Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,506,992 T→A 7.7% L215Q (CTA→CAA)  gqr → glutathionyl‑hydroquinone reductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,506,9920TA 7.7% 407.3 / 19.4 130L215Q (CTA→CAA) gqrglutathionyl‑hydroquinone reductase
Reads supporting (aligned to +/- strand):  ref base T (60/60);  new base A (5/5);  total (65/65)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.99e-01

Only 100 of 130 total aligned reads displayed.

CCGACCATCGAAGCACTGAACGAGCGCATCTACCCGGCGGTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCAAGTGCAACCTGCGCCGCCTGAGCGACTACCACAACCTGTCGAACTGG  >  NC_002947/4506850‑4507140
                                                                                                                                               |                                                                                                                                                    
ccGACCATCGAAGCACTGAACGAGCGCATCTACCCGGCGGTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGc                                                                                                                                               >  2:2027272/1‑150 (MQ=255)
ccGACCATCGAAGCACTGAACGAGCGCATCTACCCGGCGGTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGc                                                                                                                                               >  1:306635/1‑150 (MQ=255)
  gACCATCGAAGCACTGAACGAGCGCATCTACCCGGCGGTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCCGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGcctcca                                                                                                                                             <  1:661201/150‑5 (MQ=255)
     cATCGAAGCACTGAACGAGCGCATCTACCCGGCGGTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCg                                                                                                                                          >  2:1602731/1‑150 (MQ=255)
      aTCGAAGCACTGAACGAGCGCATCTACCCGGCGGTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTAGCAAGGcctcca                                                                                                                                             >  1:1375170/1‑142 (MQ=255)
        cGAAGCACTGAACGAGCGCATCTACCCGGCGGTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTa                                                                                                                                       <  2:306635/150‑1 (MQ=255)
         gAAGCACTGAACGAGCGCATCTACCCGGCGGTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTAc                                                                                                                                      <  1:2336849/150‑1 (MQ=255)
          aaGAACTGAACGAGCGCATCTACCCGGCGGTGAACAACGGTGTGTGCACACG‑TGTCGGTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTAcc                                                                                                                                     >  1:1356731/1‑150 (MQ=255)
             cACTGAACGAGCGCATCTACCCGGCGGTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTgg                                                                                                                                  <  2:1556607/150‑1 (MQ=255)
               cTGAACGAGCGCATCTACCCGGCGGTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTggcg                                                                                                                                >  1:1289344/1‑150 (MQ=255)
               cTGAACGAGCGCATCTACCCGGCGGTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTAGCAAGGcctcc                                                                                                                                              >  1:1046326/1‑133 (MQ=255)
                tGAACGAGCGCATCTACCCGGCGGTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGc                                                                                                                                         <  1:540543/140‑1 (MQ=255)
                tGAACGAGCGCATCTACCCGGCGGTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGc                                                                                                                                         >  2:540543/1‑140 (MQ=255)
                  aaCGAGCGCATCTACCCGGCGGTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTggcgggc                                                                                                                             >  2:2401841/1‑150 (MQ=255)
                    cGAGCGCATCTACCCGGCGGTGAACAACGGTGTGTTC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGa                                                                                                                           <  2:1686514/150‑1 (MQ=255)
                     gAGCGCATCTACCCGGCGGTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCCTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAg                                                                                                                          >  1:1700256/1‑150 (MQ=255)
                      aGCGCATCTACCCGGCGGTGAACAACGGTGTGTAG‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGt                                                                                                                         <  2:2209848/150‑1 (MQ=255)
                          cgtCTACCCGGCGGTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCt                                                                                                                     <  1:612093/148‑1 (MQ=255)
                           aTCTACCCGGCGGTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAg                                                                                                                                                    >  2:2089796/1‑118 (MQ=255)
                           aTCTACCCGGCGGTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAg                                                                                                                                                    <  1:2089796/118‑1 (MQ=255)
                           aTCTACCCGGCGGTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTg                                                                                                                    >  2:1489116/1‑150 (MQ=255)
                            tCTACCCGGCGGTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGa                                                                                                                   <  1:1602731/150‑1 (MQ=255)
                                  cggcggTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAgg                                                                                                             >  1:1727833/1‑150 (MQ=255)
                                  cggcggTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAgg                                                                                                             >  2:195229/1‑150 (MQ=255)
                                  cggcggTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTAGCAAGGcctccag                                                                                                                                            >  1:1569372/1‑114 (MQ=255)
                                      ggTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAgg                                                                                                             <  1:1898363/146‑1 (MQ=255)
                                      ggTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAgg                                                                                                             >  2:1898363/1‑146 (MQ=255)
                                      ggTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGa                                                                                                         <  1:1847734/150‑1 (MQ=255)
                                      ggTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTAGCAAGGcctccag                                                                                                                                            <  2:1754520/115‑6 (MQ=255)
                                      ggTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTAGCAAGGcctccag                                                                                                                                            >  1:1754520/1‑110 (MQ=255)
                                            caacGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACg                                                                                                   >  1:1149890/1‑150 (MQ=255)
                                             aacGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGGGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGCCGAAAAACTGCCTGACCGAGGCTGATGTACGc                                                                                                  >  1:1817717/1‑150 (MQ=255)
                                             aacGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAGCGATCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGc                                                                                                  <  1:1979643/150‑1 (MQ=255)
                                               cGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCt                                                                                                <  2:2299901/150‑1 (MQ=255)
                                                ggTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTg                                                                                               >  2:1062969/1‑150 (MQ=255)
                                                 gtgtgtAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTga                                                                                              >  1:1763688/1‑149 (MQ=255)
                                                  tgtgtAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGtt                                                                                             <  2:2012669/150‑1 (MQ=255)
                                                  ggtgtAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGCGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGtt                                                                                             <  1:1592936/149‑1 (MQ=255)
                                                   gtgtAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTc                                                                                            >  2:597218/1‑150 (MQ=255)
                                                       aC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTa                                                                                        >  1:872519/1‑150 (MQ=255)
                                                       aC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTa                                                                                        <  1:1062969/150‑1 (MQ=255)
                                                               aGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTAc                                                                                                                       <  2:880325/112‑1 (MQ=255)
                                                               aGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTAc                                                                                                                       >  1:880325/1‑112 (MQ=255)
                                                                ggCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTg                                                                                <  1:565983/150‑1 (MQ=255)
                                                                 gCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATc                                                                                                                                           >  2:568151/1‑90 (MQ=255)
                                                                 gCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTgc                                                                               >  1:1373079/1‑150 (MQ=255)
                                                                   tttGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTacac                                                                                     <  2:836359/142‑1 (MQ=255)
                                                                   tttGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTacac                                                                                     >  1:836359/1‑142 (MQ=255)
                                                                      gCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTc                                                                          <  1:597218/150‑1 (MQ=255)
                                                                        tACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGc                                                                                                  <  2:1823865/124‑1 (MQ=255)
                                                                         aCCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTAc                                                                                                    >  2:1551891/1‑121 (MQ=255)
                                                                         aCCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGAt                                                                       >  1:671157/1‑150 (MQ=255)
                                                                           cACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGtt                                                                                             >  2:1973020/1‑126 (MQ=255)
                                                                           cACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGc                                                                     >  1:392001/1‑150 (MQ=255)
                                                                            aCGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGcc                                                                    <  2:872519/150‑1 (MQ=255)
                                                                              gCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCgt                                                                  >  1:1560391/1‑150 (MQ=255)
                                                                                aaGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCgtgt                                                                <  2:671157/150‑1 (MQ=255)
                                                                                   aCGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGAt                                                                                                        >  1:660204/1‑107 (MQ=255)
                                                                                   aCGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGAt                                                                                                        <  2:660204/107‑1 (MQ=255)
                                                                                      cTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACg                                                          <  1:598886/150‑1 (MQ=255)
                                                                                        taccatgCTGCCTTTGAGGATGTGTACAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACggg                                                        <  2:392001/144‑1 (MQ=255)
                                                                                                tGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCaa                                                <  2:1373079/150‑1 (MQ=255)
                                                                                                tGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCaa                                                <  2:1040586/150‑1 (MQ=255)
                                                                                                tGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCaa                                                <  2:1149890/150‑1 (MQ=255)
                                                                                                tGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGATGCTGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCaa                                                <  1:1489116/150‑1 (MQ=255)
                                                                                                   cTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCAAGTg                                             <  1:2027272/150‑1 (MQ=255)
                                                                                                    tttGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCAc                                                                                          >  2:2071940/1‑104 (MQ=255)
                                                                                                    tttGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCAc                                                                                          <  1:2071940/104‑1 (MQ=255)
                                                                                                    tttGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCaa                                                <  2:80513/146‑1 (MQ=255)
                                                                                                    tttGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCaa                                                >  1:80513/1‑146 (MQ=255)
                                                                                                    tttGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCAAGTGc                                            >  2:37685/1‑150 (MQ=255)
                                                                                                      tGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTGAAGTGccc                                          <  2:291094/150‑3 (MQ=255)
                                                                                                         ggATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCAAGTGCAACCt                                       >  2:1832270/1‑150 (MQ=255)
                                                                                                           aTGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCAAGTGCAACCTgc                                     <  2:1700256/150‑1 (MQ=255)
                                                                                                             gtgtTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCAAGTGCAACCTgcgc                                   <  1:1832270/150‑1 (MQ=255)
                                                                                                               gtTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCAAGTGCAAACTGcgccg                                 >  2:13345/1‑150 (MQ=255)
                                                                                                                    aCGAGCTGGATTACCTGGAGGCCTCGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCtt                                                                           <  1:2186619/103‑1 (MQ=255)
                                                                                                                    aCGAGCTGGATTACCTGGAGGCCTCGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCtt                                                                           >  2:2186619/1‑103 (MQ=255)
                                                                                                                      gAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTa                                                                                        <  1:708558/88‑1 (MQ=255)
                                                                                                                      gAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTa                                                                                        >  2:708558/1‑88 (MQ=255)
                                                                                                                      gAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCAAGTGCAACCTGCGCCGCCTGAGc                          >  1:1665778/1‑150 (MQ=255)
                                                                                                                       aGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCAAGTGCAACCTGCGCCGCCTGAGCg                         >  1:2311260/1‑150 (MQ=255)
                                                                                                                            gATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCt                                                                                                           <  2:2059543/63‑1 (MQ=255)
                                                                                                                            gATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCt                                                                                                           >  1:2059543/1‑63 (MQ=255)
                                                                                                                            gATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCAAGTGCAACCTGCGCCGCCTGAGCGACTAc                    >  1:547907/1‑150 (MQ=255)
                                                                                                                                 ccTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCAAGTGCAACCTGCGCCGCCTGAGCGACTACCACaa               <  2:1187237/150‑1 (MQ=255)
                                                                                                                                  cTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGa                                                                        <  1:1950306/92‑1 (MQ=255)
                                                                                                                                  cTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGa                                                                        >  2:1950306/1‑92 (MQ=255)
                                                                                                                                    tgcggCCTAGCAAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCAAGTGCAACCTGCGCCGCCTGAGCGACTACCACAACCt            >  2:718264/4‑150 (MQ=255)
                                                                                                                                     gAGGCCTTGCTCGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCgt                                                                  <  2:1448965/95‑1 (MQ=255)
                                                                                                                                     gAGGCCTTGCTCGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCgt                                                                  >  1:1448965/1‑95 (MQ=255)
                                                                                                                                       ggCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCAAGTGCAACCTGCGCCGCCTGAGCGACTACCACAACCTGTc         <  1:2401841/150‑1 (MQ=255)
                                                                                                                                       ggCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCAAGTGCAACCTGCGCCGCCTGAGCGACTACCACAACCTGTc         <  1:60872/150‑1 (MQ=255)
                                                                                                                                          cTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGcc                                                                    >  2:1295405/1‑88 (MQ=255)
                                                                                                                                          cTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCAAGTGCAACCTGCGCCGCCTGGGCGACTACCACAACCTGTc         >  2:322376/1‑147 (MQ=255)
                                                                                                                                          cTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCAAGTGCAACCTGCGCCGCCTGGGCGACTACCACAACCTGTc         <  1:322376/147‑1 (MQ=255)
                                                                                                                                          cTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCAAGAGAAAGCGGCGCCGCCTGAGCGACTACCACAACCTGTCGaa      >  2:2017063/1‑150 (MQ=255)
                                                                                                                                           ttGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCAAGTGCAAATTTCGCCGCCTGAGCGACTACCACAACCTGTCGAAc     <  1:2017063/150‑1 (MQ=255)
                                                                                                                                              cTAGGCCGCAATCGCTCCAGAACGGGCGAGGACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCAAGTGCAACCTGCGCCGCCTGAGCGACTACCACAACCTGTCGAACTgg  <  1:723098/150‑1 (MQ=255)
                                                                                                                                              cTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCAAGTGCAACCTGCGCCGCCTGAGCGACTACCACAACCTGTCGAACTgg  >  1:1445671/1‑150 (MQ=255)
                                                                                                                                               |                                                                                                                                                    
CCGACCATCGAAGCACTGAACGAGCGCATCTACCCGGCGGTGAACAACGGTGTGTAC‑CGCGCAGGCTTTGCTACCACGCAAGACGCTTACGAGGCTGCCTTTGAGGATGTGTTCAACGAGCTGGATTACCTGGAGGCCTTGCTAGGCCGCAATCGCTACCTGGCGGGCGAGTACCTGACCGAGGCTGATGTACGCCTGTTCACTACACTGGTGCGCTTCGATGCCGTGTACCACGGGCACTTCAAGTGCAACCTGCGCCGCCTGAGCGACTACCACAACCTGTCGAACTGG  >  NC_002947/4506850‑4507140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑