| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,776,469 | A→T | 6.4% | L948Q (CTG→CAG) | pvdD ← | non‑ribosomal peptide synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,776,469 | 0 | A | T | 6.4% | 243.4 / 5.7 | 78 | L948Q (CTG→CAG) | pvdD | non‑ribosomal peptide synthetase |
| Reads supporting (aligned to +/- strand): ref base A (40/33); new base T (2/3); total (42/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01 | |||||||||||
GCGCCTTGCGGTCGAGCTTGCCGTTGGGGGTCAGCGGCATGCGT‑GGAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGCGCACCGCACCGAAGCCCTGCAGGCTGGCCTCGATCTCGCCCAACTCGATGCGGAAACCGCGAATCTTC > NC_002947/4776320‑4776618 | gcgcCTTGCGGTCGAGCTTGCCGTTGGGGGTCCGCGGCATGCGT‑GGAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTgca > 2:1343393/1‑150 (MQ=255)gcgcCTTGCGGTCGAGCTTGCCGTTGGGGGTCAGCGGCATGCGT‑GGCATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTgca < 1:145074/150‑1 (MQ=255) cTTGCGGTCGAGCTTGCCGTTGGGGGTCAGCGGCATGCGT‑GGAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGcagcag > 2:309348/1‑150 (MQ=255) ttGCGGTCGAGCTTGCCGTTGGGGGTCAGCGGCATGCGT‑GGAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAgg < 1:1444812/150‑1 (MQ=255) gTCGAGCTTGCCGTTGGGGGTCAGCGGCATGCGT‑GGAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGAGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCTGCAGGCTgat < 2:1908233/150‑3 (MQ=255) tCGAGCTTGCCGTTGGGGGTCAGCGGCATGCGT‑GGAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCa > 2:1889002/1‑150 (MQ=255) tCGAGCTTGCCGTTGGGGGTCAGCGGCATGCGT‑GGAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCa > 2:2165477/1‑150 (MQ=255) gAGCTTGCCGTTGGGGGTCAGCGGGAT‑CGTCTTAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATc < 1:1182230/150‑1 (MQ=255) gAGCTTGCCGTTGGGGGTCAGCGGCATGCGT‑GGAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATc > 2:1783417/1‑150 (MQ=255) gAGCTTGCCGTTGGGGGTCAGCGGCATGCGT‑GGAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATc > 1:1814498/1‑150 (MQ=255) cTTGCCGTTGGGGGTCAGCGGCATGCGT‑GGAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTa < 2:2287777/150‑1 (MQ=255) gCCGTTGGGGGTCAGCGGCATGCGT‑GGAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACgg > 1:1725239/1‑150 (MQ=255) cGTTGGGGGTCAGCGGCATGCGT‑GGAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGcc > 1:1719908/1‑149 (MQ=255) ttGGGGGTCAGCGGCATGCGT‑GGAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACg > 2:1025426/1‑150 (MQ=255) tCAGCGGCATGCGT‑GGAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGc > 2:688149/1‑150 (MQ=255) aGCGGCATGCGT‑GGAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGccc > 2:2329094/1‑149 (MQ=255) gCATGCGT‑GGAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCa < 1:201616/150‑1 (MQ=255) tGCGT‑GGAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGcagcag < 2:2044520/115‑1 (MQ=255) tGCGT‑GGAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGcagcag > 1:2044520/1‑115 (MQ=255) gAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGTCTGGCATCGTACGCCACGACGTAGCCGCCCAGCTGCTGGc > 2:1321962/1‑150 (MQ=255) aTGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGccc < 1:2165477/150‑1 (MQ=255) tGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCa < 2:1762032/150‑1 (MQ=255) acacCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCg < 1:309348/150‑1 (MQ=255) cacCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCgg < 2:1885950/150‑1 (MQ=255) acCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGc > 2:202924/1‑150 (MQ=255) cAGGTGGGTCGGCACCATGTAGTCCGGCCTAGACGTCGATGTTTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGccc < 2:2017015/150‑1 (MQ=255) cAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGTCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGccc < 1:1321962/150‑1 (MQ=255) cAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGccc > 2:800399/1‑150 (MQ=255) gTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCcgtc < 1:202924/150‑1 (MQ=255) tCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTACCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGTCTGCGAGCTGCTTGCCCAGCGGCCcgtcgacgt > 2:1232882/1‑150 (MQ=255) gCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCTGCAGGCTgatg < 2:1805274/95‑4 (MQ=255) gCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCTGCAGGCTgatg > 1:1805274/1‑92 (MQ=255) cACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATCGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGAt < 1:1232882/150‑1 (MQ=255) cATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGc < 1:870872/133‑1 (MQ=255) cATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGc > 2:870872/1‑133 (MQ=255) cATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCAc > 1:528860/1‑150 (MQ=255) gTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACTTCGATCACGGc < 1:1889002/150‑1 (MQ=255) gTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGc < 1:67676/150‑1 (MQ=255) cGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGGTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTAGCCGTCGATCACGGcccattc > 2:229670/1‑145 (MQ=255) aTCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCgcgc > 2:1315371/1‑150 (MQ=255) aCTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACg > 2:2247658/1‑134 (MQ=255) aCTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACg < 1:2247658/134‑1 (MQ=255) aaTGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGCGcaccgcaccg > 2:59716/1‑150 (MQ=255) aaTGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGCGcaccgcaccg > 2:1335762/1‑150 (MQ=255) gCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGCGCACCGCACCGAAg < 2:715830/150‑1 (MQ=255) tGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGc > 1:471756/1‑102 (MQ=255) tGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGc < 2:471756/102‑1 (MQ=255) gggCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGCGCACCGAACCGAAGCCCt > 1:1236434/1‑150 (MQ=255) gCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGCGCACCGCACCGAAGCCCTGc < 1:1928243/150‑1 (MQ=255) ccTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGCGCACCGCACCGAAGCCCTGCa > 2:1572771/1‑150 (MQ=255) gAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGCTCCCGGCCACTTCGCGCGCCGCACCGAAGCCCTGCAGGCt > 2:1331059/1‑150 (MQ=255) aGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGCGCACCGCACCGAAGCCCTGCAGGCTg < 2:1821872/150‑1 (MQ=255) tGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGCGCACCGCACCGAAGCCCTGCAGGCTGGc < 2:2328231/150‑1 (MQ=255) ccAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCa > 2:2057577/1‑87 (MQ=255) ccAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCa < 1:2057577/87‑1 (MQ=255) ccAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGGCCGTCGACGTCGATCACGGCCACTTCGCGCACCGAACCGAAGCCCTGCAGGCTGGCCt < 2:1236434/150‑1 (MQ=255) cAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGCCATCGTACGGCACGATATAGCCTGCCACGTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACCTCGCGCACCGCACCGAAGCCCTGCAGGCTGGCCTc < 1:1343393/150‑1 (MQ=255) aGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGccc > 2:1143738/1‑92 (MQ=255) aGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGccc < 1:1143738/92‑1 (MQ=255) aGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGCGCACCGCACCGAAGCCCTGCAGGCTGGCCTCg > 1:1976292/1‑150 (MQ=255) cgcAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGCGCACCGCACCGAAGCCCTGCAGGCTGGCCTCGAtc < 1:59716/150‑1 (MQ=255) gcAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGCCGTCGATCACGGCCACTTCGCGCACCGCACCGAAGCCCTGCAGGCTGGCCTCGAtct > 1:648673/1‑150 (MQ=255) aGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGCGCACCGAACCGTAGCCCTGCAGGCTGGCCTCGATCTCg < 1:1025426/150‑1 (MQ=255) agagccTGGACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGcgcaccgcac < 1:2311567/114‑1 (MQ=255) agagccTGGACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGcgcaccgcac > 2:2311567/5‑118 (MQ=255) tttCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGCCGTCGATCCCGGCCACTTCGCGCACCGAACCGAAGCCCCACAGGATGGCGTCGATCTCGcccc > 1:1158171/1‑149 (MQ=255) cTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGCGCACAGCACCGCAGCCCTGCAGGCTGGCGTAGGTATCGCCCAAATc > 1:1532745/1‑150 (MQ=255) cTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCACCTGCTTGCCCAGCGGCCCGTCGACGTCGACCACGGCCACTCCGCGCACCGCACCGAACCCCTGCAGGCTGGCCTCGATCTCGCCCCACTc > 1:1492886/1‑150 (MQ=255) tGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACgg < 1:654030/94‑1 (MQ=255) tGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACgg > 2:654030/1‑94 (MQ=255) gAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGCGCACCGCACCGAAGCCCTGCAGGCTGGCCTCGATCTCGCCCAACTCGa > 2:1439336/1‑150 (MQ=255) gAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGAGCACGGCCACTTCGCGCACCACACCGAACCCGGACGGGCTGGCGTCTGTCTCGCCCAACTCGa > 1:1978952/1‑150 (MQ=255) aaCCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGATGCTTGCCCAGCGGACCGTAGACGTCGATCACCGCAGCTCGGCGAACCGCACAACAGCGCGTCAGGCTGGCCTCGATCCAGCGCAACTCGag > 2:565080/1‑149 (MQ=255) tCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATCTAGCCTGCGAGCTGCTTGCACAGCGGCCCTCCGACGTCGATCACGGCCACTTGGCGCGCCGCACCGAAGCCCTGCAGGCTGGCCTCGATCCCGCCCAACTCGATGCgg > 1:1617460/1‑150 (MQ=255) tCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGCGCACCGCACCGAAGCCCTGCAGGCTGGCCTCGATCTCGCCCAACTCGATGccg > 1:2182564/1‑148 (MQ=255) cGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGCGCACCGCACCGAAGCCCTGCAGGCTGGCCTCGATCTCGCCCAACTCGATGCGGa < 2:1725239/150‑1 (MQ=255) cGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCACCGGCCCGTCGACGTCGAt < 1:2437973/82‑1 (MQ=255) cGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCCGCTTGCCCACCGGCCCGTCGACGTCGAt > 2:2437973/1‑82 (MQ=255) atgccAGCCTGCTGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGCGCACCGCACCGAAGCCCTGCAGGCTGGCCTCGATCTCGc < 2:1277982/129‑1 (MQ=255) atgccAGCCTGCTGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGCGCACCGCACCGAAGCCCTGCAGGCTGGCCTCGATCTCGc > 1:1277982/5‑133 (MQ=255) cATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGCGCACCGCACCGAAGCCCTGCAGGCTGGCCTCGATCTCGCCCAACTCGATGCGGAAAc < 1:1572771/150‑1 (MQ=255) aTCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGCGCATCGCACCGAAGCCCTGCAGGCTGGCCTCGATCTCGCCCAACTCGATGCGGAAAcc > 1:1459426/1‑150 (MQ=255) cAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGCGCACCGCACCGAAGCCCTGCAGGCTGGCCTCGATCTCGCCCAACTCGATGCGGAAACcgc < 2:648673/150‑1 (MQ=255) agcagGCTGGCATCGTACGGCACGATATAGCCTGCCCGGTGGTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGCGCACCGCACCGAAGCCCTGCAGGCTGGCCTCGATCTCGCCCAACTCGATGCGGAAACCGCGAATCTTc < 1:1204891/150‑1 (MQ=255) | GCGCCTTGCGGTCGAGCTTGCCGTTGGGGGTCAGCGGCATGCGT‑GGAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCAGGCTGGCATCGTACGGCACGATATAGCCTGCCAGCTGCTTGCCCAGCGGCCCGTCGACGTCGATCACGGCCACTTCGCGCACCGCACCGAAGCCCTGCAGGCTGGCCTCGATCTCGCCCAACTCGATGCGGAAACCGCGAATCTTC > NC_002947/4776320‑4776618 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |