| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,296,219 | A→G | 6.2% | intergenic (+94/‑131) | PP_3765 → / → gloA | H‑NS family protein MvaT/lactoylglutathione lyase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,296,219 | 0 | A | G | 6.2% | 288.6 / 6.2 | 97 | intergenic (+94/‑131) | PP_3765/gloA | H‑NS family protein MvaT/lactoylglutathione lyase |
| Reads supporting (aligned to +/- strand): ref base A (53/38); new base G (3/3); total (56/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.81e-01 | |||||||||||
CAAGGCCTGGAAAGAACAGTATGGGGCCGCCACGGTAGAAAGCTGGGTACGCTGATGAAATGCCCACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGCCCCGTCTCAGGAGTTCCCATGAGCCTGCACGATCTGC > NC_002947/4296071‑4296368 | cAAGGCCTGGAAAGAACAGTATGGGGCCGCCACGGTAGAAAGCTGGGTACGCTGATGAAATGCCCACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACAt < 2:1439196/150‑1 (MQ=255) gCCTGGAAAGAACAGTATGGGGCCGCCACGGTAGAAAGCTGGGTACGCTGATGAAATGCCCACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCgg < 1:2401553/150‑1 (MQ=255) ccTGGAAAGAACAGTATGGGGCCGCCACGGTAGAAAGCTGGGTACGCTGATGAAATGCCCACATAGGCTTCGCACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCggg < 1:1613764/150‑1 (MQ=255) tGGAAAGAACAGTATGGGGCCGCCACGGTAGAAAGCTGGGTACGCTGATGAAATGCCCACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGTGACCCCA‑TCACGCGCCCGCACATGCGGGcc > 2:670845/1‑150 (MQ=255) ggAAAGAACAGTATGGGGCCGCCACGGTAGAAAGCTGGGTACGCTGATGAAATGCCCACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGAGCCCGCACATACGGGAct > 2:303537/1‑150 (MQ=255) gAAAGAACAGTATGGGGCCGCCACGGTAGAAAGCTGGGTACGCTGATGAAATGCCCACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATg > 1:717512/1‑142 (MQ=255) gAAAGAACAGTATGGGGCCGCCACGGTAGAAAGCTGGGTACGCTGATGAAATGCCCACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATg < 2:717512/142‑1 (MQ=255) gAAAGAACAGTATGGGGCCGCCACGGTAGAAAGCTGGGTACGCTGATGAAATGCCCACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCctc > 2:1974403/1‑150 (MQ=255) tATGGGGCCGCCACGGTAGAAAGCTGGGTACGCTGATGAAATGCCCACATAGGCTTCACACTTTTTTCATTTTGTCTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAgc > 2:2097944/1‑150 (MQ=255) tATGGGGCCGCCACGGTAGAAAGCTGGGTACGCTGATGAAATGCCCACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAgc > 2:2097964/1‑150 (MQ=255) ggggCCGCCACGGTAGAAAGCTGGGTACGCTGATGAAATGCCCACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGcc > 2:1174927/1‑150 (MQ=255) cACGGTAGAAAGCTGGGTACGCTGATGAAATGCCCACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCttt > 1:2020590/1‑150 (MQ=255) cGGTAGAAAGCTGGGTACGCTGATGAAATGCCCACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGc < 2:520918/150‑1 (MQ=255) ggTAGAAAGCTGGGTACGCTGATGAAATGCCCACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCa > 2:177878/1‑150 (MQ=255) aaaGCTGGGTACGCTGATGAAATGCCCACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGgcg > 2:1888028/1‑150 (MQ=255) aaGCTGGGTACGCTGATGAAATGCCCACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGgcgc > 1:1702092/1‑150 (MQ=255) aGCTGGGTACGCTGATGAAATGCCCACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCt > 1:869173/1‑150 (MQ=255) tACGCTGATGAAATGCCCACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCAttt < 2:2438967/150‑1 (MQ=255) gCTGATGAAATGCCCACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAATGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTgcg > 2:1227661/1‑150 (MQ=255) tgatgaAATGCCCACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCa > 2:439971/1‑150 (MQ=255) aaTGCCCACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGgc > 1:508621/1‑150 (MQ=255) ccACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACt > 1:1056424/1‑150 (MQ=255) ccACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACt > 1:243731/1‑150 (MQ=255) ccACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACt > 1:1805436/1‑150 (MQ=255) aTAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCg > 1:1436636/1‑150 (MQ=255) aGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGc > 1:342086/1‑113 (MQ=255) aGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGc < 2:342086/113‑1 (MQ=255) ggCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTAt > 1:2060318/1‑150 (MQ=255) ttCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCAt < 1:1174927/150‑1 (MQ=255) acacTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGc > 2:1474958/1‑150 (MQ=255) acacTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGc > 1:870080/1‑150 (MQ=255) acTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCa > 2:2061884/1‑150 (MQ=255) ttttttCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCTAGc > 1:660147/1‑150 (MQ=255) ttttCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCct < 2:1708920/150‑1 (MQ=255) acaTGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGgcgc < 2:1281337/123‑1 (MQ=255) acaAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCCTTTGCGCAAGCGGCGCACTGCCGTATCATGCCCAGcctgcctg > 2:208136/1‑150 (MQ=255) acaAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGgcgc > 1:1281337/1‑123 (MQ=255) acaAGGACTGGCTCAGTATCGAAACAGATAAAGGAC‑AGCCATGTCAGACGTTAGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCctgtctg > 1:1004042/1‑150 (MQ=255) caAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCgg > 2:754708/1‑66 (MQ=255) caAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCgg < 1:754708/66‑1 (MQ=255) aaGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCATGTGCGGGcgc < 1:383050/69‑3 (MQ=255) aaGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCATGTGCGGGcgc > 2:383050/1‑67 (MQ=255) aaGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAGTTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTgc < 2:661621/110‑1 (MQ=255) aaGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAGTTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTgc > 1:661621/1‑110 (MQ=255) aaGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGtt > 2:166690/1‑150 (MQ=255) ggACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGtttt < 1:450992/150‑1 (MQ=255) ggACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGtttt < 2:1004042/150‑1 (MQ=255) ggACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGtttt < 2:1702092/150‑1 (MQ=255) tGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACGTGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCg > 2:2061311/1‑150 (MQ=255) gCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGgc < 1:842503/90‑1 (MQ=255) gCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGgc < 1:842497/90‑1 (MQ=255) gCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGgc > 2:842497/1‑90 (MQ=255) gCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGgc > 2:842503/1‑90 (MQ=255) tCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGgcgc > 1:1677783/1‑150 (MQ=255) tCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGgcgc > 2:988663/1‑150 (MQ=255) gTATCGAAACAGCTAAAGGCCTAGCGCCCCCA‑TCCCGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTTCCGGCGCCCt < 2:1699534/150‑1 (MQ=255) tCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCATgcg > 2:987640/1‑150 (MQ=255) gAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGcc > 1:87213/1‑150 (MQ=255) gAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGcc < 2:2060318/150‑1 (MQ=255) aaaCAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGccc < 2:870080/150‑1 (MQ=255) aaCAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCg < 2:869173/150‑1 (MQ=255) cAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCTCCCGGc < 2:1805436/150‑1 (MQ=255) aGCTAAAGGACTCGCGACCACA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAggg > 2:2434168/1‑74 (MQ=255) aGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAggg < 1:2434168/74‑1 (MQ=255) aGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGcc < 1:166690/150‑1 (MQ=255) cTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGcccc > 2:1351414/1‑150 (MQ=255) cTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGcccc < 1:1227661/150‑1 (MQ=255) tAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGCCCCg > 1:889931/1‑150 (MQ=255) aaaGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGCCCCGt < 1:884415/150‑1 (MQ=255) aaGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGCCCCGtc > 1:404090/1‑150 (MQ=255) ccTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGCCCCGTCTCAg < 2:1293995/149‑1 (MQ=255) aCTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGCCCCGTCTCAg < 2:1677783/150‑1 (MQ=255) gCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGCCCCGTCTCAGGAGt > 1:2086848/1‑150 (MQ=255) gACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATc < 1:81203/94‑1 (MQ=255) gACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATc > 2:81203/1‑94 (MQ=255) aCCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGAGATTTAATTTGTGCAATCGGCGCACTGCCGTATCCTGGCCAGCCTGTATGTTTTGCAGGCGCCCTGCGCCCGGCCCCGTCTCAGGAGATcc > 2:576752/1‑150 (MQ=255) ccccA‑TCACGCGCCCGCACGTGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGCCCCGTCTCAGGAGTTccc < 1:2061311/150‑1 (MQ=255) cccA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAgg > 1:415571/1‑55 (MQ=255) cccA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAgg < 2:415571/55‑1 (MQ=255) cccA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGgcgc > 2:1894195/1‑119 (MQ=255) cccA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGgcgc < 1:1894195/119‑1 (MQ=255) ccA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGCCCCGTCTCAGGAGTTCCCAt < 2:404090/150‑1 (MQ=255) ccA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGCCCCGTCTCAGGAGTTCCCAt > 1:1462446/1‑150 (MQ=255) cA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCAttt < 1:797724/65‑1 (MQ=255) cA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCAttt > 2:797724/1‑65 (MQ=255) cA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGCCCCGTCTCAGGAGTTCCCATg > 1:556839/1‑150 (MQ=255) a‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGCCCCGTCTCAGGAGTTCCCATGa < 2:243731/150‑1 (MQ=255) a‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGCCCCGTCTCAGGAGTTCCCATGa < 1:439971/150‑1 (MQ=255) a‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCATTCATTTGGGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGGCCGGCACCGTCTCAGGAGTTCCCATGa > 1:442733/1‑150 (MQ=255) cgcgCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAAGCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGCCCCGTCTCAGGAGTTCCCATGAGCCt < 1:1348071/150‑1 (MQ=255) gcCCGCATGTGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGttt > 1:149057/1‑100 (MQ=255) gcCCGCATGTGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGttt < 2:149057/100‑1 (MQ=255) cccGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGCCCCGTCTCAGGAGTTCCCATGAGCCTGCAc < 2:556839/150‑1 (MQ=255) ccGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCGCTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGCCCCGTCTCAGGAGTTCCCATGAGCCTGCACg > 2:1378253/1‑150 (MQ=255) ccGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGCCCCGTCTCAGGAGTTCCCATGAGCCTGCACg > 2:1923472/1‑150 (MQ=255) gCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGCCCCGTCTCAGGAGTTCCCATGAGCCTGc > 2:1604330/1‑145 (MQ=255) gCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGCCCCGTCTCAGGAGTTCCCATGAGCCTGc < 1:1604330/145‑1 (MQ=255) acaTGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCt < 2:1527613/106‑1 (MQ=255) acaTGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCt > 1:1527613/1‑106 (MQ=255) aTGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGCCCCGTCTCAGGAGTTCCCATGAGCCTGCACGATCTGc < 1:1888028/150‑1 (MQ=255) | CAAGGCCTGGAAAGAACAGTATGGGGCCGCCACGGTAGAAAGCTGGGTACGCTGATGAAATGCCCACATAGGCTTCACACTTTTTTCACAAGGACTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCA‑TCACGCGCCCGCACATGCGGGCCTCTAATTTCAGCGCCCTGCCTTTGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGCGCCCGGCCCCGTCTCAGGAGTTCCCATGAGCCTGCACGATCTGC > NC_002947/4296071‑4296368 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |