| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,271,128 | G→A | 6.8% | E408E (GAG→GAA) | mrdA‑I → | transpeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,271,128 | 0 | G | A | 6.8% | 297.8 / 8.8 | 102 | E408E (GAG→GAA) | mrdA‑I | transpeptidase |
| Reads supporting (aligned to +/- strand): ref base G (43/52); new base A (3/4); total (46/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.32e-01 | |||||||||||
Only 100 of 105 total aligned reads displayed.
CCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGTTCCCCGGCGAGACGCTGATCCTTGGCATTGGCCAGGGTTACATGCAG > NC_002947/4270979‑4271275 | cccAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAg > 2:2372433/1‑150 (MQ=255)cccAACTATGACCACAAGTACCGAAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAg > 1:905929/1‑150 (MQ=255) ccAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCAAAATTGGGGCATCGACCGGCTGCACGACTACATGGCCGAGt > 1:1706209/1‑150 (MQ=255) aaCTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTc < 1:1953487/150‑1 (MQ=255) aaCTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTc > 1:2336256/1‑150 (MQ=255) ccTATGACCACAAGTACCGCAACTGGAACCGCAGCGCCGACGGCTGGGTGGACATGTACCCCGCCATCAAGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTCGGGCATCGACCGGCCGCCCGACTACCCGGCCGAgcccg > 2:85782/2‑146 (MQ=255) aCTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCg < 2:1776873/150‑1 (MQ=255) aCTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCg < 2:1052062/150‑1 (MQ=255) aCTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCg < 1:1604788/150‑1 (MQ=255) aCTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACAAAATGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCg < 1:1996874/150‑1 (MQ=255) tATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGc > 1:726109/1‑150 (MQ=255) tATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGc < 2:1709332/150‑1 (MQ=255) ccACAAGTACCGCAACTGGAGCCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCCTCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTggg > 1:508434/1‑150 (MQ=255) ccACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTggg < 1:39234/150‑1 (MQ=255) ccACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTggg > 2:1351160/1‑150 (MQ=255) ccACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCCACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTggg > 1:471296/1‑150 (MQ=255) cacaAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGc > 2:1854806/1‑150 (MQ=255) acaAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTAGGCCTGGGcc > 1:100954/1‑150 (MQ=255) gTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGaa > 1:1938872/1‑150 (MQ=255) gTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCCGGGCCAGaa > 1:2040084/1‑150 (MQ=255) ccGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGgt < 2:1109687/150‑1 (MQ=255) cGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGgtg < 1:825425/150‑1 (MQ=255) cAACGGGAACCGCAGCGGCGACGGCTGGGTGGACATGCACAACGCCATCATGCGTTCCAACGCCACCCACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTc < 2:1706209/150‑1 (MQ=255) aaCCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGAc < 2:2336256/150‑1 (MQ=255) cGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGAc > 1:1281877/1‑147 (MQ=255) cGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGAc < 2:1281877/147‑1 (MQ=255) cAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGtt < 1:2191257/150‑1 (MQ=255) ggcgACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAg < 2:905929/150‑1 (MQ=255) gACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCNAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGaa < 1:1351160/150‑1 (MQ=255) ggCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGcc > 1:1371335/1‑150 (MQ=255) ggTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCgg < 2:377675/150‑1 (MQ=255) aTGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATg < 1:1696568/150‑1 (MQ=255) aTGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAACTCGGccat > 1:855119/1‑100 (MQ=255) aTGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAACTCGGccat < 2:855119/102‑3 (MQ=255) aTGNACACCGCCATCATGCGTTCCAACGACACCTACTTCTATGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATg > 2:1515482/1‑150 (MQ=255) tGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGc < 2:1371335/150‑1 (MQ=255) acacCGCCATCATGCGTTCCAACGTCACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGcccc > 2:1608239/1‑149 (MQ=255) acacCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCt < 1:1844399/150‑1 (MQ=255) cacCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTc > 1:762356/1‑150 (MQ=255) acCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCg < 1:2372433/150‑1 (MQ=255) acCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCg > 1:1610190/1‑150 (MQ=255) acCGCCATCATGCGTTCCAACGACACCCACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCg < 2:471296/150‑1 (MQ=255) ccGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCgg > 1:2103114/1‑150 (MQ=255) cGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTgg > 2:558982/1‑95 (MQ=255) ccATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCg > 2:976939/1‑150 (MQ=255) atcatGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAACTCGGccatg > 1:1168578/1‑88 (MQ=255) atcatGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAACTCGGccatg < 2:1168578/91‑4 (MQ=255) tcatGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGt < 1:2209875/150‑1 (MQ=255) tGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAATTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGtt < 1:2127271/112‑1 (MQ=255) tGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAATTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGtt > 2:2127271/1‑112 (MQ=255) gCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGaa < 2:1861434/150‑1 (MQ=255) cAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCCACATCACGACTTCATTGCCTAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAgcgcgc < 1:1742969/150‑1 (MQ=255) gACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGcc < 2:76097/132‑1 (MQ=255) gACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGcc > 1:76097/1‑132 (MQ=255) acCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGaa > 1:269157/1‑105 (MQ=255) acCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGaa < 2:269157/105‑1 (MQ=255) cTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAg > 1:374963/1‑100 (MQ=255) cTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAg < 2:374963/100‑1 (MQ=255) cTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGGAGCGCGCCACacgacg > 1:1451399/1‑150 (MQ=255) cTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACacgacg > 1:716953/1‑150 (MQ=255) tACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGc > 2:481935/1‑150 (MQ=255) ttCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAg > 1:2084109/1‑150 (MQ=255) cTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGc < 2:762356/150‑1 (MQ=255) cTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGc > 2:816871/1‑150 (MQ=255) aCGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCt < 2:100954/150‑1 (MQ=255) cGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTGAGACGAAGCCCCCGGGCAGCTGCCCTCGGCCGTGTGCAAGCGCGCCACACGACGCCAGGCCTg < 2:1032705/150‑1 (MQ=255) aCCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGt < 1:465358/150‑1 (MQ=255) gcgcACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGTTcccc < 2:726109/150‑1 (MQ=255) gcACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGTTCCCCgg > 2:432135/1‑150 (MQ=255) gcACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGTTCCCCgg > 2:2188711/1‑150 (MQ=255) aGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGTTCCCCGGCgaga < 1:1221263/150‑1 (MQ=255) tGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGTTCCCCGGCGAGACGc < 1:816871/150‑1 (MQ=255) gggCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAgg > 1:408520/1‑74 (MQ=255) gggCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAgg < 2:408520/74‑1 (MQ=255) ggCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGTTCCCCGGCGAGACGCTg < 2:1918978/150‑1 (MQ=255) gCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGTTCCCCGGCGAGACGCTGa > 2:2074939/1‑150 (MQ=255) tctaCCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGTTCCCCGGCGAGACGCTGATcc > 2:1807906/4‑150 (MQ=255) gACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGTTCCCCGGc > 1:984647/1‑135 (MQ=255) gACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGTTCCCCGGCGAGACGCTGATCCtt > 2:1532365/1‑150 (MQ=255) gACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGTTCCCCGGCGAGACGCTGATCCtt < 1:481935/150‑1 (MQ=255) aCCGGGTGCCTGATTACATGGCCGAGTTCGGCCTGGGCCTGAAGGTGGCTCTGGACATGTTCGAGGAAGCCGCCGGGCTGATGCCCTCGGCCGCGTGGGAGCGTGCCTCACGATGCCAGGCCTGGTTCCCCGGCGAGACGCTGATCCTTg < 2:508434/150‑1 (MQ=255) aCCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGTTCCCCGGCGAGAc < 1:1434158/139‑1 (MQ=255) aCCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGTTCCCCGGCGAGAc > 2:1434158/1‑139 (MQ=255) aCCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGTTCCCCGGCGAGACGCTGATCCTTg > 1:700109/1‑150 (MQ=255) ccGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGaa < 1:1480922/67‑1 (MQ=255) ccGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGaa > 2:1480922/1‑67 (MQ=255) cGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGTTCCCCGGCGAGACGCTGATCCTTGGc > 1:382155/1‑150 (MQ=255) tGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGTTCCCCGGCGAGACGCTGATCCTTGGCATTg < 1:371254/150‑1 (MQ=255) gACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGt > 1:1309680/1‑85 (MQ=255) gACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGt < 2:1309680/85‑1 (MQ=255) aCTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGACGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGTTCCCCGGCGAGACGCTGATCCTTGGCATTGGCCAgg < 2:164261/150‑1 (MQ=255) aTGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCt > 1:407325/1‑106 (MQ=255) aTGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCt < 2:407325/106‑1 (MQ=255) aTGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGTTCCCCGGCGAGACGCTGATCCTTGGCATTGGCCAGGGTTAc > 2:1140141/1‑150 (MQ=255) gCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGTTCCCCGGTGAGACGCTGATCCTTGGCATTGGCCAGGGTTACATg < 1:1794929/150‑1 (MQ=255) gCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGTTCCCCGGCGAGACGCTGATCCTTGGCATTGGCCAGGGTTACATg < 2:2084109/150‑1 (MQ=255) ccGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCcaca > 2:1168462/1‑89 (MQ=255) ccGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCcaca < 1:1168462/89‑1 (MQ=255) gAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGGCACACGACGCCAGGTCTGGGTCCCCGGCGAGACGCGGATCCTTGGCATTGGCCAGGGTTACATGCAg < 2:2103114/150‑1 (MQ=255) gAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGTTCCCCGGCGAGACGCTGATCCTTGGCATTGGCCAGGGTTACATGCAg > 2:2046916/1‑150 (MQ=255) | CCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGCACGACTACATGGCCGAGTTCGGCCTGGGCCAGAAGGTGTCGCTGGACATGTTCGAGGAAGCCTCCGGGCTGATGCCCTCGGCCGAGTGGAAGCGCGCCACACGACGCCAGGCCTGGTTCCCCGGCGAGACGCTGATCCTTGGCATTGGCCAGGGTTACATGCAG > NC_002947/4270979‑4271275 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |