150‑1 (MQ=255) ttCGTCAAGGGCATCAGCTTCAAGCAGTAGGCCGCGCTGCGCGGCTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATAGCTGGCCTCGACAGCGGGGTGATc < 2:749131/150‑1 (MQ=255) cGTCAAGGGCATCAGCTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCAc < 1:382873/150‑1 (MQ=255) aaGGGCATCAGCTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCt < 1:538868/150‑1 (MQ=255) ggCATCAGCTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCAccccgctg < 1:1156339/150‑5 (MQ=255) gCATCAGCTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCa > 2:1057196/1‑150 (MQ=255) cATCAGCTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGc > 2:535916/1‑130 (MQ=255) cATCAGCTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGc < 1:535916/130‑1 (MQ=255) cAGCTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCg < 2:2234988/150‑1 (MQ=255) aGCTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCgg < 2:483196/150‑1 (MQ=255) cTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCggg > 2:2284824/1‑127 (MQ=255) cTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCggg < 1:2284824/127‑1 (MQ=255) ttCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCAcc < 1:1012071/135‑1 (MQ=255) ttCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGgtg < 1:228620/150‑1 (MQ=255) aaGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTc < 2:890326/150‑1 (MQ=255) aaGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTc < 2:1161373/150‑1 (MQ=255) aaGCAGTATGCCGCGCTGCGCGACTCCATAGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGCGTTc > 1:89795/1‑150 (MQ=255) aGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCg > 2:1713528/1‑150 (MQ=255) gCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGa > 2:1548058/1‑150 (MQ=255) cAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGgtgt < 2:591958/145‑1 (MQ=255) cAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGgtgt > 1:591958/1‑145 (MQ=255) tATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCgg < 1:1301727/138‑1 (MQ=255) tATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCgg > 2:1301727/1‑138 (MQ=255) aTGCCGCGCTGCGCGACTCCATCGAGCGCCCACTGTTCACCCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCAATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCgg < 2:690523/150‑1 (MQ=255) aTGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCgg < 1:125865/150‑1 (MQ=255) tGCCGCGCTGCGCGACTCCATCTACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCggg > 1:1648934/1‑150 (MQ=255) tGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCggg < 1:1027962/150‑1 (MQ=255) gCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCAGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGc > 1:1310727/1‑150 (MQ=255) cgcTGCGCGACTCCATCGACCGCCCCCTGTTCAACCGTGTCCTGCGCGGGCTGTCTGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGctact < 2:519445/150‑1 (MQ=255) tGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACg > 2:1251336/1‑150 (MQ=255) gcgcGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATc < 1:2137600/112‑1 (MQ=255) gcgcGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATc > 2:2137600/1‑112 (MQ=255) aCTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGc < 1:2310674/150‑1 (MQ=255) tCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGccc > 1:1848000/1‑150 (MQ=255) cATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCaa > 1:1776873/1‑150 (MQ=255) aTCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAAc > 2:2191257/1‑150 (MQ=255) aTCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTCAAGTTTCCGGCTCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAAc < 2:1380908/150‑1 (MQ=255) tCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGc < 1:1673323/131‑1 (MQ=255) tCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGc > 2:1673323/1‑131 (MQ=255) cccACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACca > 2:2288861/1‑150 (MQ=255) ccACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACcac > 2:825425/1‑150 (MQ=255) aCTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACaa > 1:73413/1‑150 (MQ=255) cTGTTAAACCGTGTCCTGCGCGGCCTGTATGCGAACGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACCGCGGGGTGATCACCCCTGGCCGCCGGGTGTTCGACCCAGGCTACCACGCACCGCCCACCTATGACCACaaa > 2:1696568/1‑149 (MQ=255) ttCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTAc > 1:1556019/1‑150 (MQ=255) tCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTAcc < 1:1007054/150‑1 (MQ=255) aaCCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCtactac < 2:71771/120‑1 (MQ=255) aaCCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCtactac > 1:71771/1‑120 (MQ=255) ccGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTg < 1:2342760/79‑1 (MQ=255) ccGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTg > 2:2342760/1‑79 (MQ=255) gtCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTgg < 2:1595239/150‑1 (MQ=255) tCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCaa < 2:278700/124‑1 (MQ=255) tCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCaa > 1:278700/1‑124 (MQ=255) cTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAAc < 1:486983/150‑1 (MQ=255) tGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAAcc > 1:164261/1‑150 (MQ=255) tGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAAcc > 1:1689884/1‑150 (MQ=255) ggCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAgc < 1:1053791/150‑1 (MQ=255) cTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAgcggc < 1:2290309/150‑1 (MQ=255) cTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAgcggc > 1:1364664/1‑150 (MQ=255) tATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGAc > 2:1221263/1‑150 (MQ=255) tGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACgg > 2:710919/1‑150 (MQ=255) ccGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCtactac > 1:112587/1‑92 (MQ=255) ccGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCtactac < 2:112587/92‑1 (MQ=255) ggCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCTGGGCTACTACGAACTGCAAAGCTGTTACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTg < 1:1637370/150‑1 (MQ=255) gACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCgg < 2:1543881/64‑1 (MQ=255) gACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCgg > 1:1543881/1‑64 (MQ=255) gACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGc > 1:61110/1‑115 (MQ=255) gACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACAt < 1:1713528/150‑1 (MQ=255) gACCGTGAAGCCTGAAGTGACCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGc < 2:61110/115‑1 (MQ=255) ccGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGt > 2:198887/1‑150 (MQ=255) gAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTacac < 1:1548058/150‑1 (MQ=255) gCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACcac > 2:1976103/1‑97 (MQ=255) gCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACcac < 1:1976103/97‑1 (MQ=255) cTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGCCAGCCGGGTGTTCGACCCGGGCTAAAATTAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCca < 1:156643/150‑1 (MQ=255) gAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAAc < 1:1156250/105‑1 (MQ=255) gAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAAc > 2:1156250/1‑105 (MQ=255) aGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGCCCCGGGCTACTACGAACTGCCCAACTATGCCCACAAGTACCGCAACTGGACCCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCcatcat < 2:1041320/150‑1 (MQ=255) tGGCCATCTCCGGCCTCGACCGCGGGTTCCCCACCCCTCGCACCCGGGTTCTCCACCCCGGTCACTACGAACTGCTCCACTATGACCTTAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGc < 2:1310727/150‑1 (MQ=255) tGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGc < 2:1556019/150‑1 (MQ=255) ggCCAGCGATGGCCTCGACAGCGGGGTGATCAccc < 2:363734/35‑1 (MQ=255) ggCCAGCGATGGCCTCGACAGCGGGGTGATCAccc > 1:363734/1‑35 (MQ=255) ggCCAGCGATGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGcta < 1:1832070/63‑1 (MQ=255) ggCCAGCGATGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGcta > 2:1832070/1‑63 (MQ=255) gCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGt > 1:57785/1‑150 (MQ=255) ccAGCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGtt < 1:1057196/150‑1 (MQ=255) cATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGt > 2:686690/1‑131 (MQ=255) cATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGt < 1:686690/131‑1 (MQ=255) cATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTc < 2:1848000/150‑1 (MQ=255) cATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTc > 1:2315704/1‑150 (MQ=255) | CCCCAGCTTCGACCCCAACTTGTTCGTCAAGGGCATCAGCTTCAAGCAGTATGCCGCGCTGCGCGACTCCATCGACCGCCCACTGTTCAACCGTGTCCTGCGCGGCCTGTATGCGCCCGGCTCGACCGTGAAGCCTGAAGTGGCCATCGCTGGCCTCGACAGCGGGGTGATCACCCCTGGCAGCCGGGTGTTCGACCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTC > NC_002947/4270765‑4271058 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |