| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,762,027 | T→A | 5.3% | V214D (GTC→GAC) | pvdN → | pyoverdine biosynthesis‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,762,027 | 0 | T | A | 5.3% | 341.1 / 7.4 | 114 | V214D (GTC→GAC) | pvdN | pyoverdine biosynthesis‑like protein |
| Reads supporting (aligned to +/- strand): ref base T (53/54); new base A (3/3); total (56/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.25e-01 | |||||||||||
Only 100 of 115 total aligned reads displayed.
ACCCAGGTGCGCAAGCTACGCCTGTTCGACGACCCGGCCAAGGTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATGCGCTTCGCCGACCTGCAGTGTGACTACTTCATCGCCGGCACCC > NC_002947/4761879‑4762176 | aCCCAGGTGCGCAAGCTACGCCTGTTCGACGACCCGGCCAAGGTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTc > 2:97842/1‑150 (MQ=255) cccAGGTGCGCAAGCTACGCCTGTTCGACGACCCGGCCCGTCGGTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCg < 1:24089/150‑1 (MQ=255) ccAGGTGCGCAAGCTACGCCTGTTCGACGACCCGGCCAAGGTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCgg < 2:1929018/150‑1 (MQ=255) aGGTGCGCAAGCTACGCCTGTTCGACGACCCGGCCAAGGTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGc < 1:395096/150‑1 (MQ=255) aGGTGCGCAAGCTACGCCTGTTCGACGAAACGGCCAAGGGCTCCGACGACCGGTGACGAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGACGGGc > 1:299845/1‑150 (MQ=255) gcgcAAGCTACGCCTGTTCGACGACCCGGCCAAGGTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGACGGGCAgtt < 2:299845/150‑3 (MQ=255) gcgcAAGCTACGCCTGTTCGACGACCCGGCCAAGGTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGACGGGCAgtt < 1:733196/150‑3 (MQ=255) cgcAAGCTACGCCTGTTCGACGACCCGGCCAAGGTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATc < 1:2220894/150‑1 (MQ=255) gCTACGCCTGTTCGACGACCCGGCCAAGGTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCg > 2:628174/1‑137 (MQ=255) gCTACGCCTGTTCGACGACCCGGCCAAGGTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCg < 1:628174/137‑1 (MQ=255) cGCCTGTTCGACGACCCGGCCAAGGTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTg < 2:1083174/150‑1 (MQ=255) gCCTGTTCGACGACCCGGCCAAGGTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCCAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTgg > 2:573461/1‑150 (MQ=255) gCCTGTTCGACGACCCGGCCAAGGTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTgg < 1:1502650/150‑1 (MQ=255) gCCTGTTCGACGACCCGGCCAAGGTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGAAATCGA‑CGCGAGGCATGACCTGGGTGCATTCAGGCAGTGGCATGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTgg > 1:1002064/1‑150 (MQ=255) gTTCGACGACCCGGCCAAGGTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCa > 1:1748626/1‑150 (MQ=255) ttCGACGACCCGGCCAAGGTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCCTCAAGCCGCAGAGCCGGG‑GGCTGGGCATGACATGGGTACCAGCATACATTGGTTTGAAACTTCCCGTCGAGCAGATC‑GGCGCCCTGGTCCAc > 1:1742722/1‑150 (MQ=255) gacgacCCGGCCAAGGTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAg < 2:334902/150‑1 (MQ=255) ccGGCCAAGGTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCcaac > 1:30600/1‑150 (MQ=255) ccGGCCAAGGTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCcaac < 1:1220417/150‑1 (MQ=255) cGGCCAAGGTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCcaacc < 2:1836466/150‑1 (MQ=255) ccAAGGTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCcaaccgca > 1:2119483/1‑150 (MQ=255) aaGGTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGTGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCcaaccgcaac > 2:600564/1‑150 (MQ=255) aaGGTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCcaaccgcaac > 2:1185084/1‑150 (MQ=255) gTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGTGTGCATTCAGGCAGAGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGt > 1:907290/1‑150 (MQ=255) tctcCGACGACCAGGTACTAAGCACCATTGCTTCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCAc < 2:662524/131‑1 (MQ=255) tctcCGACGACCAGGTACTAAGCACCATTGCTTCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCAc > 1:662524/1‑131 (MQ=255) tcCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCGAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGAc > 1:301627/1‑150 (MQ=255) cgacgaCCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGa > 2:891645/1‑150 (MQ=255) acgacCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCg < 2:1817741/102‑1 (MQ=255) acgacCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCg > 1:1817741/1‑102 (MQ=255) acgacCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGaaa < 1:308825/150‑1 (MQ=255) ccAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGa > 1:1875435/1‑150 (MQ=255) ccAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGa < 1:2020097/150‑1 (MQ=255) cAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCATCCGTGACGAAAACGAc > 2:1223791/1‑150 (MQ=255) aGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGCGGCCAACCGCAACCGTGACGAAAACGAcc > 1:507679/1‑150 (MQ=255) aGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGAcc < 1:689124/150‑1 (MQ=255) gTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCCGCCGCGTGAAACTGCCTGTCTGGCATATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGc < 1:886414/150‑1 (MQ=255) cTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATc < 2:637796/150‑1 (MQ=255) tAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGcc < 1:1734298/104‑1 (MQ=255) tAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATcc > 2:1751474/1‑150 (MQ=255) aGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCctc > 1:1851440/1‑150 (MQ=255) cACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCNCTa < 2:1518475/150‑1 (MQ=255) aCCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCa > 2:1581993/1‑89 (MQ=255) aCCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCa < 1:1581993/89‑1 (MQ=255) aCCATTGCTGCCGCCATCAAGCCGCAGAACCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTAc > 1:66753/1‑150 (MQ=255) tgcCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCAc < 1:1377961/100‑1 (MQ=255) gccgccATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGAt > 2:751056/1‑150 (MQ=255) ccgccATCAAGCCGCCG‑CAATTGTTGCTGTGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATg < 1:122399/150‑1 (MQ=255) ccATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGAt < 2:562607/146‑1 (MQ=255) aaGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCAc < 2:170740/150‑1 (MQ=255) gCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAg > 1:355431/1‑91 (MQ=255) gCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAg < 2:355431/91‑1 (MQ=255) gCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCtt < 2:2119483/150‑1 (MQ=255) cAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTc < 2:1875435/150‑1 (MQ=255) cAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCAG‑CGCCGTGGTCTTACTTCCTGGTCCACGAGGCCAACAGCAACAGTGCCGCTAATGACCGGATCCTCTACGTGATCGATGGCGTGCACGGCTTc < 1:1751474/150‑1 (MQ=255) aCCCGTG‑TGCTGGGCATGACCTGGGTGCATTCATTCAGGGGCGTGAACCTGCCCGTCACGCAACGC‑GAGATTTTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGc < 1:1223791/150‑1 (MQ=255) aCCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCcaac > 2:381482/1‑90 (MQ=255) aCCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCcaac < 1:381482/90‑1 (MQ=255) ccGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCcaaccgc < 2:1272649/91‑1 (MQ=255) ccGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCcaaccgc > 1:1272649/1‑91 (MQ=255) ccGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATgg < 2:729886/132‑1 (MQ=255) ccGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATgg > 1:729886/1‑132 (MQ=255) ccGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGt < 2:186941/150‑1 (MQ=255) g‑tgCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGaa < 1:990987/150‑1 (MQ=255) g‑tgCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTCGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGaa < 1:1605941/150‑1 (MQ=255) cTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGa < 2:125449/92‑1 (MQ=255) cTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGa > 1:125449/1‑92 (MQ=255) cTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGAc > 1:1692906/1‑150 (MQ=255) tGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAATCGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACa > 2:1302158/1‑150 (MQ=255) tGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACa > 2:1527863/1‑150 (MQ=255) gggCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCATGTCTTCGACGCCGAAgccgt < 2:1748626/150‑5 (MQ=255) gCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATgc > 1:1062740/1‑150 (MQ=255) gCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATgc > 1:1669047/1‑150 (MQ=255) aTGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATgcgc > 1:2402264/1‑150 (MQ=255) aCCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATGCGCTTc < 2:1669047/150‑1 (MQ=255) cTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATGCGCTTCGc < 1:573461/150‑1 (MQ=255) cTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATGCGCTTCGc > 2:1796196/1‑150 (MQ=255) tGGGTGCATCCAGGAAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATGCGCTTCGcc < 2:2290439/150‑1 (MQ=255) gggTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTAc < 1:1415986/101‑1 (MQ=255) gggTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTAc > 2:1415986/1‑101 (MQ=255) cATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGt < 2:305813/72‑1 (MQ=255) aTTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATGCGCTTCGCCGACCTGc > 2:892568/1‑150 (MQ=255) aTTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATGCGCTTCGCCGACCTGc > 1:815155/1‑150 (MQ=255) ttCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATGCGCTTCGCCGACCTGCa > 1:286069/1‑150 (MQ=255) ttCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATGCGCTTCGCCGACCTGCa < 2:30600/150‑1 (MQ=255) ttCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCACCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATGCGCTTCGCCGACCTGCa > 2:1220854/1‑150 (MQ=255) tCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATGCGCTTCGCCGACCTGCAg < 1:2447114/150‑1 (MQ=255) ggCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATGCGCTTCGCCGACCTGCAgtgt < 1:97842/150‑1 (MQ=255) gCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATGCGCTTCGCCGACCTGCAGTGTGactact > 1:266426/1‑150 (MQ=255) gTGAAACTGCCCGTCGGGCAGATC‑GGGCCCCTGGGCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATGCGCTTCGCCGACCTGCAGTGTGACTACTTc < 2:301627/150‑1 (MQ=255) gTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGAt > 1:849273/1‑86 (MQ=255) gTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGAt < 2:849273/86‑1 (MQ=255) gTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATGCGCTTCGCCGACCTGCAGTGTGACTACTTc < 1:1527863/150‑1 (MQ=255) gTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTAGGCATCGAAGACATGCTCTTCGCCGACCTGCAGTGTGACTACTTc > 2:1591601/1‑150 (MQ=255) atcTGCCCGACGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATGCGCTTCGCCGACCTGCAGTGTGACTACTTCATCg > 2:1835786/3‑150 (MQ=255) tGCCCGACGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATGCGCTTCGCCGACCTGCAGTGTGACTACTTCATCGCCg < 1:1835786/150‑1 (MQ=255) gCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATGCGCTTCGCCGACCTGCAGTGTGACTACTTCATCGCCgg > 1:1350474/1‑150 (MQ=255) ccGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATGCGCTTCGCCGGCCTGCAGTGTGACTACTTCATCgagatcg > 2:1751343/1‑144 (MQ=255) cGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATGCGCTTCGCCGACCTGCAGTGTGACTACTTCATCGCCGGCAc < 2:2402264/150‑1 (MQ=255) tCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATGCGCTTCGCCGACCTGCAGTGTGACTACTTCATCGCCGGCAccc > 2:53062/1‑150 (MQ=255) | ACCCAGGTGCGCAAGCTACGCCTGTTCGACGACCCGGCCAAGGTCTCCGACGACCAGGTACTAAGCACCATTGCTGCCGCCATCAAGCCGCAGACCCGTG‑TGCTGGGCATGACCTGGGTGCATTCAGGCAGTGGCGTGAAACTGCCCGTCGGGCAGATC‑GGCGCCCTGGTCCACGAGGCCAACCGCAACCGTGACGAAAACGACCGCATCCTCTACGTGATCGATGGCGTGCACGGCTTCGGCGTCGAAGACATGCGCTTCGCCGACCTGCAGTGTGACTACTTCATCGCCGGCACCC > NC_002947/4761879‑4762176 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |