| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,666,358 | G→C | 7.6% | S26S (TCG→TCC) | nuoL → | NADH‑quinone oxidoreductase subunit L |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,666,358 | 0 | G | C | 7.6% | 371.4 / 17.5 | 121 | S26S (TCG→TCC) | nuoL | NADH‑quinone oxidoreductase subunit L |
| Reads supporting (aligned to +/- strand): ref base G (61/49); new base C (3/6); total (65/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.48e-01 | |||||||||||
Only 100 of 125 total aligned reads displayed.
TGGCCATCCTGCTGCAGCTGTATCGCCGCTTCCACACTCTCGACATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTC > NC_002947/4666211‑4666505 | tggccATCCTGCTGCAGCTGTATCGCCGCTTCCACACTCTCGACATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGga < 1:1957249/150‑1 (MQ=255) ccATCCTGCTGCAGCTGTATCGCCGCTTCCACACTCTCGACATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGaa < 1:1647558/150‑1 (MQ=255) tCCTGCTGCAGCTGTATCGCCGCTTCCACACTCTCGACATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCt > 1:31697/1‑150 (MQ=255) tCCTGCTGCAGCTGTATCGCCGCTTCCACACTCTCGACATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCt > 1:1096060/1‑150 (MQ=255) tgcAGCTGTATCGCCGCTTCCACACTCTCGACATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGATCCTGTcccc < 2:1911995/150‑3 (MQ=255) cAGCTGTATCGCCGCTTCCACACTCTCGACATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGccc > 1:1415582/1‑150 (MQ=255) cAGCTGTATCGCCGCTTCCACACTCTCGACATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGcc < 2:165689/149‑1 (MQ=255) cAGCTGTATCGCCGCTTCCACACTCTCGACATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGcc > 1:165689/1‑149 (MQ=255) aGCTGTATCGCCGCTTCCACACTCTCGACATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCt > 2:1415732/1‑150 (MQ=255) cTGTATCGCCGCTTCCACACTCTCGACATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGa < 2:209417/150‑1 (MQ=255) cTGTATCGCCGCTTCCACACTCTCGACATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGAATTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGa < 2:1655830/150‑1 (MQ=255) tATCGCCGCTTCCACACTCTCGACATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCg > 1:1513081/1‑150 (MQ=255) tCGCCGCTTCCACACTCTCGACATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGTGCGGAC‑GGTTCTCAGAGAACCTGTCCGAGCTGATCGGc > 1:834972/1‑150 (MQ=255) tCGCCGCTTCCACACTCTCGACATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGc > 1:287318/1‑150 (MQ=255) gccgcTTCCACACTCTCGACATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGACAGGTTCTCCGAGAAccgt < 2:1543667/134‑3 (MQ=255) gccgcTTCCACACTCTCGACATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGACAGGTTCTCCGAGAAccgt > 1:1543667/1‑132 (MQ=255) ccgcTTCCACACTCTCGACATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAG‑GGTTCTCGGAGAAAATGTGCGCCCTGATTGGCGTc > 1:721114/1‑150 (MQ=255) ccgcTTCCACACTCTCGACATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTc > 2:1039943/1‑150 (MQ=255) ttCCACACTCTCGACATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCNGCt < 2:1513081/150‑1 (MQ=255) tctcGACATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCGCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGc < 2:1067562/150‑1 (MQ=255) tcGACATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCt > 2:139740/1‑150 (MQ=255) aCATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGga < 2:2424095/108‑1 (MQ=255) aCATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGga > 1:2424095/1‑108 (MQ=255) aCATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTc < 2:1340490/150‑1 (MQ=255) aTCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAAc < 1:578210/110‑1 (MQ=255) gATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGGGCGGACAGGTTCTCCGAGAAccgt > 1:1253425/1‑109 (MQ=255) aTGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGgccgc > 1:547151/1‑150 (MQ=255) tgctgcCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGgccgcc > 1:2079095/1‑150 (MQ=255) gTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGgccgc < 1:472591/150‑1 (MQ=255) gctGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTAc < 1:822312/148‑1 (MQ=255) gaTGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTAc < 1:2356812/150‑1 (MQ=255) aTGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACg > 1:2273804/1‑150 (MQ=255) gcgGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCAt > 2:1926111/1‑150 (MQ=255) ggATGAACGTGCTCTGCCTGGGGTTGGTCTTTGCCCTCATCGGCTTCCTGCTGCTGTGGTTCTCGCGCGGAC‑GGTTCTCTGAGAACCTGTCCGCCCTGATCGGCGTCTGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCt < 2:1093393/150‑1 (MQ=255) ggATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCt < 1:1917872/150‑1 (MQ=255) gATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTg > 2:643392/1‑150 (MQ=255) gAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGt < 1:117177/102‑1 (MQ=255) aCCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCa > 2:2237822/1‑148 (MQ=255) ccTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGt < 1:2181700/83‑1 (MQ=255) cTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAAc < 2:1565497/78‑1 (MQ=255) ctctTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAAc < 2:1459253/150‑1 (MQ=255) ctctTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAAc < 2:728313/150‑1 (MQ=255) tctTCCTGACTTTCGTCTTTCCCCTCATCGGCTTGCTGATGCTGTGGTTAAAGTTCGTAC‑GGGGCTCGGAGAACTTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACg > 1:646629/1‑150 (MQ=255) ttCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGt > 2:484313/1‑76 (MQ=255) ttCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGt < 1:484313/76‑1 (MQ=255) ttCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAAc < 2:550647/147‑1 (MQ=255) tCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAG‑GGTTCTCGGAGACCCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCg < 1:862440/150‑1 (MQ=255) cTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGga > 1:222/1‑65 (MQ=255) cTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGga < 2:222/65‑1 (MQ=255) ttCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGc > 2:1200788/1‑96 (MQ=255) ttCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGc < 1:1200788/96‑1 (MQ=255) ttCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCt < 2:803986/118‑1 (MQ=255) ttCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCt > 1:803986/1‑118 (MQ=255) gTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGACAGGTTCTCCGAGAAccgtc < 2:268964/65‑4 (MQ=25) gTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGACAGGTTCTCCGAGAAccgtc > 1:268964/1‑62 (MQ=25) gTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAg > 2:648294/1‑150 (MQ=255) tCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAgg < 2:598517/150‑1 (MQ=255) cTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAggg < 2:646629/150‑1 (MQ=255) cccTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGgcggcg > 1:547391/1‑150 (MQ=255) ccTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTCCATCCCTCGGCAGTTCAACGTCGCCCCGCCTGAGGGCGgcgc > 2:1146143/1‑150 (MQ=255) ccTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGgcgc > 2:1237647/1‑150 (MQ=255) ccTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGgcgc > 2:1951405/1‑150 (MQ=255) ccTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGgcgc > 2:1212516/1‑150 (MQ=255) ccTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGgcgc > 2:1960498/1‑150 (MQ=255) tCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGt < 1:648294/150‑1 (MQ=255) tCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTc < 2:246962/119‑1 (MQ=255) tCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTAca > 1:206237/1‑150 (MQ=255) tCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTAca > 2:1169644/1‑150 (MQ=255) ggCTTCCTGCGGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTAcagc > 2:2161174/1‑150 (MQ=255) ttCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAAc < 1:1067620/117‑1 (MQ=255) ttCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAAc > 2:1067620/1‑117 (MQ=255) ttCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTAcagccag > 2:1291198/1‑150 (MQ=255) ttCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTAcagccag > 2:749960/1‑150 (MQ=255) ttCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTAcagccag > 1:1652816/1‑150 (MQ=255) tCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGgcc < 1:2409966/72‑1 (MQ=255) tCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGgcc > 2:2409966/1‑72 (MQ=255) tCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAg > 1:1468692/1‑150 (MQ=255) gTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCGTTGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTg < 1:1146143/150‑1 (MQ=255) ttCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTgg > 2:819663/1‑150 (MQ=255) ttCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTgg > 2:562854/1‑150 (MQ=255) tcGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATg > 2:446800/1‑150 (MQ=255) gcgGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGTCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCgg < 1:1622914/150‑1 (MQ=255) cgGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGt < 2:1872315/150‑1 (MQ=255) cgGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGt < 1:1926111/150‑1 (MQ=255) cgGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTATACGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGt < 1:392552/150‑1 (MQ=255) ggAC‑GGTTCTCGGAGAACCTGTCGGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTg > 2:1193293/1‑150 (MQ=255) ggAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGtt > 1:2097321/1‑89 (MQ=255) ggAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGtt < 2:2097321/89‑1 (MQ=255) ggTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACg > 2:2190472/1‑150 (MQ=255) ttCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGc < 1:2149771/45‑1 (MQ=255) ttCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGc > 2:2149771/1‑45 (MQ=255) tctcGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCt > 1:2236784/1‑150 (MQ=255) ctcGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCtt > 1:1982638/1‑150 (MQ=255) tcGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTc < 2:2273804/150‑1 (MQ=255) tcGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTc > 2:172296/1‑150 (MQ=255) tcGGAGAACCTGTACGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCtgtg < 2:1081185/125‑1 (MQ=255) tcGGAGAACCTGTACGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCtgtg > 1:1081185/1‑125 (MQ=255) ggAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGccc < 2:1033561/89‑1 (MQ=255) ggAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGccc > 1:1033561/1‑89 (MQ=255) ggAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTAcag < 1:1897143/111‑1 (MQ=255) | TGGCCATCCTGCTGCAGCTGTATCGCCGCTTCCACACTCTCGACATCGATGCTGCCAGTGAGATGCGCGGATGAACCTTCTCTTCCTGACTTTCGTCTTTCCCCTCATCGGCTTCCTGCTGCTGTCGTTCTCGCGCGGAC‑GGTTCTCGGAGAACCTGTCCGCCCTGATCGGCGTCGGCTCGGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTC > NC_002947/4666211‑4666505 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |